Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mir532-201ENSMUST00000093630 96 ntBASIC0.87□□□□□ -2.27
NcanP55066 Gm24431-201ENSMUST00000104073 66 ntBASIC0.86□□□□□ -2.27
NcanP55066 Gm24509-201ENSMUST00000157086 101 ntBASIC0.86□□□□□ -2.27
NcanP55066 Gm25358-201ENSMUST00000157189 101 ntBASIC0.86□□□□□ -2.27
NcanP55066 Gm22887-201ENSMUST00000178586 107 ntBASIC0.86□□□□□ -2.27
NcanP55066 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.86□□□□□ -2.27
NcanP55066 Gm24047-201ENSMUST00000102405 104 ntBASIC0.85□□□□□ -2.27
NcanP55066 Gm6272-201ENSMUST00000121256 171 ntBASIC0.85□□□□□ -2.27
NcanP55066 Gm23605-201ENSMUST00000157255 127 ntBASIC0.85□□□□□ -2.27
NcanP55066 Gm23838-201ENSMUST00000158067 162 ntBASIC0.85□□□□□ -2.27
NcanP55066 Gm25772-201ENSMUST00000158574 56 ntBASIC0.85□□□□□ -2.27
NcanP55066 Gm25367-201ENSMUST00000158846 106 ntBASIC0.85□□□□□ -2.27
NcanP55066 Gm38298-201ENSMUST00000193578 118 ntBASIC0.85□□□□□ -2.27
NcanP55066 Mir7657-201ENSMUST00000196051 57 ntBASIC0.85□□□□□ -2.27
NcanP55066 Snord64-201ENSMUST00000104003 67 ntBASIC0.84□□□□□ -2.27
NcanP55066 Gm15289-201ENSMUST00000117793 244 ntBASIC0.84□□□□□ -2.27
NcanP55066 Mir6369-201ENSMUST00000183772 106 ntBASIC0.84□□□□□ -2.27
NcanP55066 Mir6380-201ENSMUST00000184334 81 ntBASIC0.84□□□□□ -2.27
NcanP55066 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.84□□□□□ -2.27
NcanP55066 Gm25610-201ENSMUST00000104016 129 ntBASIC0.83□□□□□ -2.28
NcanP55066 Gm22451-201ENSMUST00000122803 151 ntBASIC0.83□□□□□ -2.28
NcanP55066 Gm25623-201ENSMUST00000157216 108 ntBASIC0.83□□□□□ -2.28
NcanP55066 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.83□□□□□ -2.28
NcanP55066 Gm25091-201ENSMUST00000103997 71 ntBASIC0.82□□□□□ -2.28
NcanP55066 Gm23044-201ENSMUST00000157891 100 ntBASIC0.82□□□□□ -2.28
NcanP55066 Gm22381-201ENSMUST00000158186 107 ntBASIC0.82□□□□□ -2.28
NcanP55066 Gm22801-201ENSMUST00000175624 84 ntBASIC0.82□□□□□ -2.28
NcanP55066 Gm44301-201ENSMUST00000200362 143 ntBASIC0.82□□□□□ -2.28
NcanP55066 Gm15654-201ENSMUST00000152660 300 ntBASIC0.81□□□□□ -2.28
NcanP55066 Gm25329-201ENSMUST00000158041 126 ntBASIC0.81□□□□□ -2.28
NcanP55066 Gm16550-201ENSMUST00000162550 126 ntBASIC0.81□□□□□ -2.28
NcanP55066 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.81□□□□□ -2.28
NcanP55066 Gm24616-201ENSMUST00000083274 139 ntBASIC0.81□□□□□ -2.28
NcanP55066 Snord35a-201ENSMUST00000083884 90 ntBASIC0.81□□□□□ -2.28
NcanP55066 Gm24605-201ENSMUST00000104772 96 ntBASIC0.8□□□□□ -2.28
NcanP55066 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.8□□□□□ -2.28
NcanP55066 Gm24842-201ENSMUST00000158681 54 ntBASIC0.8□□□□□ -2.28
NcanP55066 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.8□□□□□ -2.28
NcanP55066 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.8□□□□□ -2.28
NcanP55066 Gm24030-201ENSMUST00000083931 164 ntBASIC0.8□□□□□ -2.28
NcanP55066 Gm24916-201ENSMUST00000157287 79 ntBASIC0.79□□□□□ -2.28
NcanP55066 Gm24728-201ENSMUST00000158226 125 ntBASIC0.79□□□□□ -2.28
NcanP55066 Mir3079-201ENSMUST00000175428 90 ntBASIC0.79□□□□□ -2.28
NcanP55066 Gm24575-201ENSMUST00000175502 77 ntBASIC0.79□□□□□ -2.28
NcanP55066 Gm42935-201ENSMUST00000202004 151 ntBASIC0.79□□□□□ -2.28
NcanP55066 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.79□□□□□ -2.28
NcanP55066 Gm23138-201ENSMUST00000083365 103 ntBASIC0.79□□□□□ -2.28
NcanP55066 Gm25006-201ENSMUST00000083813 107 ntBASIC0.79□□□□□ -2.28
NcanP55066 Gm26274-201ENSMUST00000157103 321 ntBASIC0.78□□□□□ -2.28
NcanP55066 Gm23434-201ENSMUST00000157179 100 ntBASIC0.78□□□□□ -2.28
NcanP55066 Mir15a-201ENSMUST00000175266 84 ntBASIC0.78□□□□□ -2.28
NcanP55066 Gm8034-201ENSMUST00000178853 132 ntBASIC0.78□□□□□ -2.28
NcanP55066 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
NcanP55066 Mir30f-201ENSMUST00000196073 92 ntBASIC0.78□□□□□ -2.28
NcanP55066 DQ267101-201ENSMUST00000082562 73 ntBASIC0.78□□□□□ -2.28
NcanP55066 Scarna9-201ENSMUST00000104318 70 ntBASIC0.77□□□□□ -2.29
NcanP55066 Gm25968-201ENSMUST00000157167 100 ntBASIC0.77□□□□□ -2.29
NcanP55066 Gm24547-201ENSMUST00000158649 149 ntBASIC0.77□□□□□ -2.29
NcanP55066 Mir3089-201ENSMUST00000175350 84 ntBASIC0.77□□□□□ -2.29
NcanP55066 Gm28767-201ENSMUST00000188601 114 ntBASIC0.77□□□□□ -2.29
NcanP55066 Mir33-201ENSMUST00000083531 69 ntBASIC0.77□□□□□ -2.29
NcanP55066 Gm25110-201ENSMUST00000116684 121 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm25775-201ENSMUST00000116716 121 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm24795-201ENSMUST00000116737 121 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm25171-201ENSMUST00000116926 121 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm12013-201ENSMUST00000121971 155 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm24913-201ENSMUST00000157286 107 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm22558-201ENSMUST00000157326 95 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm22708-201ENSMUST00000158987 103 ntBASIC0.76□□□□□ -2.29
NcanP55066 Traj61-201ENSMUST00000165025 72 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm37330-201ENSMUST00000192606 153 ntBASIC0.76□□□□□ -2.29
NcanP55066 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.76□□□□□ -2.29
NcanP55066 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.76□□□□□ -2.29
NcanP55066 Snord32a-201ENSMUST00000083285 83 ntBASIC0.76□□□□□ -2.29
NcanP55066 Mir224-201ENSMUST00000083608 82 ntBASIC0.76□□□□□ -2.29
NcanP55066 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
NcanP55066 Mir20b-201ENSMUST00000102087 80 ntBASIC0.75□□□□□ -2.29
NcanP55066 Gm38323-201ENSMUST00000192450 210 ntBASIC0.75□□□□□ -2.29
NcanP55066 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.75□□□□□ -2.29
NcanP55066 Gm23735-201ENSMUST00000082551 134 ntBASIC0.75□□□□□ -2.29
NcanP55066 Gm24705-201ENSMUST00000082808 107 ntBASIC0.75□□□□□ -2.29
NcanP55066 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
NcanP55066 Mir1899-201ENSMUST00000122798 96 ntBASIC0.74□□□□□ -2.29
NcanP55066 Gm16265-201ENSMUST00000134558 108 ntBASIC0.74□□□□□ -2.29
NcanP55066 Mir1933-201ENSMUST00000158930 88 ntBASIC0.74□□□□□ -2.29
NcanP55066 Gm26498-201ENSMUST00000177799 79 ntBASIC0.74□□□□□ -2.29
NcanP55066 Gm26230-201ENSMUST00000180141 79 ntBASIC0.74□□□□□ -2.29
NcanP55066 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.74□□□□□ -2.29
NcanP55066 Mir30a-201ENSMUST00000083471 71 ntBASIC0.74□□□□□ -2.29
NcanP55066 Gm22689-201ENSMUST00000102452 110 ntBASIC0.73□□□□□ -2.29
NcanP55066 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.73□□□□□ -2.29
NcanP55066 Gm24926-201ENSMUST00000178053 79 ntBASIC0.73□□□□□ -2.29
NcanP55066 Gm22632-201ENSMUST00000178266 79 ntBASIC0.73□□□□□ -2.29
NcanP55066 Gm38113-201ENSMUST00000193704 201 ntBASIC0.73□□□□□ -2.29
NcanP55066 Snord60-201ENSMUST00000082834 78 ntBASIC0.73□□□□□ -2.29
NcanP55066 Gm22772-201ENSMUST00000104451 121 ntBASIC0.72□□□□□ -2.29
NcanP55066 Gm22196-201ENSMUST00000116865 109 ntBASIC0.72□□□□□ -2.29
NcanP55066 Gm24963-201ENSMUST00000157916 144 ntBASIC0.72□□□□□ -2.29
NcanP55066 Gm25444-201ENSMUST00000158999 113 ntBASIC0.72□□□□□ -2.29
NcanP55066 Mir6390-201ENSMUST00000184405 129 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 138 ms