Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Mir30a-201ENSMUST00000083471 71 ntBASIC0.84□□□□□ -2.27
Rnf4Q9QZS2 Gm23578-201ENSMUST00000103943 104 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm14626-201ENSMUST00000117619 216 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm14039-201ENSMUST00000118705 101 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm15654-201ENSMUST00000152660 300 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm24747-201ENSMUST00000157835 87 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm22286-201ENSMUST00000179708 107 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm27587-201ENSMUST00000185116 163 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm44470-201ENSMUST00000203913 142 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm24920-201ENSMUST00000083018 85 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.83□□□□□ -2.28
Rnf4Q9QZS2 Gm28767-201ENSMUST00000188601 114 ntBASIC0.82□□□□□ -2.28
Rnf4Q9QZS2 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Rnf4Q9QZS2 Gm25797-201ENSMUST00000082640 107 ntBASIC0.82□□□□□ -2.28
Rnf4Q9QZS2 Gm22544-201ENSMUST00000104349 127 ntBASIC0.81□□□□□ -2.28
Rnf4Q9QZS2 Mir7657-201ENSMUST00000196051 57 ntBASIC0.81□□□□□ -2.28
Rnf4Q9QZS2 Gm43944-201ENSMUST00000205220 120 ntBASIC0.81□□□□□ -2.28
Rnf4Q9QZS2 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.81□□□□□ -2.28
Rnf4Q9QZS2 Mir500-201ENSMUST00000093600 92 ntBASIC0.81□□□□□ -2.28
Rnf4Q9QZS2 Gm24263-201ENSMUST00000104059 107 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Gm16186-201ENSMUST00000120132 216 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Gm25544-201ENSMUST00000122676 120 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Gm23922-201ENSMUST00000178792 79 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Gm24657-201ENSMUST00000180085 79 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Gm22996-201ENSMUST00000180236 79 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Mir30f-201ENSMUST00000196073 92 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Gm44859-201ENSMUST00000207831 94 ntBASIC0.8□□□□□ -2.28
Rnf4Q9QZS2 Mir695-201ENSMUST00000102261 109 ntBASIC0.79□□□□□ -2.28
Rnf4Q9QZS2 Gm6985-201ENSMUST00000121255 271 ntBASIC0.79□□□□□ -2.28
Rnf4Q9QZS2 Gm24717-201ENSMUST00000157522 124 ntBASIC0.79□□□□□ -2.28
Rnf4Q9QZS2 Gm25633-201ENSMUST00000178565 107 ntBASIC0.79□□□□□ -2.28
Rnf4Q9QZS2 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.79□□□□□ -2.28
Rnf4Q9QZS2 Gm26011-201ENSMUST00000104410 104 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm26091-201ENSMUST00000122704 82 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm25428-201ENSMUST00000157608 114 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm23853-201ENSMUST00000158375 104 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Mir3094-201ENSMUST00000175121 64 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm23509-201ENSMUST00000083080 160 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm23678-201ENSMUST00000083157 107 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm22297-201ENSMUST00000083312 106 ntBASIC0.78□□□□□ -2.28
Rnf4Q9QZS2 Gm25497-201ENSMUST00000104425 132 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm23253-201ENSMUST00000157441 104 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm22384-201ENSMUST00000158187 104 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm25444-201ENSMUST00000158999 113 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm20386-201ENSMUST00000174010 132 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm22466-201ENSMUST00000175278 69 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm26337-201ENSMUST00000178000 79 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Mir6364-201ENSMUST00000183396 86 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Mir6369-201ENSMUST00000183772 106 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Gm45492-201ENSMUST00000211611 288 ntBASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.77□□□□□ -2.29
Rnf4Q9QZS2 Mir20b-201ENSMUST00000102087 80 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Gm26338-201ENSMUST00000102372 110 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Gm6272-201ENSMUST00000121256 171 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Gm24676-201ENSMUST00000158758 75 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Gm23504-201ENSMUST00000158988 95 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Gm38113-201ENSMUST00000193704 201 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Gm23722-201ENSMUST00000083002 130 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Mir362-201ENSMUST00000093592 65 ntBASIC0.76□□□□□ -2.29
Rnf4Q9QZS2 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Scarna9-201ENSMUST00000104318 70 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Gm24476-201ENSMUST00000157437 131 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Gm24549-201ENSMUST00000158647 139 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Gm22775-201ENSMUST00000177630 120 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Gm23569-201ENSMUST00000180120 120 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Mir6390-201ENSMUST00000184405 129 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Gm24030-201ENSMUST00000083931 164 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.75□□□□□ -2.29
Rnf4Q9QZS2 Snord69-201ENSMUST00000104024 80 ntBASIC0.74□□□□□ -2.29
Rnf4Q9QZS2 Gm24141-201ENSMUST00000122776 115 ntBASIC0.74□□□□□ -2.29
Rnf4Q9QZS2 Gm24575-201ENSMUST00000175502 77 ntBASIC0.74□□□□□ -2.29
Rnf4Q9QZS2 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.74□□□□□ -2.29
Rnf4Q9QZS2 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm23203-201ENSMUST00000104374 107 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm22966-201ENSMUST00000157957 129 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm25375-201ENSMUST00000158157 135 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm24678-201ENSMUST00000158756 104 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm26291-201ENSMUST00000158889 137 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm36956-201ENSMUST00000193830 214 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm22753-201ENSMUST00000083657 107 ntBASIC0.73□□□□□ -2.29
Rnf4Q9QZS2 Gm22786-201ENSMUST00000104086 122 ntBASIC0.72□□□□□ -2.29
Rnf4Q9QZS2 Gm23180-201ENSMUST00000158686 125 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms