Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23814-201ENSMUST00000083230 102 ntBASIC2.02□□□□□ -2.09
RaraP11416 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
RaraP11416 Gm25992-201ENSMUST00000102437 109 ntBASIC2.01□□□□□ -2.09
RaraP11416 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RaraP11416 Gm24783-201ENSMUST00000157639 100 ntBASIC2.01□□□□□ -2.09
RaraP11416 Mir7241-201ENSMUST00000184532 64 ntBASIC2.01□□□□□ -2.09
RaraP11416 Gm22458-201ENSMUST00000082576 107 ntBASIC2.01□□□□□ -2.09
RaraP11416 Mir222-201ENSMUST00000083537 79 ntBASIC2.01□□□□□ -2.09
RaraP11416 Mir544-201ENSMUST00000103813 78 ntBASIC2□□□□□ -2.09
RaraP11416 Gm22673-201ENSMUST00000104415 131 ntBASIC2□□□□□ -2.09
RaraP11416 Gm11694-201ENSMUST00000118637 159 ntBASIC2□□□□□ -2.09
RaraP11416 Gm23106-201ENSMUST00000157554 101 ntBASIC2□□□□□ -2.09
RaraP11416 Gm24401-201ENSMUST00000157868 91 ntBASIC2□□□□□ -2.09
RaraP11416 Gm28862-201ENSMUST00000188246 163 ntBASIC2□□□□□ -2.09
RaraP11416 Gm26922-201ENSMUST00000082687 72 ntBASIC2□□□□□ -2.09
RaraP11416 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RaraP11416 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.99□□□□□ -2.09
RaraP11416 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.99□□□□□ -2.09
RaraP11416 Gm26133-201ENSMUST00000157363 100 ntBASIC1.99□□□□□ -2.09
RaraP11416 Snora26-201ENSMUST00000175614 121 ntBASIC1.99□□□□□ -2.09
RaraP11416 Gm25644-201ENSMUST00000083209 107 ntBASIC1.99□□□□□ -2.09
RaraP11416 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RaraP11416 Gm24384-201ENSMUST00000122693 75 ntBASIC1.98□□□□□ -2.09
RaraP11416 Gm22067-201ENSMUST00000122790 107 ntBASIC1.98□□□□□ -2.09
RaraP11416 Gm24728-201ENSMUST00000158226 125 ntBASIC1.98□□□□□ -2.09
RaraP11416 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.98□□□□□ -2.09
RaraP11416 Gm44602-201ENSMUST00000205948 132 ntBASIC1.98□□□□□ -2.09
RaraP11416 Snord14a-201ENSMUST00000082807 87 ntBASIC1.98□□□□□ -2.09
RaraP11416 Snord60-201ENSMUST00000082834 78 ntBASIC1.98□□□□□ -2.09
RaraP11416 Mir5117-201ENSMUST00000083226 84 ntBASIC1.98□□□□□ -2.09
RaraP11416 Gm23482-201ENSMUST00000104172 122 ntBASIC1.97□□□□□ -2.09
RaraP11416 Gm15692-201ENSMUST00000152173 352 ntBASIC1.97□□□□□ -2.09
RaraP11416 Gm22556-201ENSMUST00000157803 100 ntBASIC1.97□□□□□ -2.09
RaraP11416 Gm22732-201ENSMUST00000158093 121 ntBASIC1.97□□□□□ -2.09
RaraP11416 Gm5900-201ENSMUST00000179862 375 ntBASIC1.97□□□□□ -2.09
RaraP11416 Gm23056-201ENSMUST00000082803 111 ntBASIC1.97□□□□□ -2.09
RaraP11416 Mir448-201ENSMUST00000083516 112 ntBASIC1.97□□□□□ -2.09
RaraP11416 Gm24229-201ENSMUST00000158830 118 ntBASIC1.96□□□□□ -2.1
RaraP11416 Gm25836-201ENSMUST00000158918 123 ntBASIC1.96□□□□□ -2.1
RaraP11416 Gm23419-201ENSMUST00000175523 84 ntBASIC1.96□□□□□ -2.1
RaraP11416 Gm27987-201ENSMUST00000184023 93 ntBASIC1.96□□□□□ -2.1
RaraP11416 Gm37579-201ENSMUST00000194291 142 ntBASIC1.96□□□□□ -2.1
RaraP11416 Gm23170-201ENSMUST00000157158 106 ntBASIC1.95□□□□□ -2.1
RaraP11416 Mir7675-201ENSMUST00000184262 58 ntBASIC1.95□□□□□ -2.1
RaraP11416 Gm45654-201ENSMUST00000210980 123 ntBASIC1.95□□□□□ -2.1
RaraP11416 Gm23293-201ENSMUST00000082552 104 ntBASIC1.95□□□□□ -2.1
RaraP11416 Snord1a-201ENSMUST00000083160 74 ntBASIC1.95□□□□□ -2.1
RaraP11416 Gm25650-201ENSMUST00000083784 162 ntBASIC1.95□□□□□ -2.1
RaraP11416 Gm25629-201ENSMUST00000084001 107 ntBASIC1.95□□□□□ -2.1
RaraP11416 Gm23881-201ENSMUST00000116872 66 ntBASIC1.94□□□□□ -2.1
