Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.1□□□□□ -2.43
Cdc40Q9DC48 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.1□□□□□ -2.43
Cdc40Q9DC48 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.1□□□□□ -2.43
Cdc40Q9DC48 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.1□□□□□ -2.43
Cdc40Q9DC48 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.1□□□□□ -2.43
Cdc40Q9DC48 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.1□□□□□ -2.43
Cdc40Q9DC48 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.1□□□□□ -2.43
Cdc40Q9DC48 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Mir18-201ENSMUST00000083469 96 ntBASIC-0.11□□□□□ -2.43
Cdc40Q9DC48 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Snord85-201ENSMUST00000083262 73 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Mir141-201ENSMUST00000083540 72 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.12□□□□□ -2.43
Cdc40Q9DC48 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Snora75-201ENSMUST00000082903 133 ntBASIC-0.13□□□□□ -2.43
Cdc40Q9DC48 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.14□□□□□ -2.43
Cdc40Q9DC48 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.14□□□□□ -2.43
Cdc40Q9DC48 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.14□□□□□ -2.43
Cdc40Q9DC48 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.15□□□□□ -2.43
Cdc40Q9DC48 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.15□□□□□ -2.43
Cdc40Q9DC48 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.15□□□□□ -2.43
Cdc40Q9DC48 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.15□□□□□ -2.43
Cdc40Q9DC48 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Cdc40Q9DC48 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.15□□□□□ -2.43
Cdc40Q9DC48 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.15□□□□□ -2.43
Cdc40Q9DC48 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.16□□□□□ -2.44
Cdc40Q9DC48 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.16□□□□□ -2.44
Cdc40Q9DC48 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.16□□□□□ -2.44
Cdc40Q9DC48 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.16□□□□□ -2.44
Cdc40Q9DC48 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.17□□□□□ -2.44
Cdc40Q9DC48 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.18□□□□□ -2.44
Cdc40Q9DC48 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.18□□□□□ -2.44
Cdc40Q9DC48 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.18□□□□□ -2.44
Cdc40Q9DC48 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.18□□□□□ -2.44
Cdc40Q9DC48 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.18□□□□□ -2.44
Cdc40Q9DC48 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.18□□□□□ -2.44
Cdc40Q9DC48 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.18□□□□□ -2.44
Cdc40Q9DC48 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.19□□□□□ -2.44
Cdc40Q9DC48 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.19□□□□□ -2.44
Cdc40Q9DC48 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.19□□□□□ -2.44
Cdc40Q9DC48 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.19□□□□□ -2.44
Cdc40Q9DC48 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.19□□□□□ -2.44
Cdc40Q9DC48 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.19□□□□□ -2.44
Cdc40Q9DC48 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.19□□□□□ -2.44
Cdc40Q9DC48 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Mir191-201ENSMUST00000196210 74 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Cdc40Q9DC48 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.21□□□□□ -2.44
Cdc40Q9DC48 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.21□□□□□ -2.44
Cdc40Q9DC48 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.21□□□□□ -2.44
Cdc40Q9DC48 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.22□□□□□ -2.44
Cdc40Q9DC48 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.22□□□□□ -2.44
Cdc40Q9DC48 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.22□□□□□ -2.44
Cdc40Q9DC48 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.22□□□□□ -2.44
Cdc40Q9DC48 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.23□□□□□ -2.45
Cdc40Q9DC48 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.23□□□□□ -2.45
Cdc40Q9DC48 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.23□□□□□ -2.45
Cdc40Q9DC48 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.24□□□□□ -2.45
Cdc40Q9DC48 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 687 ms