Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.52□□□□□ -2.33
Chrna6Q9R0W9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.52□□□□□ -2.33
Chrna6Q9R0W9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Chrna6Q9R0W9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.52□□□□□ -2.33
Chrna6Q9R0W9 Gm26225-201ENSMUST00000082508 135 ntBASIC0.52□□□□□ -2.33
Chrna6Q9R0W9 Gm23303-201ENSMUST00000082714 152 ntBASIC0.52□□□□□ -2.33
Chrna6Q9R0W9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
Chrna6Q9R0W9 Gm25329-201ENSMUST00000158041 126 ntBASIC0.51□□□□□ -2.33
Chrna6Q9R0W9 Gm26158-201ENSMUST00000158973 119 ntBASIC0.51□□□□□ -2.33
Chrna6Q9R0W9 Mir6985-201ENSMUST00000184641 61 ntBASIC0.51□□□□□ -2.33
Chrna6Q9R0W9 Gm22302-201ENSMUST00000082657 106 ntBASIC0.51□□□□□ -2.33
Chrna6Q9R0W9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 Gm13577-201ENSMUST00000121365 205 ntBASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 Gm25716-201ENSMUST00000158628 104 ntBASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 Gm23917-201ENSMUST00000175256 98 ntBASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 Gm22973-201ENSMUST00000083298 191 ntBASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.5□□□□□ -2.33
Chrna6Q9R0W9 Gm11644-201ENSMUST00000119735 150 ntBASIC0.49□□□□□ -2.33
Chrna6Q9R0W9 Gm24054-201ENSMUST00000158619 105 ntBASIC0.49□□□□□ -2.33
Chrna6Q9R0W9 Gm37545-201ENSMUST00000186512 148 ntBASIC0.49□□□□□ -2.33
Chrna6Q9R0W9 Trbv25-201ENSMUST00000194700 273 ntBASIC0.49□□□□□ -2.33
Chrna6Q9R0W9 Gm42935-201ENSMUST00000202004 151 ntBASIC0.49□□□□□ -2.33
Chrna6Q9R0W9 Gm25136-201ENSMUST00000083253 115 ntBASIC0.49□□□□□ -2.33
Chrna6Q9R0W9 Gm22373-201ENSMUST00000104584 89 ntBASIC0.48□□□□□ -2.33
Chrna6Q9R0W9 Gm24750-201ENSMUST00000157843 104 ntBASIC0.48□□□□□ -2.33
Chrna6Q9R0W9 Gm23857-201ENSMUST00000158379 111 ntBASIC0.48□□□□□ -2.33
Chrna6Q9R0W9 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.48□□□□□ -2.33
Chrna6Q9R0W9 Mir377-201ENSMUST00000083504 68 ntBASIC0.48□□□□□ -2.33
Chrna6Q9R0W9 Gm23990-201ENSMUST00000117031 117 ntBASIC0.47□□□□□ -2.33
Chrna6Q9R0W9 Gm12469-201ENSMUST00000117623 207 ntBASIC0.47□□□□□ -2.33
Chrna6Q9R0W9 Gm22699-201ENSMUST00000175376 105 ntBASIC0.47□□□□□ -2.33
Chrna6Q9R0W9 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.47□□□□□ -2.33
Chrna6Q9R0W9 Gm22169-201ENSMUST00000083229 107 ntBASIC0.47□□□□□ -2.33
Chrna6Q9R0W9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Chrna6Q9R0W9 Snord90-201ENSMUST00000104568 111 ntBASIC0.46□□□□□ -2.34
Chrna6Q9R0W9 Mir1191-201ENSMUST00000116883 120 ntBASIC0.46□□□□□ -2.34
Chrna6Q9R0W9 Gm23509-201ENSMUST00000083080 160 ntBASIC0.46□□□□□ -2.34
Chrna6Q9R0W9 Mir200a-201ENSMUST00000083466 90 ntBASIC0.46□□□□□ -2.34
Chrna6Q9R0W9 Gm25410-201ENSMUST00000083758 137 ntBASIC0.46□□□□□ -2.34
Chrna6Q9R0W9 Gm25393-201ENSMUST00000157336 285 ntBASIC0.45□□□□□ -2.34
Chrna6Q9R0W9 Mir7116-201ENSMUST00000195956 70 ntBASIC0.45□□□□□ -2.34
Chrna6Q9R0W9 Gm3702-201ENSMUST00000211754 346 ntBASIC0.45□□□□□ -2.34
Chrna6Q9R0W9 Gm23445-201ENSMUST00000082800 107 ntBASIC0.45□□□□□ -2.34
Chrna6Q9R0W9 Gm23947-201ENSMUST00000093636 107 ntBASIC0.44□□□□□ -2.34
Chrna6Q9R0W9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Gm23672-201ENSMUST00000157471 107 ntBASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Gm22541-201ENSMUST00000158165 127 ntBASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Gm22520-201ENSMUST00000158269 129 ntBASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Mir344-201ENSMUST00000083634 95 ntBASIC0.43□□□□□ -2.34
Chrna6Q9R0W9 Gm24223-201ENSMUST00000158827 90 ntBASIC0.42□□□□□ -2.34
Chrna6Q9R0W9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.42□□□□□ -2.34
Chrna6Q9R0W9 Gm25693-201ENSMUST00000175443 85 ntBASIC0.41□□□□□ -2.34
Chrna6Q9R0W9 Gm26398-201ENSMUST00000179015 127 ntBASIC0.41□□□□□ -2.34
Chrna6Q9R0W9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.41□□□□□ -2.34
Chrna6Q9R0W9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.4□□□□□ -2.35
Chrna6Q9R0W9 Gm24106-201ENSMUST00000175498 127 ntBASIC0.4□□□□□ -2.35
Chrna6Q9R0W9 Gm27943-201ENSMUST00000184844 116 ntBASIC0.4□□□□□ -2.35
Chrna6Q9R0W9 Gm25797-201ENSMUST00000082640 107 ntBASIC0.4□□□□□ -2.35
Chrna6Q9R0W9 Gm24342-201ENSMUST00000103907 104 ntBASIC0.39□□□□□ -2.35
Chrna6Q9R0W9 Gm22030-201ENSMUST00000116942 63 ntBASIC0.39□□□□□ -2.35
Chrna6Q9R0W9 Gm23253-201ENSMUST00000157441 104 ntBASIC0.39□□□□□ -2.35
Chrna6Q9R0W9 Gm24290-201ENSMUST00000157634 96 ntBASIC0.39□□□□□ -2.35
Chrna6Q9R0W9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.39□□□□□ -2.35
Chrna6Q9R0W9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.39□□□□□ -2.35
Chrna6Q9R0W9 Mir6342-201ENSMUST00000183870 125 ntBASIC0.39□□□□□ -2.35
Chrna6Q9R0W9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.38□□□□□ -2.35
Chrna6Q9R0W9 Gm24129-201ENSMUST00000158537 97 ntBASIC0.38□□□□□ -2.35
Chrna6Q9R0W9 Gm23504-201ENSMUST00000158988 95 ntBASIC0.38□□□□□ -2.35
Chrna6Q9R0W9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.38□□□□□ -2.35
Chrna6Q9R0W9 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.38□□□□□ -2.35
Chrna6Q9R0W9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm24374-201ENSMUST00000104394 106 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm26290-201ENSMUST00000158891 145 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm29535-201ENSMUST00000185723 109 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm28143-201ENSMUST00000191082 109 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Mir7229-201ENSMUST00000197062 53 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm24461-201ENSMUST00000082735 103 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.37□□□□□ -2.35
Chrna6Q9R0W9 Gm26011-201ENSMUST00000104410 104 ntBASIC0.36□□□□□ -2.35
Chrna6Q9R0W9 Mir467g-201ENSMUST00000116906 120 ntBASIC0.36□□□□□ -2.35
Chrna6Q9R0W9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.36□□□□□ -2.35
Chrna6Q9R0W9 Mir1949-202ENSMUST00000199259 70 ntBASIC0.36□□□□□ -2.35
Chrna6Q9R0W9 Gm18502-201ENSMUST00000218679 199 ntBASIC0.36□□□□□ -2.35
Chrna6Q9R0W9 Gm25416-201ENSMUST00000104221 107 ntBASIC0.35□□□□□ -2.35
Chrna6Q9R0W9 Gm25600-201ENSMUST00000158357 106 ntBASIC0.35□□□□□ -2.35
Chrna6Q9R0W9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.35□□□□□ -2.35
Chrna6Q9R0W9 Gm24321-201ENSMUST00000175348 80 ntBASIC0.35□□□□□ -2.35
Chrna6Q9R0W9 Gm44455-201ENSMUST00000200061 82 ntBASIC0.35□□□□□ -2.35
Chrna6Q9R0W9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.35□□□□□ -2.35
Chrna6Q9R0W9 Gm22149-201ENSMUST00000104442 136 ntBASIC0.34□□□□□ -2.36
Chrna6Q9R0W9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.34□□□□□ -2.36
Chrna6Q9R0W9 Gm13065-201ENSMUST00000119178 141 ntBASIC0.33□□□□□ -2.36
Chrna6Q9R0W9 Mir376b-201ENSMUST00000195930 82 ntBASIC0.33□□□□□ -2.36
Chrna6Q9R0W9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 252.4 ms