RaraP11416 Gm25542-201ENSMUST00000116889 94 ntBASIC1.94□□□□□ -2.1
RaraP11416 Gm22929-201ENSMUST00000175517 107 ntBASIC1.94□□□□□ -2.1
RaraP11416 Gm25740-201ENSMUST00000180247 107 ntBASIC1.94□□□□□ -2.1
RaraP11416 Gm37778-201ENSMUST00000191732 190 ntBASIC1.94□□□□□ -2.1
RaraP11416 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.94□□□□□ -2.1
RaraP11416 Gm24162-201ENSMUST00000093665 102 ntBASIC1.94□□□□□ -2.1
RaraP11416 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RaraP11416 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
RaraP11416 Gm12469-201ENSMUST00000117623 207 ntBASIC1.93□□□□□ -2.1
RaraP11416 Gm26478-201ENSMUST00000122611 133 ntBASIC1.93□□□□□ -2.1
RaraP11416 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.93□□□□□ -2.1
RaraP11416 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RaraP11416 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.93□□□□□ -2.1
RaraP11416 Gm22809-201ENSMUST00000082743 156 ntBASIC1.93□□□□□ -2.1
RaraP11416 Gm22544-201ENSMUST00000104349 127 ntBASIC1.92□□□□□ -2.1
RaraP11416 Gm6444-201ENSMUST00000119611 458 ntBASIC1.92□□□□□ -2.1
RaraP11416 Gm24686-201ENSMUST00000157755 93 ntBASIC1.92□□□□□ -2.1
RaraP11416 Gm22522-201ENSMUST00000158271 151 ntBASIC1.92□□□□□ -2.1
RaraP11416 Gm25035-201ENSMUST00000175414 77 ntBASIC1.92□□□□□ -2.1
RaraP11416 Gm25854-201ENSMUST00000082792 72 ntBASIC1.92□□□□□ -2.1
RaraP11416 Gm25322-201ENSMUST00000122556 104 ntBASIC1.91□□□□□ -2.1
RaraP11416 Gm24076-201ENSMUST00000158179 94 ntBASIC1.91□□□□□ -2.1
RaraP11416 Gm25901-201ENSMUST00000158494 130 ntBASIC1.91□□□□□ -2.1
RaraP11416 Gm25958-201ENSMUST00000175114 71 ntBASIC1.91□□□□□ -2.1
RaraP11416 Gm22723-201ENSMUST00000083820 129 ntBASIC1.91□□□□□ -2.1
RaraP11416 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
RaraP11416 Mir223-201ENSMUST00000102112 110 ntBASIC1.9□□□□□ -2.11
RaraP11416 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.9□□□□□ -2.11
RaraP11416 Gm44948-201ENSMUST00000209050 149 ntBASIC1.9□□□□□ -2.11
RaraP11416 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RaraP11416 Gm25170-201ENSMUST00000104191 129 ntBASIC1.89□□□□□ -2.11
RaraP11416 Gm25274-201ENSMUST00000104296 135 ntBASIC1.89□□□□□ -2.11
RaraP11416 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.89□□□□□ -2.11
RaraP11416 Mir468-201ENSMUST00000197332 78 ntBASIC1.89□□□□□ -2.11
RaraP11416 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.89□□□□□ -2.11
RaraP11416 Mir301b-201ENSMUST00000102333 97 ntBASIC1.88□□□□□ -2.11
RaraP11416 Gm24342-201ENSMUST00000103907 104 ntBASIC1.88□□□□□ -2.11
RaraP11416 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.88□□□□□ -2.11
RaraP11416 Gm24064-201ENSMUST00000157486 106 ntBASIC1.88□□□□□ -2.11
RaraP11416 Gm23967-201ENSMUST00000175062 78 ntBASIC1.88□□□□□ -2.11
RaraP11416 Mir7678-201ENSMUST00000185076 71 ntBASIC1.88□□□□□ -2.11
RaraP11416 Gm24588-201ENSMUST00000116696 83 ntBASIC1.87□□□□□ -2.11
RaraP11416 Gm24915-201ENSMUST00000157288 78 ntBASIC1.87□□□□□ -2.11
RaraP11416 Gm24638-201ENSMUST00000179807 132 ntBASIC1.87□□□□□ -2.11
RaraP11416 Mir29a-201ENSMUST00000083676 88 ntBASIC1.87□□□□□ -2.11
RaraP11416 Gm23237-201ENSMUST00000104639 92 ntBASIC1.86□□□□□ -2.11
RaraP11416 Gm23661-201ENSMUST00000122630 87 ntBASIC1.86□□□□□ -2.11
RaraP11416 Gm25663-201ENSMUST00000157698 135 ntBASIC1.86□□□□□ -2.11
RaraP11416 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RaraP11416 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 184.4 ms