Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.14□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.14□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.14□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.14□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25599-201ENSMUST00000157816 103 ntBASIC0.13□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25716-201ENSMUST00000158628 104 ntBASIC0.13□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25161-201ENSMUST00000158913 132 ntBASIC0.13□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Mir3108-201ENSMUST00000175500 79 ntBASIC0.13□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Mir1949-202ENSMUST00000199259 70 ntBASIC0.13□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm44602-201ENSMUST00000205948 132 ntBASIC0.13□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25797-201ENSMUST00000082640 107 ntBASIC0.13□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm26011-201ENSMUST00000104410 104 ntBASIC0.12□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25974-201ENSMUST00000158701 94 ntBASIC0.12□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Mir670-201ENSMUST00000102380 100 ntBASIC0.11□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25040-201ENSMUST00000103877 66 ntBASIC0.11□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm22541-201ENSMUST00000158165 127 ntBASIC0.11□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm22088-201ENSMUST00000158341 117 ntBASIC0.11□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm26225-201ENSMUST00000082508 135 ntBASIC0.11□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Snora75-201ENSMUST00000082903 133 ntBASIC0.11□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25410-201ENSMUST00000083758 137 ntBASIC0.11□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm16186-201ENSMUST00000120132 216 ntBASIC0.1□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm27943-201ENSMUST00000184844 116 ntBASIC0.1□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm18502-201ENSMUST00000218679 199 ntBASIC0.1□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25899-201ENSMUST00000082672 141 ntBASIC0.1□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm24461-201ENSMUST00000082735 103 ntBASIC0.1□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Snord47-201ENSMUST00000083034 77 ntBASIC0.1□□□□□ -2.39
Ighv1-43A0A0A6YXN5 Gm25408-201ENSMUST00000104104 133 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Snord70-201ENSMUST00000104157 87 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24278-201ENSMUST00000104239 127 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm23531-201ENSMUST00000104567 68 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm22195-201ENSMUST00000116861 108 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm23661-201ENSMUST00000122630 87 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm23761-201ENSMUST00000158347 104 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24129-201ENSMUST00000158537 97 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm42845-201ENSMUST00000197766 105 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.09□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir216b-201ENSMUST00000102363 86 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24233-201ENSMUST00000104317 122 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm11694-201ENSMUST00000118637 159 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm13065-201ENSMUST00000119178 141 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm26091-201ENSMUST00000122704 82 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm25952-201ENSMUST00000175329 74 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm28001-201ENSMUST00000183561 117 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm22303-201ENSMUST00000082686 122 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.08□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24374-201ENSMUST00000104394 106 ntBASIC0.07□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir1966-201ENSMUST00000158807 108 ntBASIC0.07□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm23337-201ENSMUST00000158959 118 ntBASIC0.07□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm37545-201ENSMUST00000186512 148 ntBASIC0.07□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir3967-201ENSMUST00000198710 68 ntBASIC0.07□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm23482-201ENSMUST00000104172 122 ntBASIC0.06□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Snord90-201ENSMUST00000104568 111 ntBASIC0.06□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm25680-201ENSMUST00000116917 126 ntBASIC0.06□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm22635-201ENSMUST00000116962 126 ntBASIC0.06□□□□□ -2.4
Ighv1-43A0A0A6YXN5 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.06□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24073-201ENSMUST00000158177 106 ntBASIC0.06□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm26202-201ENSMUST00000082910 65 ntBASIC0.06□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir669b-201ENSMUST00000102172 97 ntBASIC0.05□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir764-201ENSMUST00000103259 108 ntBASIC0.05□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir467g-201ENSMUST00000116906 120 ntBASIC0.05□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm23504-201ENSMUST00000158988 95 ntBASIC0.05□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm43749-201ENSMUST00000199345 352 ntBASIC0.05□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24524-201ENSMUST00000082925 170 ntBASIC0.05□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24445-201ENSMUST00000083981 107 ntBASIC0.05□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24246-201ENSMUST00000157315 132 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24009-201ENSMUST00000157734 93 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24750-201ENSMUST00000157843 104 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Traj61-201ENSMUST00000165025 72 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm26398-201ENSMUST00000179015 127 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir8107-201ENSMUST00000184024 117 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm38295-201ENSMUST00000191951 151 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir376b-201ENSMUST00000195930 82 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir18-201ENSMUST00000083469 96 ntBASIC0.04□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm24106-201ENSMUST00000175498 127 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mir21c-201ENSMUST00000184910 78 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm44327-201ENSMUST00000200068 117 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm22981-201ENSMUST00000082611 75 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm22973-201ENSMUST00000083298 191 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm25006-201ENSMUST00000083813 107 ntBASIC0.03□□□□□ -2.4
Ighv1-43A0A0A6YXN5 Gm25056-201ENSMUST00000157372 62 ntBASIC0.02□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm23260-201ENSMUST00000158317 172 ntBASIC0.02□□□□□ -2.41
Ighv1-43A0A0A6YXN5 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.02□□□□□ -2.41
Ighv1-43A0A0A6YXN5 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.02□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm26168-201ENSMUST00000083787 112 ntBASIC0.02□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm23708-201ENSMUST00000104367 123 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Snord72-201ENSMUST00000104549 81 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm12013-201ENSMUST00000121971 155 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm24718-201ENSMUST00000157521 136 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm23994-201ENSMUST00000158059 88 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm23020-201ENSMUST00000158766 253 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Snord95-201ENSMUST00000082846 68 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm25791-201ENSMUST00000083292 137 ntBASIC0.01□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm25091-201ENSMUST00000103997 71 ntBASIC0□□□□□ -2.41
Ighv1-43A0A0A6YXN5 Gm23180-201ENSMUST00000158686 125 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms