Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.27□□□□□ -2.45
RTRAFQ9CQE8 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.27□□□□□ -2.45
RTRAFQ9CQE8 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.27□□□□□ -2.45
RTRAFQ9CQE8 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.28□□□□□ -2.45
RTRAFQ9CQE8 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.28□□□□□ -2.45
RTRAFQ9CQE8 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.28□□□□□ -2.45
RTRAFQ9CQE8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
RTRAFQ9CQE8 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.28□□□□□ -2.45
RTRAFQ9CQE8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.28□□□□□ -2.45
RTRAFQ9CQE8 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
RTRAFQ9CQE8 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.29□□□□□ -2.46
RTRAFQ9CQE8 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.29□□□□□ -2.46
RTRAFQ9CQE8 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.29□□□□□ -2.46
RTRAFQ9CQE8 Mir488-201ENSMUST00000093595 109 ntBASIC-0.29□□□□□ -2.46
RTRAFQ9CQE8 Mir363-201ENSMUST00000093598 75 ntBASIC-0.29□□□□□ -2.46
RTRAFQ9CQE8 Gm25170-201ENSMUST00000104191 129 ntBASIC-0.3□□□□□ -2.46
RTRAFQ9CQE8 Gm22673-201ENSMUST00000104415 131 ntBASIC-0.3□□□□□ -2.46
RTRAFQ9CQE8 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.3□□□□□ -2.46
RTRAFQ9CQE8 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.3□□□□□ -2.46
RTRAFQ9CQE8 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.3□□□□□ -2.46
RTRAFQ9CQE8 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.3□□□□□ -2.46
RTRAFQ9CQE8 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.3□□□□□ -2.46
RTRAFQ9CQE8 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Gm44458-201ENSMUST00000196594 143 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.31□□□□□ -2.46
RTRAFQ9CQE8 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.32□□□□□ -2.46
RTRAFQ9CQE8 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.32□□□□□ -2.46
RTRAFQ9CQE8 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.32□□□□□ -2.46
RTRAFQ9CQE8 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.32□□□□□ -2.46
RTRAFQ9CQE8 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.32□□□□□ -2.46
RTRAFQ9CQE8 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Gm7258-201ENSMUST00000179317 300 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Gm23410-201ENSMUST00000179967 107 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Mir6394-201ENSMUST00000184738 99 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Mir327-201ENSMUST00000199328 69 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Gm23814-201ENSMUST00000083230 102 ntBASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
RTRAFQ9CQE8 Mir672-201ENSMUST00000102331 100 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Snord61-201ENSMUST00000083176 71 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Rny1-201ENSMUST00000083767 112 ntBASIC-0.34□□□□□ -2.46
RTRAFQ9CQE8 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.35□□□□□ -2.47
RTRAFQ9CQE8 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.35□□□□□ -2.47
RTRAFQ9CQE8 Gm27668-201ENSMUST00000184188 120 ntBASIC-0.35□□□□□ -2.47
RTRAFQ9CQE8 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.35□□□□□ -2.47
RTRAFQ9CQE8 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.35□□□□□ -2.47
RTRAFQ9CQE8 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Mir21b-201ENSMUST00000184317 108 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Mir6985-201ENSMUST00000184641 61 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.36□□□□□ -2.47
RTRAFQ9CQE8 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.37□□□□□ -2.47
RTRAFQ9CQE8 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.37□□□□□ -2.47
RTRAFQ9CQE8 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.37□□□□□ -2.47
RTRAFQ9CQE8 Gm22011-201ENSMUST00000158790 123 ntBASIC-0.37□□□□□ -2.47
RTRAFQ9CQE8 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.37□□□□□ -2.47
RTRAFQ9CQE8 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
RTRAFQ9CQE8 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.37□□□□□ -2.47
RTRAFQ9CQE8 Gm25274-201ENSMUST00000104296 135 ntBASIC-0.38□□□□□ -2.47
RTRAFQ9CQE8 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.38□□□□□ -2.47
RTRAFQ9CQE8 Gm22951-201ENSMUST00000179471 107 ntBASIC-0.38□□□□□ -2.47
RTRAFQ9CQE8 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.38□□□□□ -2.47
RTRAFQ9CQE8 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.38□□□□□ -2.47
RTRAFQ9CQE8 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.38□□□□□ -2.47
RTRAFQ9CQE8 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.38□□□□□ -2.47
RTRAFQ9CQE8 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Gm37889-201ENSMUST00000194174 251 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Gm23378-201ENSMUST00000082942 107 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.39□□□□□ -2.47
RTRAFQ9CQE8 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.4□□□□□ -2.47
RTRAFQ9CQE8 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.4□□□□□ -2.47
RTRAFQ9CQE8 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.4□□□□□ -2.47
RTRAFQ9CQE8 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 173 ms