Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm27993-201ENSMUST00000184362 85 ntBASIC0.51□□□□□ -2.33
Cpsf3Q9QXK7 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Mir20b-201ENSMUST00000102087 80 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm22373-201ENSMUST00000104584 89 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Mir467g-201ENSMUST00000116906 120 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm24750-201ENSMUST00000157843 104 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm23337-201ENSMUST00000158959 118 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm10548-202ENSMUST00000165672 272 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm23917-201ENSMUST00000175256 98 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Mir100-201ENSMUST00000175270 80 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm22973-201ENSMUST00000083298 191 ntBASIC0.5□□□□□ -2.33
Cpsf3Q9QXK7 Gm23672-201ENSMUST00000157471 107 ntBASIC0.49□□□□□ -2.33
Cpsf3Q9QXK7 Gm37330-201ENSMUST00000192606 153 ntBASIC0.49□□□□□ -2.33
Cpsf3Q9QXK7 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.49□□□□□ -2.33
Cpsf3Q9QXK7 Gm23947-201ENSMUST00000093636 107 ntBASIC0.49□□□□□ -2.33
Cpsf3Q9QXK7 Gm22149-201ENSMUST00000104442 136 ntBASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 Gm23321-201ENSMUST00000104465 126 ntBASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 Gm26158-201ENSMUST00000158973 119 ntBASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 Gm43432-201ENSMUST00000196352 121 ntBASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 Gm23301-201ENSMUST00000082713 65 ntBASIC0.48□□□□□ -2.33
Cpsf3Q9QXK7 Gm22469-201ENSMUST00000104118 133 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Gm23857-201ENSMUST00000158379 111 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Gm26285-201ENSMUST00000177923 107 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Mir7010-201ENSMUST00000183464 63 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Trbv25-201ENSMUST00000194700 273 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Gm42935-201ENSMUST00000202004 151 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Gm23622-201ENSMUST00000082460 107 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Gm23509-201ENSMUST00000083080 160 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Mir377-201ENSMUST00000083504 68 ntBASIC0.47□□□□□ -2.33
Cpsf3Q9QXK7 Gm25300-201ENSMUST00000175284 84 ntBASIC0.46□□□□□ -2.34
Cpsf3Q9QXK7 Gm37545-201ENSMUST00000186512 148 ntBASIC0.46□□□□□ -2.34
Cpsf3Q9QXK7 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Cpsf3Q9QXK7 Gm44469-201ENSMUST00000198558 79 ntBASIC0.46□□□□□ -2.34
Cpsf3Q9QXK7 Gm25416-201ENSMUST00000104221 107 ntBASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Mir1191-201ENSMUST00000116883 120 ntBASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Mir219b-201ENSMUST00000198317 65 ntBASIC0.45□□□□□ -2.34
Cpsf3Q9QXK7 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Cpsf3Q9QXK7 Snord90-201ENSMUST00000104568 111 ntBASIC0.44□□□□□ -2.34
Cpsf3Q9QXK7 Gm12469-201ENSMUST00000117623 207 ntBASIC0.44□□□□□ -2.34
Cpsf3Q9QXK7 Gm23253-201ENSMUST00000157441 104 ntBASIC0.44□□□□□ -2.34
Cpsf3Q9QXK7 Gm22520-201ENSMUST00000158269 129 ntBASIC0.44□□□□□ -2.34
Cpsf3Q9QXK7 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.44□□□□□ -2.34
Cpsf3Q9QXK7 Gm25797-201ENSMUST00000082640 107 ntBASIC0.44□□□□□ -2.34
Cpsf3Q9QXK7 Gm26303-201ENSMUST00000116845 119 ntBASIC0.43□□□□□ -2.34
Cpsf3Q9QXK7 Gm24106-201ENSMUST00000175498 127 ntBASIC0.43□□□□□ -2.34
Cpsf3Q9QXK7 Gm44828-201ENSMUST00000203745 106 ntBASIC0.43□□□□□ -2.34
Cpsf3Q9QXK7 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.43□□□□□ -2.34
Cpsf3Q9QXK7 Gm24374-201ENSMUST00000104394 106 ntBASIC0.42□□□□□ -2.34
Cpsf3Q9QXK7 Gm25393-201ENSMUST00000157336 285 ntBASIC0.42□□□□□ -2.34
Cpsf3Q9QXK7 Gm25060-201ENSMUST00000157374 130 ntBASIC0.42□□□□□ -2.34
Cpsf3Q9QXK7 Gm18502-201ENSMUST00000218679 199 ntBASIC0.42□□□□□ -2.34
Cpsf3Q9QXK7 Gm24461-201ENSMUST00000082735 103 ntBASIC0.42□□□□□ -2.34
Cpsf3Q9QXK7 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.41□□□□□ -2.34
Cpsf3Q9QXK7 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Cpsf3Q9QXK7 Snord72-201ENSMUST00000104549 81 ntBASIC0.4□□□□□ -2.35
Cpsf3Q9QXK7 Gm24223-201ENSMUST00000158827 90 ntBASIC0.4□□□□□ -2.35
Cpsf3Q9QXK7 Mir6342-201ENSMUST00000183870 125 ntBASIC0.4□□□□□ -2.35
Cpsf3Q9QXK7 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
Cpsf3Q9QXK7 Gm26011-201ENSMUST00000104410 104 ntBASIC0.39□□□□□ -2.35
Cpsf3Q9QXK7 Gm22706-201ENSMUST00000157907 112 ntBASIC0.39□□□□□ -2.35
Cpsf3Q9QXK7 Gm23504-201ENSMUST00000158988 95 ntBASIC0.39□□□□□ -2.35
Cpsf3Q9QXK7 Gm25693-201ENSMUST00000175443 85 ntBASIC0.39□□□□□ -2.35
Cpsf3Q9QXK7 Gm45541-201ENSMUST00000210443 54 ntBASIC0.39□□□□□ -2.35
Cpsf3Q9QXK7 Gm22030-201ENSMUST00000116942 63 ntBASIC0.38□□□□□ -2.35
Cpsf3Q9QXK7 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.38□□□□□ -2.35
Cpsf3Q9QXK7 Gm23969-201ENSMUST00000083324 74 ntBASIC0.38□□□□□ -2.35
Cpsf3Q9QXK7 Gm22541-201ENSMUST00000158165 127 ntBASIC0.37□□□□□ -2.35
Cpsf3Q9QXK7 Gm3702-201ENSMUST00000211754 346 ntBASIC0.37□□□□□ -2.35
Cpsf3Q9QXK7 Gm25894-201ENSMUST00000083458 75 ntBASIC0.37□□□□□ -2.35
Cpsf3Q9QXK7 Gm24290-201ENSMUST00000157634 96 ntBASIC0.36□□□□□ -2.35
Cpsf3Q9QXK7 Gm26290-201ENSMUST00000158891 145 ntBASIC0.36□□□□□ -2.35
Cpsf3Q9QXK7 Gm29535-201ENSMUST00000185723 109 ntBASIC0.36□□□□□ -2.35
Cpsf3Q9QXK7 Gm28143-201ENSMUST00000191082 109 ntBASIC0.36□□□□□ -2.35
Cpsf3Q9QXK7 Gm44457-201ENSMUST00000198109 76 ntBASIC0.36□□□□□ -2.35
Cpsf3Q9QXK7 Mir200a-201ENSMUST00000083466 90 ntBASIC0.36□□□□□ -2.35
Cpsf3Q9QXK7 Gm22983-201ENSMUST00000158308 104 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Gm25600-201ENSMUST00000158357 106 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Gm24129-201ENSMUST00000158537 97 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Gm22239-201ENSMUST00000175220 103 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Gm26116-201ENSMUST00000175600 77 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Mir7229-201ENSMUST00000197062 53 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Gm43749-201ENSMUST00000199345 352 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Gm44455-201ENSMUST00000200061 82 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.35□□□□□ -2.35
Cpsf3Q9QXK7 Gm25401-201ENSMUST00000082975 106 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 160.7 ms