Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.54□□□□□ -2.16
Usp4P35123 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Usp4P35123 Gm44396-201ENSMUST00000199843 114 ntBASIC1.54□□□□□ -2.16
Usp4P35123 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Usp4P35123 Gm25022-201ENSMUST00000102205 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Gm22785-201ENSMUST00000104087 132 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Gm24915-201ENSMUST00000157288 78 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Gm22729-201ENSMUST00000158088 129 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Gm23038-201ENSMUST00000083873 104 ntBASIC1.53□□□□□ -2.16
Usp4P35123 Gm23261-201ENSMUST00000158316 136 ntBASIC1.52□□□□□ -2.17
Usp4P35123 Gm28767-201ENSMUST00000188601 114 ntBASIC1.52□□□□□ -2.17
Usp4P35123 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.52□□□□□ -2.17
Usp4P35123 Mir653-201ENSMUST00000102402 85 ntBASIC1.51□□□□□ -2.17
Usp4P35123 Gm24728-201ENSMUST00000158226 125 ntBASIC1.51□□□□□ -2.17
Usp4P35123 Gm25958-201ENSMUST00000175114 71 ntBASIC1.51□□□□□ -2.17
Usp4P35123 Mir6237-201ENSMUST00000183808 91 ntBASIC1.51□□□□□ -2.17
Usp4P35123 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.51□□□□□ -2.17
Usp4P35123 Gm43911-201ENSMUST00000203097 76 ntBASIC1.51□□□□□ -2.17
Usp4P35123 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.51□□□□□ -2.17
Usp4P35123 Gm22251-201ENSMUST00000083216 107 ntBASIC1.51□□□□□ -2.17
Usp4P35123 Mir320-201ENSMUST00000083594 82 ntBASIC1.51□□□□□ -2.17
Usp4P35123 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.5□□□□□ -2.17
Usp4P35123 Gm23817-201ENSMUST00000158449 104 ntBASIC1.5□□□□□ -2.17
Usp4P35123 Gm25635-201ENSMUST00000082675 131 ntBASIC1.5□□□□□ -2.17
Usp4P35123 Gm24588-201ENSMUST00000116696 83 ntBASIC1.49□□□□□ -2.17
Usp4P35123 Gm23114-201ENSMUST00000158478 117 ntBASIC1.49□□□□□ -2.17
Usp4P35123 Gm44483-201ENSMUST00000197203 97 ntBASIC1.49□□□□□ -2.17
Usp4P35123 Snord96a-201ENSMUST00000082791 81 ntBASIC1.49□□□□□ -2.17
Usp4P35123 Gm25337-201ENSMUST00000083723 104 ntBASIC1.49□□□□□ -2.17
Usp4P35123 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.48□□□□□ -2.17
Usp4P35123 Gm22672-201ENSMUST00000104414 134 ntBASIC1.48□□□□□ -2.17
Usp4P35123 Mir7665-201ENSMUST00000184907 63 ntBASIC1.48□□□□□ -2.17
Usp4P35123 Gm44602-201ENSMUST00000205948 132 ntBASIC1.48□□□□□ -2.17
Usp4P35123 Gm26082-201ENSMUST00000104070 127 ntBASIC1.47□□□□□ -2.17
Usp4P35123 Gm23881-201ENSMUST00000116872 66 ntBASIC1.47□□□□□ -2.17
Usp4P35123 Gm23558-201ENSMUST00000157823 80 ntBASIC1.47□□□□□ -2.17
Usp4P35123 Gm22801-201ENSMUST00000175624 84 ntBASIC1.47□□□□□ -2.17
Usp4P35123 Gm26466-201ENSMUST00000179615 79 ntBASIC1.47□□□□□ -2.17
Usp4P35123 Mir6962-201ENSMUST00000199512 63 ntBASIC1.47□□□□□ -2.17
Usp4P35123 Gm22354-201ENSMUST00000083919 70 ntBASIC1.47□□□□□ -2.17
Usp4P35123 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Usp4P35123 Gm25110-201ENSMUST00000116684 121 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Gm25775-201ENSMUST00000116716 121 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Gm24795-201ENSMUST00000116737 121 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Gm25171-201ENSMUST00000116926 121 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Gm25901-201ENSMUST00000158494 130 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Mir1961-201ENSMUST00000158643 112 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Traj60-201ENSMUST00000167781 54 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Gm22862-201ENSMUST00000178593 121 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Mir6240-201ENSMUST00000184281 117 ntBASIC1.46□□□□□ -2.18
Usp4P35123 Gm23130-201ENSMUST00000104252 74 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Gm24379-201ENSMUST00000122695 86 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Gm23122-201ENSMUST00000157645 103 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Usp4P35123 Gm27419-201ENSMUST00000184576 109 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Gm45197-201ENSMUST00000205288 151 ntBASIC1.45□□□□□ -2.18
Usp4P35123 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Snord60-201ENSMUST00000082834 78 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Gm23344-201ENSMUST00000083818 68 ntBASIC1.45□□□□□ -2.18
Usp4P35123 Gm23482-201ENSMUST00000104172 122 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm22544-201ENSMUST00000104349 127 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm22149-201ENSMUST00000104442 136 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm11694-201ENSMUST00000118637 159 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm14884-201ENSMUST00000120456 196 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm24399-201ENSMUST00000157869 74 ntBASIC1.44□□□□□ -2.18
Usp4P35123 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.44□□□□□ -2.18
Usp4P35123 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.44□□□□□ -2.18
Usp4P35123 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm26224-201ENSMUST00000082506 80 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm22454-201ENSMUST00000082583 107 ntBASIC1.44□□□□□ -2.18
Usp4P35123 Gm12469-201ENSMUST00000117623 207 ntBASIC1.43□□□□□ -2.18
Usp4P35123 Gm24401-201ENSMUST00000157868 91 ntBASIC1.43□□□□□ -2.18
Usp4P35123 Gm25449-201ENSMUST00000179389 79 ntBASIC1.43□□□□□ -2.18
Usp4P35123 Gm25618-201ENSMUST00000179484 107 ntBASIC1.43□□□□□ -2.18
Usp4P35123 Gm27894-201ENSMUST00000184177 92 ntBASIC1.43□□□□□ -2.18
Usp4P35123 Mir6390-201ENSMUST00000184405 129 ntBASIC1.43□□□□□ -2.18
Usp4P35123 Gm22753-201ENSMUST00000083657 107 ntBASIC1.43□□□□□ -2.18
Usp4P35123 Gm23336-201ENSMUST00000117023 123 ntBASIC1.42□□□□□ -2.18
Usp4P35123 Gm26425-201ENSMUST00000122529 82 ntBASIC1.42□□□□□ -2.18
Usp4P35123 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.42□□□□□ -2.18
Usp4P35123 Gm24476-201ENSMUST00000157437 131 ntBASIC1.42□□□□□ -2.18
Usp4P35123 Gm23349-201ENSMUST00000158432 98 ntBASIC1.42□□□□□ -2.18
Usp4P35123 Gm23917-201ENSMUST00000175256 98 ntBASIC1.42□□□□□ -2.18
Usp4P35123 Gm44488-201ENSMUST00000199467 119 ntBASIC1.42□□□□□ -2.18
Usp4P35123 Gm25759-201ENSMUST00000103988 129 ntBASIC1.41□□□□□ -2.18
Usp4P35123 Snord50a-201ENSMUST00000178154 72 ntBASIC1.41□□□□□ -2.18
Usp4P35123 Gm24463-201ENSMUST00000178417 72 ntBASIC1.41□□□□□ -2.18
Usp4P35123 Gm43206-201ENSMUST00000197990 114 ntBASIC1.41□□□□□ -2.18
Usp4P35123 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.41□□□□□ -2.18
Usp4P35123 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 148.4 ms