Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm23881-201ENSMUST00000116872 66 ntBASIC0.35□□□□□ -2.35
Smc1aQ9CU62 Gm20409-201ENSMUST00000173457 130 ntBASIC0.35□□□□□ -2.35
Smc1aQ9CU62 Gm22348-201ENSMUST00000178674 79 ntBASIC0.35□□□□□ -2.35
Smc1aQ9CU62 Mir21b-201ENSMUST00000184317 108 ntBASIC0.35□□□□□ -2.35
Smc1aQ9CU62 Mir1298-201ENSMUST00000116681 98 ntBASIC0.34□□□□□ -2.36
Smc1aQ9CU62 Gm14626-201ENSMUST00000117619 216 ntBASIC0.34□□□□□ -2.36
Smc1aQ9CU62 Gm22706-201ENSMUST00000157907 112 ntBASIC0.34□□□□□ -2.36
Smc1aQ9CU62 Gm27694-201ENSMUST00000184740 86 ntBASIC0.34□□□□□ -2.36
Smc1aQ9CU62 Gm37330-201ENSMUST00000192606 153 ntBASIC0.34□□□□□ -2.36
Smc1aQ9CU62 Gm45541-201ENSMUST00000210443 54 ntBASIC0.34□□□□□ -2.36
Smc1aQ9CU62 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.34□□□□□ -2.36
Smc1aQ9CU62 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Smc1aQ9CU62 Gm23278-201ENSMUST00000157911 143 ntBASIC0.33□□□□□ -2.36
Smc1aQ9CU62 Gm26158-201ENSMUST00000158973 119 ntBASIC0.33□□□□□ -2.36
Smc1aQ9CU62 Gm27792-201ENSMUST00000184031 115 ntBASIC0.33□□□□□ -2.36
Smc1aQ9CU62 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Smc1aQ9CU62 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.33□□□□□ -2.36
Smc1aQ9CU62 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.33□□□□□ -2.36
Smc1aQ9CU62 Gm25497-201ENSMUST00000104425 132 ntBASIC0.32□□□□□ -2.36
Smc1aQ9CU62 Gm24590-201ENSMUST00000116699 119 ntBASIC0.32□□□□□ -2.36
Smc1aQ9CU62 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.32□□□□□ -2.36
Smc1aQ9CU62 Gm10548-202ENSMUST00000165672 272 ntBASIC0.32□□□□□ -2.36
Smc1aQ9CU62 Gm23917-201ENSMUST00000175256 98 ntBASIC0.32□□□□□ -2.36
Smc1aQ9CU62 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Gm24467-201ENSMUST00000157887 126 ntBASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Gm23857-201ENSMUST00000158379 111 ntBASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Mir3094-201ENSMUST00000175121 64 ntBASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Gm27803-201ENSMUST00000183763 119 ntBASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Gm44469-201ENSMUST00000198558 79 ntBASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Snord61-201ENSMUST00000083176 71 ntBASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Mir377-201ENSMUST00000083504 68 ntBASIC0.31□□□□□ -2.36
Smc1aQ9CU62 Mir20b-201ENSMUST00000102087 80 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm44489-201ENSMUST00000104619 97 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm25329-201ENSMUST00000158041 126 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm22520-201ENSMUST00000158269 129 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm22606-201ENSMUST00000158290 103 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm22989-201ENSMUST00000158313 86 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm26097-201ENSMUST00000179642 93 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm37746-201ENSMUST00000193249 198 ntBASIC0.3□□□□□ -2.36
Smc1aQ9CU62 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.3□□□□□ -2.36
Smc1aQ9CU62 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Gm22105-201ENSMUST00000116734 116 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Mir1191-201ENSMUST00000116883 120 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Gm12469-201ENSMUST00000117623 207 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Gm27475-201ENSMUST00000183420 61 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Mir6342-201ENSMUST00000183870 125 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Mir7065-201ENSMUST00000185110 61 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Gm44457-201ENSMUST00000198109 76 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Mir200a-201ENSMUST00000083466 90 ntBASIC0.29□□□□□ -2.36
Smc1aQ9CU62 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm17020-201ENSMUST00000172274 274 ntBASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Trbv25-201ENSMUST00000194700 273 ntBASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Mir7229-201ENSMUST00000197062 53 ntBASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm44455-201ENSMUST00000200061 82 ntBASIC0.28□□□□□ -2.36
Smc1aQ9CU62 Gm23320-201ENSMUST00000104462 127 ntBASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Gm22967-201ENSMUST00000157956 239 ntBASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Gm23209-201ENSMUST00000158667 110 ntBASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Gm22239-201ENSMUST00000175220 103 ntBASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Gm25693-201ENSMUST00000175443 85 ntBASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.27□□□□□ -2.37
Smc1aQ9CU62 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Gm23303-201ENSMUST00000082714 152 ntBASIC0.27□□□□□ -2.37
Smc1aQ9CU62 Mir466h-201ENSMUST00000104748 81 ntBASIC0.26□□□□□ -2.37
Smc1aQ9CU62 Gm23852-201ENSMUST00000158376 77 ntBASIC0.26□□□□□ -2.37
Smc1aQ9CU62 Gm42935-201ENSMUST00000202004 151 ntBASIC0.26□□□□□ -2.37
Smc1aQ9CU62 Gm24457-201ENSMUST00000083196 105 ntBASIC0.26□□□□□ -2.37
Smc1aQ9CU62 Gm25894-201ENSMUST00000083458 75 ntBASIC0.26□□□□□ -2.37
Smc1aQ9CU62 Gm25565-201ENSMUST00000104605 105 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Gm11644-201ENSMUST00000119735 150 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Gm25980-201ENSMUST00000157176 218 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Gm24290-201ENSMUST00000157634 96 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Gm26468-201ENSMUST00000158644 106 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Gm22139-201ENSMUST00000158747 105 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Gm24321-201ENSMUST00000175348 80 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Gm22621-201ENSMUST00000179678 74 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.25□□□□□ -2.37
Smc1aQ9CU62 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.24□□□□□ -2.37
Smc1aQ9CU62 Gm29535-201ENSMUST00000185723 109 ntBASIC0.24□□□□□ -2.37
Smc1aQ9CU62 Gm28143-201ENSMUST00000191082 109 ntBASIC0.24□□□□□ -2.37
Smc1aQ9CU62 Gm3702-201ENSMUST00000211754 346 ntBASIC0.24□□□□□ -2.37
Smc1aQ9CU62 Gm22048-201ENSMUST00000104721 89 ntBASIC0.23□□□□□ -2.37
Smc1aQ9CU62 Gm22030-201ENSMUST00000116942 63 ntBASIC0.23□□□□□ -2.37
Smc1aQ9CU62 Gm22541-201ENSMUST00000158165 127 ntBASIC0.23□□□□□ -2.37
Smc1aQ9CU62 Gm24223-201ENSMUST00000158827 90 ntBASIC0.23□□□□□ -2.37
Smc1aQ9CU62 Mir6365-201ENSMUST00000183990 101 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms