Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm26011-201ENSMUST00000104410 104 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Gm22030-201ENSMUST00000116942 63 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Gm24223-201ENSMUST00000158827 90 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Gm29535-201ENSMUST00000185723 109 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Gm28143-201ENSMUST00000191082 109 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Gm44602-201ENSMUST00000205948 132 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Gm18502-201ENSMUST00000218679 199 ntBASIC0.21□□□□□ -2.38
Traf1P39428 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.21□□□□□ -2.38
Traf1P39428 Gm16186-201ENSMUST00000120132 216 ntBASIC0.2□□□□□ -2.38
Traf1P39428 Gm25600-201ENSMUST00000158357 106 ntBASIC0.2□□□□□ -2.38
Traf1P39428 Gm24321-201ENSMUST00000175348 80 ntBASIC0.2□□□□□ -2.38
Traf1P39428 Mir7116-201ENSMUST00000195956 70 ntBASIC0.2□□□□□ -2.38
Traf1P39428 Gm24461-201ENSMUST00000082735 103 ntBASIC0.2□□□□□ -2.38
Traf1P39428 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.19□□□□□ -2.38
Traf1P39428 Gm23531-201ENSMUST00000104567 68 ntBASIC0.19□□□□□ -2.38
Traf1P39428 Gm22088-201ENSMUST00000158341 117 ntBASIC0.19□□□□□ -2.38
Traf1P39428 Gm24278-201ENSMUST00000104239 127 ntBASIC0.18□□□□□ -2.38
Traf1P39428 Gm26091-201ENSMUST00000122704 82 ntBASIC0.18□□□□□ -2.38
Traf1P39428 Gm23821-201ENSMUST00000158738 106 ntBASIC0.18□□□□□ -2.38
Traf1P39428 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.18□□□□□ -2.38
Traf1P39428 Mir6896-201ENSMUST00000198033 73 ntBASIC0.18□□□□□ -2.38
Traf1P39428 Mir1949-202ENSMUST00000199259 70 ntBASIC0.18□□□□□ -2.38
Traf1P39428 Gm25899-201ENSMUST00000082672 141 ntBASIC0.18□□□□□ -2.38
Traf1P39428 Gm23708-201ENSMUST00000104367 123 ntBASIC0.17□□□□□ -2.38
Traf1P39428 Gm24750-201ENSMUST00000157843 104 ntBASIC0.17□□□□□ -2.38
Traf1P39428 Gm23337-201ENSMUST00000158959 118 ntBASIC0.17□□□□□ -2.38
Traf1P39428 Mir3105-201ENSMUST00000175480 85 ntBASIC0.17□□□□□ -2.38
Traf1P39428 Gm37545-201ENSMUST00000186512 148 ntBASIC0.17□□□□□ -2.38
Traf1P39428 Gm43749-201ENSMUST00000199345 352 ntBASIC0.17□□□□□ -2.38
Traf1P39428 Gm25974-201ENSMUST00000158701 94 ntBASIC0.16□□□□□ -2.38
Traf1P39428 Mir1966-201ENSMUST00000158807 108 ntBASIC0.16□□□□□ -2.38
Traf1P39428 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Traf1P39428 Gm22973-201ENSMUST00000083298 191 ntBASIC0.16□□□□□ -2.38
Traf1P39428 Gm23661-201ENSMUST00000122630 87 ntBASIC0.15□□□□□ -2.39
Traf1P39428 Gm22541-201ENSMUST00000158165 127 ntBASIC0.15□□□□□ -2.39
Traf1P39428 Gm24106-201ENSMUST00000175498 127 ntBASIC0.15□□□□□ -2.39
Traf1P39428 Snora75-201ENSMUST00000082903 133 ntBASIC0.15□□□□□ -2.39
Traf1P39428 Mir669b-201ENSMUST00000102172 97 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm25040-201ENSMUST00000103877 66 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm24374-201ENSMUST00000104394 106 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Snord72-201ENSMUST00000104549 81 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Snord90-201ENSMUST00000104568 111 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm25680-201ENSMUST00000116917 126 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm22635-201ENSMUST00000116962 126 ntBASIC0.14□□□□□ -2.39
Traf1P39428 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm24129-201ENSMUST00000158537 97 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm23504-201ENSMUST00000158988 95 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm25952-201ENSMUST00000175329 74 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Gm27607-201ENSMUST00000185162 122 ntBASIC0.14□□□□□ -2.39
Traf1P39428 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.14□□□□□ -2.39
Traf1P39428 Mir216b-201ENSMUST00000102363 86 ntBASIC0.13□□□□□ -2.39
Traf1P39428 Mir670-201ENSMUST00000102380 100 ntBASIC0.13□□□□□ -2.39
Traf1P39428 Gm25408-201ENSMUST00000104104 133 ntBASIC0.13□□□□□ -2.39
Traf1P39428 Gm23482-201ENSMUST00000104172 122 ntBASIC0.13□□□□□ -2.39
Traf1P39428 Gm11694-201ENSMUST00000118637 159 ntBASIC0.13□□□□□ -2.39
Traf1P39428 Gm24246-201ENSMUST00000157315 132 ntBASIC0.13□□□□□ -2.39
Traf1P39428 Gm23994-201ENSMUST00000158059 88 ntBASIC0.13□□□□□ -2.39
Traf1P39428 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.13□□□□□ -2.39
Traf1P39428 Mir764-201ENSMUST00000103259 108 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Gm25943-201ENSMUST00000103791 90 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Gm24233-201ENSMUST00000104317 122 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Gm23761-201ENSMUST00000158347 104 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Gm23180-201ENSMUST00000158686 125 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Gm25285-201ENSMUST00000178951 90 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Gm42845-201ENSMUST00000197766 105 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Snord95-201ENSMUST00000082846 68 ntBASIC0.12□□□□□ -2.39
Traf1P39428 Gm13065-201ENSMUST00000119178 141 ntBASIC0.11□□□□□ -2.39
Traf1P39428 Traj61-201ENSMUST00000165025 72 ntBASIC0.11□□□□□ -2.39
Traf1P39428 Gm26398-201ENSMUST00000179015 127 ntBASIC0.11□□□□□ -2.39
Traf1P39428 Gm26202-201ENSMUST00000082910 65 ntBASIC0.11□□□□□ -2.39
Traf1P39428 Gm24524-201ENSMUST00000082925 170 ntBASIC0.11□□□□□ -2.39
Traf1P39428 Gm24073-201ENSMUST00000158177 106 ntBASIC0.1□□□□□ -2.39
Traf1P39428 Gm23260-201ENSMUST00000158317 172 ntBASIC0.1□□□□□ -2.39
Traf1P39428 Gm28001-201ENSMUST00000183561 117 ntBASIC0.1□□□□□ -2.39
Traf1P39428 Gm22303-201ENSMUST00000082686 122 ntBASIC0.1□□□□□ -2.39
Traf1P39428 Gm26168-201ENSMUST00000083787 112 ntBASIC0.1□□□□□ -2.39
Traf1P39428 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Gm24009-201ENSMUST00000157734 93 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Gm8034-201ENSMUST00000178853 132 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Mir669j-201ENSMUST00000179023 121 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Mir21c-201ENSMUST00000184910 78 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Gm38295-201ENSMUST00000191951 151 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Mir376b-201ENSMUST00000195930 82 ntBASIC0.09□□□□□ -2.4
Traf1P39428 Mir3967-201ENSMUST00000198710 68 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 197.3 ms