Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm26458-201ENSMUST00000082832 128 ntBASIC2.32□□□□□ -2.04
Nubp1Q9R060 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.32□□□□□ -2.04
Nubp1Q9R060 Mir544-201ENSMUST00000103813 78 ntBASIC2.31□□□□□ -2.04
Nubp1Q9R060 Gm25466-201ENSMUST00000103995 132 ntBASIC2.31□□□□□ -2.04
Nubp1Q9R060 Gm23551-201ENSMUST00000116852 121 ntBASIC2.31□□□□□ -2.04
Nubp1Q9R060 Gm24229-201ENSMUST00000158830 118 ntBASIC2.31□□□□□ -2.04
Nubp1Q9R060 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2.31□□□□□ -2.04
Nubp1Q9R060 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Nubp1Q9R060 Gm23482-201ENSMUST00000104172 122 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm26341-201ENSMUST00000104561 134 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm23106-201ENSMUST00000157554 101 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm23033-201ENSMUST00000157996 134 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm25035-201ENSMUST00000175414 77 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm28435-201ENSMUST00000185496 108 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm29047-201ENSMUST00000189816 108 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm43038-201ENSMUST00000202359 88 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Gm44602-201ENSMUST00000205948 132 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.3□□□□□ -2.04
Nubp1Q9R060 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Nubp1Q9R060 Gm15536-201ENSMUST00000121411 114 ntBASIC2.29□□□□□ -2.04
Nubp1Q9R060 Gm25820-201ENSMUST00000198589 127 ntBASIC2.29□□□□□ -2.04
Nubp1Q9R060 Snord1a-201ENSMUST00000083160 74 ntBASIC2.29□□□□□ -2.04
Nubp1Q9R060 Gm24162-201ENSMUST00000093665 102 ntBASIC2.29□□□□□ -2.04
Nubp1Q9R060 Mir223-201ENSMUST00000102112 110 ntBASIC2.28□□□□□ -2.04
Nubp1Q9R060 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Nubp1Q9R060 Gm23766-201ENSMUST00000103894 80 ntBASIC2.28□□□□□ -2.04
Nubp1Q9R060 Gm26015-201ENSMUST00000104402 125 ntBASIC2.28□□□□□ -2.04
Nubp1Q9R060 Gm23881-201ENSMUST00000116872 66 ntBASIC2.28□□□□□ -2.04
Nubp1Q9R060 Gm23761-201ENSMUST00000158347 104 ntBASIC2.28□□□□□ -2.04
Nubp1Q9R060 Mir6925-201ENSMUST00000197857 70 ntBASIC2.28□□□□□ -2.04
Nubp1Q9R060 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Nubp1Q9R060 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Nubp1Q9R060 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm24183-201ENSMUST00000122572 93 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm24686-201ENSMUST00000157755 93 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm25901-201ENSMUST00000158494 130 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm23409-201ENSMUST00000158516 237 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm24495-201ENSMUST00000178575 79 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm22253-201ENSMUST00000179870 79 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Mir6406-201ENSMUST00000183592 120 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm27786-201ENSMUST00000184337 70 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm25798-201ENSMUST00000082641 107 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Mir29a-201ENSMUST00000083676 88 ntBASIC2.27□□□□□ -2.05
Nubp1Q9R060 Gm25417-201ENSMUST00000104212 131 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 Gm24648-201ENSMUST00000157111 132 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 Gm26038-201ENSMUST00000158151 106 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 Snord93-201ENSMUST00000175580 71 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 Gm27369-201ENSMUST00000185182 71 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 Gm43512-201ENSMUST00000198495 176 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.26□□□□□ -2.05
Nubp1Q9R060 Gm25322-201ENSMUST00000122556 104 ntBASIC2.25□□□□□ -2.05
Nubp1Q9R060 Gm23048-201ENSMUST00000157237 129 ntBASIC2.25□□□□□ -2.05
Nubp1Q9R060 Gm44469-201ENSMUST00000198558 79 ntBASIC2.25□□□□□ -2.05
Nubp1Q9R060 Gm22809-201ENSMUST00000082743 156 ntBASIC2.25□□□□□ -2.05
Nubp1Q9R060 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.25□□□□□ -2.05
Nubp1Q9R060 Gm26154-201ENSMUST00000102339 96 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Mir499-201ENSMUST00000102357 79 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Gm24988-201ENSMUST00000104460 121 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Gm6444-201ENSMUST00000119611 458 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Gm22330-201ENSMUST00000158068 115 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Snord53-201ENSMUST00000175146 78 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Gm19257-201ENSMUST00000186121 183 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.24□□□□□ -2.05
Nubp1Q9R060 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
Nubp1Q9R060 Gm23203-201ENSMUST00000104374 107 ntBASIC2.23□□□□□ -2.05
Nubp1Q9R060 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nubp1Q9R060 Gm22264-201ENSMUST00000178200 107 ntBASIC2.23□□□□□ -2.05
Nubp1Q9R060 Mir423-201ENSMUST00000083584 109 ntBASIC2.23□□□□□ -2.05
Nubp1Q9R060 Gm22517-201ENSMUST00000158265 136 ntBASIC2.22□□□□□ -2.05
Nubp1Q9R060 Gm23005-201ENSMUST00000158950 136 ntBASIC2.22□□□□□ -2.05
Nubp1Q9R060 Gm44477-201ENSMUST00000199661 110 ntBASIC2.22□□□□□ -2.05
Nubp1Q9R060 Gm44948-201ENSMUST00000209050 149 ntBASIC2.22□□□□□ -2.05
Nubp1Q9R060 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Nubp1Q9R060 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Nubp1Q9R060 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Nubp1Q9R060 Mir709-201ENSMUST00000102190 88 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm25094-201ENSMUST00000103992 131 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm24670-201ENSMUST00000104154 132 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm22544-201ENSMUST00000104349 127 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm24868-201ENSMUST00000157265 136 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm23670-201ENSMUST00000157469 119 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm25663-201ENSMUST00000157698 135 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm24199-201ENSMUST00000157808 136 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm24077-201ENSMUST00000158183 136 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm24082-201ENSMUST00000175175 83 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Mir7675-201ENSMUST00000184262 58 ntBASIC2.21□□□□□ -2.06
Nubp1Q9R060 Gm11333-201ENSMUST00000119479 148 ntBASIC2.2□□□□□ -2.06
Nubp1Q9R060 Gm22803-201ENSMUST00000158049 283 ntBASIC2.2□□□□□ -2.06
Nubp1Q9R060 Gm24129-201ENSMUST00000158537 97 ntBASIC2.2□□□□□ -2.06
Nubp1Q9R060 Gm22801-201ENSMUST00000175624 84 ntBASIC2.2□□□□□ -2.06
Nubp1Q9R060 Mir8116-201ENSMUST00000184134 97 ntBASIC2.2□□□□□ -2.06
Nubp1Q9R060 Gm27399-201ENSMUST00000184250 78 ntBASIC2.2□□□□□ -2.06
Nubp1Q9R060 Gm24588-201ENSMUST00000116696 83 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Mir1197-201ENSMUST00000117037 120 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Gm23661-201ENSMUST00000122630 87 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Gm25056-201ENSMUST00000157372 62 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Gm24064-201ENSMUST00000157486 106 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms