Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Gm25663-201ENSMUST00000157698 135 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Gm25014-201ENSMUST00000158401 103 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Gm25836-201ENSMUST00000158918 123 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Mir468-201ENSMUST00000197332 78 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Gm25820-201ENSMUST00000198589 127 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Gm44948-201ENSMUST00000209050 149 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Gm24494-201ENSMUST00000083804 81 ntBASIC1.52□□□□□ -2.17
Pcdh1F7BJK1 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.51□□□□□ -2.17
Pcdh1F7BJK1 Gm22164-201ENSMUST00000158413 106 ntBASIC1.51□□□□□ -2.17
Pcdh1F7BJK1 Mir7225-201ENSMUST00000184178 54 ntBASIC1.51□□□□□ -2.17
Pcdh1F7BJK1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.51□□□□□ -2.17
Pcdh1F7BJK1 Gm23881-201ENSMUST00000116872 66 ntBASIC1.5□□□□□ -2.17
Pcdh1F7BJK1 Gm11694-201ENSMUST00000118637 159 ntBASIC1.5□□□□□ -2.17
Pcdh1F7BJK1 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Pcdh1F7BJK1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 Gm23900-201ENSMUST00000157569 108 ntBASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 Gm27898-201ENSMUST00000183987 80 ntBASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 Gm20108-201ENSMUST00000219977 153 ntBASIC1.49□□□□□ -2.17
Pcdh1F7BJK1 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm25279-201ENSMUST00000122608 133 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm25901-201ENSMUST00000158494 130 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm22943-201ENSMUST00000158564 76 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm24637-201ENSMUST00000158674 85 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm45197-201ENSMUST00000205288 151 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm44602-201ENSMUST00000205948 132 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm26441-201ENSMUST00000082590 104 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm26922-201ENSMUST00000082687 72 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Mir410-201ENSMUST00000083563 81 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Gm25629-201ENSMUST00000084001 107 ntBASIC1.48□□□□□ -2.17
Pcdh1F7BJK1 Mir758-201ENSMUST00000103260 81 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Gm23482-201ENSMUST00000104172 122 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Gm12469-201ENSMUST00000117623 207 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Gm26133-201ENSMUST00000157363 100 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Gm22605-201ENSMUST00000158289 108 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Mir669n-201ENSMUST00000158636 54 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Gm22140-201ENSMUST00000158745 120 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.47□□□□□ -2.17
Pcdh1F7BJK1 Gm25068-201ENSMUST00000103895 110 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm22785-201ENSMUST00000104087 132 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm22677-201ENSMUST00000116977 108 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm25045-201ENSMUST00000122670 99 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm24915-201ENSMUST00000157288 78 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm26181-201ENSMUST00000157687 106 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Mir1961-201ENSMUST00000158643 112 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm22801-201ENSMUST00000175624 84 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm25229-201ENSMUST00000178587 79 ntBASIC1.46□□□□□ -2.18
Pcdh1F7BJK1 Gm23766-201ENSMUST00000103894 80 ntBASIC1.45□□□□□ -2.18
Pcdh1F7BJK1 Gm23109-201ENSMUST00000116867 126 ntBASIC1.45□□□□□ -2.18
Pcdh1F7BJK1 Gm22069-201ENSMUST00000179911 107 ntBASIC1.45□□□□□ -2.18
Pcdh1F7BJK1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.45□□□□□ -2.18
Pcdh1F7BJK1 Gm24527-201ENSMUST00000082920 107 ntBASIC1.45□□□□□ -2.18
Pcdh1F7BJK1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.45□□□□□ -2.18
Pcdh1F7BJK1 Gm22544-201ENSMUST00000104349 127 ntBASIC1.44□□□□□ -2.18
Pcdh1F7BJK1 Gm24588-201ENSMUST00000116696 83 ntBASIC1.44□□□□□ -2.18
Pcdh1F7BJK1 Gm23468-201ENSMUST00000157125 108 ntBASIC1.44□□□□□ -2.18
Pcdh1F7BJK1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.44□□□□□ -2.18
Pcdh1F7BJK1 Mir6352-201ENSMUST00000184495 116 ntBASIC1.44□□□□□ -2.18
Pcdh1F7BJK1 Gm27639-201ENSMUST00000184937 85 ntBASIC1.44□□□□□ -2.18
Pcdh1F7BJK1 Gm25110-201ENSMUST00000116684 121 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm25775-201ENSMUST00000116716 121 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm24795-201ENSMUST00000116737 121 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm25171-201ENSMUST00000116926 121 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm24476-201ENSMUST00000157437 131 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm22551-201ENSMUST00000157795 103 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm22556-201ENSMUST00000157803 100 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm24547-201ENSMUST00000158649 149 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm22862-201ENSMUST00000178593 121 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm27686-201ENSMUST00000185123 91 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Gm28383-201ENSMUST00000187563 139 ntBASIC1.43□□□□□ -2.18
Pcdh1F7BJK1 Mir709-201ENSMUST00000102190 88 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Gm22071-201ENSMUST00000116857 83 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Gm24394-201ENSMUST00000158141 123 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Gm10548-202ENSMUST00000165672 272 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Mir7679-201ENSMUST00000183379 63 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Mir8116-201ENSMUST00000184134 97 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Mir6390-201ENSMUST00000184405 129 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Gm44469-201ENSMUST00000198558 79 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Gm44396-201ENSMUST00000199843 114 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Snord96a-201ENSMUST00000082791 81 ntBASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Pcdh1F7BJK1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.41□□□□□ -2.18
Pcdh1F7BJK1 Gm24076-201ENSMUST00000158179 94 ntBASIC1.41□□□□□ -2.18
Pcdh1F7BJK1 Gm24129-201ENSMUST00000158537 97 ntBASIC1.41□□□□□ -2.18
Pcdh1F7BJK1 Gm36956-201ENSMUST00000193830 214 ntBASIC1.41□□□□□ -2.18
Pcdh1F7BJK1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.41□□□□□ -2.18
Pcdh1F7BJK1 Mir3087-201ENSMUST00000199405 56 ntBASIC1.41□□□□□ -2.18
Pcdh1F7BJK1 Gm3702-201ENSMUST00000211754 346 ntBASIC1.41□□□□□ -2.18
Pcdh1F7BJK1 Gm23528-201ENSMUST00000104571 132 ntBASIC1.4□□□□□ -2.19
Pcdh1F7BJK1 Gm24183-201ENSMUST00000122572 93 ntBASIC1.4□□□□□ -2.19
Pcdh1F7BJK1 Gm23661-201ENSMUST00000122630 87 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 154.2 ms