Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm42795-201ENSMUST00000198847 76 ntBASIC2.3□□□□□ -2.04
Col17a1Q07563 Gm45544-201ENSMUST00000211130 88 ntBASIC2.3□□□□□ -2.04
Col17a1Q07563 Gm24162-201ENSMUST00000093665 102 ntBASIC2.3□□□□□ -2.04
Col17a1Q07563 Gm23528-201ENSMUST00000104571 132 ntBASIC2.29□□□□□ -2.04
Col17a1Q07563 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.29□□□□□ -2.04
Col17a1Q07563 Gm24770-201ENSMUST00000158505 92 ntBASIC2.29□□□□□ -2.04
Col17a1Q07563 Gm25160-201ENSMUST00000158914 102 ntBASIC2.29□□□□□ -2.04
Col17a1Q07563 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.29□□□□□ -2.04
Col17a1Q07563 Mir5124a-201ENSMUST00000175528 72 ntBASIC2.28□□□□□ -2.04
Col17a1Q07563 Mir6950-201ENSMUST00000184438 73 ntBASIC2.28□□□□□ -2.04
Col17a1Q07563 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.28□□□□□ -2.04
Col17a1Q07563 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.28□□□□□ -2.04
Col17a1Q07563 Gm26090-201ENSMUST00000157897 128 ntBASIC2.27□□□□□ -2.05
Col17a1Q07563 Gm25371-201ENSMUST00000158162 101 ntBASIC2.27□□□□□ -2.05
Col17a1Q07563 Gm23726-201ENSMUST00000178937 67 ntBASIC2.27□□□□□ -2.05
Col17a1Q07563 Snora20-201ENSMUST00000082703 128 ntBASIC2.27□□□□□ -2.05
Col17a1Q07563 Gm25697-201ENSMUST00000082902 98 ntBASIC2.27□□□□□ -2.05
Col17a1Q07563 Mir764-201ENSMUST00000103259 108 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm25322-201ENSMUST00000122556 104 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm24384-201ENSMUST00000122693 75 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm24378-201ENSMUST00000122699 106 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm22999-201ENSMUST00000157082 88 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm25884-201ENSMUST00000157782 62 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm24199-201ENSMUST00000157808 136 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm43865-201ENSMUST00000204721 127 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm44807-201ENSMUST00000206115 154 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm24536-201ENSMUST00000083144 107 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm22151-201ENSMUST00000116963 58 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Gm25552-201ENSMUST00000158081 91 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Mir6995-201ENSMUST00000183658 71 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 CT030166.3-201ENSMUST00000223203 193 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Mir5117-201ENSMUST00000083226 84 ntBASIC2.26□□□□□ -2.05
Col17a1Q07563 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC2.25□□□□□ -2.05
Col17a1Q07563 Gm23181-201ENSMUST00000158685 110 ntBASIC2.24□□□□□ -2.05
Col17a1Q07563 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.24□□□□□ -2.05
Col17a1Q07563 Gm44325-201ENSMUST00000196757 77 ntBASIC2.24□□□□□ -2.05
Col17a1Q07563 Snord118-201ENSMUST00000082965 135 ntBASIC2.24□□□□□ -2.05
Col17a1Q07563 Gm19118-201ENSMUST00000222554 98 ntBASIC2.23□□□□□ -2.05
Col17a1Q07563 Gm24038-201ENSMUST00000082872 159 ntBASIC2.23□□□□□ -2.05
Col17a1Q07563 Gm24412-201ENSMUST00000083426 109 ntBASIC2.23□□□□□ -2.05
Col17a1Q07563 Gm24868-201ENSMUST00000157265 136 ntBASIC2.22□□□□□ -2.05
Col17a1Q07563 Gm24000-201ENSMUST00000158063 89 ntBASIC2.22□□□□□ -2.05
Col17a1Q07563 Gm22732-201ENSMUST00000158093 121 ntBASIC2.22□□□□□ -2.05
Col17a1Q07563 Gm24077-201ENSMUST00000158183 136 ntBASIC2.22□□□□□ -2.05
Col17a1Q07563 Gm26073-201ENSMUST00000179906 127 ntBASIC2.22□□□□□ -2.05
Col17a1Q07563 Gm42935-201ENSMUST00000202004 151 ntBASIC2.22□□□□□ -2.05
Col17a1Q07563 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.22□□□□□ -2.05
Col17a1Q07563 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.21□□□□□ -2.06
Col17a1Q07563 Gm24555-201ENSMUST00000104548 124 ntBASIC2.21□□□□□ -2.06
Col17a1Q07563 Snora24-201ENSMUST00000174989 130 ntBASIC2.21□□□□□ -2.06
Col17a1Q07563 Gm45471-201ENSMUST00000211270 281 ntBASIC2.21□□□□□ -2.06
Col17a1Q07563 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.2□□□□□ -2.06
Col17a1Q07563 Gm22431-201ENSMUST00000158545 107 ntBASIC2.2□□□□□ -2.06
Col17a1Q07563 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col17a1Q07563 Gm25855-201ENSMUST00000082787 72 ntBASIC2.2□□□□□ -2.06
Col17a1Q07563 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col17a1Q07563 Gm24579-201ENSMUST00000103964 144 ntBASIC2.2□□□□□ -2.06
Col17a1Q07563 Gm26105-201ENSMUST00000157253 190 ntBASIC2.2□□□□□ -2.06
Col17a1Q07563 Mir6379-201ENSMUST00000183392 115 ntBASIC2.2□□□□□ -2.06
Col17a1Q07563 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col17a1Q07563 Gm6293-201ENSMUST00000050339 195 ntBASIC2.2□□□□□ -2.06
Col17a1Q07563 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col17a1Q07563 Gm24701-201ENSMUST00000101946 105 ntBASIC2.19□□□□□ -2.06
Col17a1Q07563 Mir880-201ENSMUST00000104809 78 ntBASIC2.19□□□□□ -2.06
Col17a1Q07563 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col17a1Q07563 Gm22815-201ENSMUST00000157451 62 ntBASIC2.19□□□□□ -2.06
Col17a1Q07563 Gm25375-201ENSMUST00000158157 135 ntBASIC2.19□□□□□ -2.06
Col17a1Q07563 Gm26123-201ENSMUST00000083363 135 ntBASIC2.19□□□□□ -2.06
Col17a1Q07563 Gm23344-201ENSMUST00000083818 68 ntBASIC2.19□□□□□ -2.06
Col17a1Q07563 Gm26339-201ENSMUST00000102368 99 ntBASIC2.18□□□□□ -2.06
Col17a1Q07563 Gm23983-201ENSMUST00000157142 114 ntBASIC2.18□□□□□ -2.06
Col17a1Q07563 Gm22731-201ENSMUST00000158086 94 ntBASIC2.18□□□□□ -2.06
Col17a1Q07563 Gm23893-201ENSMUST00000158106 134 ntBASIC2.18□□□□□ -2.06
Col17a1Q07563 Gm16550-201ENSMUST00000162550 126 ntBASIC2.17□□□□□ -2.06
Col17a1Q07563 Gm25618-201ENSMUST00000179484 107 ntBASIC2.17□□□□□ -2.06
Col17a1Q07563 AC160550.1-201ENSMUST00000228659 181 ntBASIC2.17□□□□□ -2.06
Col17a1Q07563 Gm23299-201ENSMUST00000082708 79 ntBASIC2.17□□□□□ -2.06
Col17a1Q07563 Gm26398-201ENSMUST00000179015 127 ntBASIC2.16□□□□□ -2.06
Col17a1Q07563 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.16□□□□□ -2.06
Col17a1Q07563 Mir29c-201ENSMUST00000083614 88 ntBASIC2.16□□□□□ -2.06
Col17a1Q07563 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col17a1Q07563 Mir669f-201ENSMUST00000103850 121 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm25759-201ENSMUST00000103988 129 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm6954-201ENSMUST00000117416 225 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm13577-201ENSMUST00000121365 205 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm24880-201ENSMUST00000158776 85 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm45386-201ENSMUST00000210194 218 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm25635-201ENSMUST00000082675 131 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm24165-201ENSMUST00000082718 128 ntBASIC2.15□□□□□ -2.06
Col17a1Q07563 Gm23180-201ENSMUST00000158686 125 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm25798-201ENSMUST00000082641 107 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm25899-201ENSMUST00000082672 141 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm24151-201ENSMUST00000082758 141 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm11856-201ENSMUST00000118712 276 ntBASIC2.14□□□□□ -2.07
Col17a1Q07563 Gm24381-201ENSMUST00000122697 104 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 140.5 ms