Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.87□□□□□ -2.55
Rpa3Q9CQ71 Mir141-201ENSMUST00000083540 72 ntBASIC-0.87□□□□□ -2.55
Rpa3Q9CQ71 Mir489-201ENSMUST00000093599 107 ntBASIC-0.87□□□□□ -2.55
Rpa3Q9CQ71 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.88□□□□□ -2.55
Rpa3Q9CQ71 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.88□□□□□ -2.55
Rpa3Q9CQ71 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-0.88□□□□□ -2.55
Rpa3Q9CQ71 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.88□□□□□ -2.55
Rpa3Q9CQ71 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.88□□□□□ -2.55
Rpa3Q9CQ71 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.88□□□□□ -2.55
Rpa3Q9CQ71 Gm10222-201ENSMUST00000088336 294 ntBASIC-0.88□□□□□ -2.55
Rpa3Q9CQ71 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.89□□□□□ -2.55
Rpa3Q9CQ71 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.89□□□□□ -2.55
Rpa3Q9CQ71 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.89□□□□□ -2.55
Rpa3Q9CQ71 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.89□□□□□ -2.55
Rpa3Q9CQ71 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.89□□□□□ -2.55
Rpa3Q9CQ71 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.9□□□□□ -2.55
Rpa3Q9CQ71 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-0.9□□□□□ -2.55
Rpa3Q9CQ71 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.9□□□□□ -2.55
Rpa3Q9CQ71 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.9□□□□□ -2.55
Rpa3Q9CQ71 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.9□□□□□ -2.55
Rpa3Q9CQ71 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.91□□□□□ -2.56
Rpa3Q9CQ71 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.91□□□□□ -2.56
Rpa3Q9CQ71 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.92□□□□□ -2.56
Rpa3Q9CQ71 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.92□□□□□ -2.56
Rpa3Q9CQ71 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.92□□□□□ -2.56
Rpa3Q9CQ71 Snora62-201ENSMUST00000082991 149 ntBASIC-0.92□□□□□ -2.56
Rpa3Q9CQ71 Mir186-201ENSMUST00000083497 71 ntBASIC-0.92□□□□□ -2.56
Rpa3Q9CQ71 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.93□□□□□ -2.56
Rpa3Q9CQ71 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.93□□□□□ -2.56
Rpa3Q9CQ71 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.93□□□□□ -2.56
Rpa3Q9CQ71 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.93□□□□□ -2.56
Rpa3Q9CQ71 Mir146-201ENSMUST00000083667 65 ntBASIC-0.93□□□□□ -2.56
Rpa3Q9CQ71 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.93□□□□□ -2.56
Rpa3Q9CQ71 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.94□□□□□ -2.56
Rpa3Q9CQ71 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.94□□□□□ -2.56
Rpa3Q9CQ71 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.94□□□□□ -2.56
Rpa3Q9CQ71 Gm23406-201ENSMUST00000082537 122 ntBASIC-0.94□□□□□ -2.56
Rpa3Q9CQ71 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.95□□□□□ -2.56
Rpa3Q9CQ71 Gm24211-201ENSMUST00000158264 107 ntBASIC-0.95□□□□□ -2.56
Rpa3Q9CQ71 Mir384-201ENSMUST00000083565 88 ntBASIC-0.95□□□□□ -2.56
Rpa3Q9CQ71 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.96□□□□□ -2.56
Rpa3Q9CQ71 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.96□□□□□ -2.56
Rpa3Q9CQ71 AC134601.1-201ENSMUST00000221058 109 ntBASIC-0.96□□□□□ -2.56
Rpa3Q9CQ71 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.96□□□□□ -2.56
Rpa3Q9CQ71 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.96□□□□□ -2.56
Rpa3Q9CQ71 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
Rpa3Q9CQ71 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.97□□□□□ -2.56
Rpa3Q9CQ71 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.97□□□□□ -2.56
Rpa3Q9CQ71 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.98□□□□□ -2.57
Rpa3Q9CQ71 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.98□□□□□ -2.57
Rpa3Q9CQ71 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.98□□□□□ -2.57
Rpa3Q9CQ71 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.98□□□□□ -2.57
Rpa3Q9CQ71 Gm25895-201ENSMUST00000083714 100 ntBASIC-0.98□□□□□ -2.57
Rpa3Q9CQ71 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.99□□□□□ -2.57
Rpa3Q9CQ71 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.99□□□□□ -2.57
Rpa3Q9CQ71 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Rpa3Q9CQ71 Gm24508-201ENSMUST00000180104 107 ntBASIC-1□□□□□ -2.57
Rpa3Q9CQ71 Gm43381-201ENSMUST00000198553 165 ntBASIC-1□□□□□ -2.57
Rpa3Q9CQ71 Gm24455-201ENSMUST00000083348 131 ntBASIC-1□□□□□ -2.57
Rpa3Q9CQ71 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Rpa3Q9CQ71 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-1.01□□□□□ -2.57
Rpa3Q9CQ71 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC-1.01□□□□□ -2.57
Rpa3Q9CQ71 Gm27446-201ENSMUST00000183963 89 ntBASIC-1.01□□□□□ -2.57
Rpa3Q9CQ71 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.01□□□□□ -2.57
Rpa3Q9CQ71 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.01□□□□□ -2.57
Rpa3Q9CQ71 Gm25223-201ENSMUST00000158200 110 ntBASIC-1.02□□□□□ -2.57
Rpa3Q9CQ71 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
Rpa3Q9CQ71 Gm24762-201ENSMUST00000083689 104 ntBASIC-1.02□□□□□ -2.57
Rpa3Q9CQ71 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Gm26026-201ENSMUST00000122726 123 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Gm22946-201ENSMUST00000158558 82 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-1.03□□□□□ -2.57
Rpa3Q9CQ71 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.04□□□□□ -2.58
Rpa3Q9CQ71 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.04□□□□□ -2.58
Rpa3Q9CQ71 Gm11322-201ENSMUST00000118095 435 ntBASIC-1.05□□□□□ -2.58
Rpa3Q9CQ71 Gm11835-201ENSMUST00000120635 663 ntBASIC-1.05□□□□□ -2.58
Rpa3Q9CQ71 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.05□□□□□ -2.58
Rpa3Q9CQ71 Gm11694-201ENSMUST00000118637 159 ntBASIC-1.06□□□□□ -2.58
Rpa3Q9CQ71 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.06□□□□□ -2.58
Rpa3Q9CQ71 Gm26360-201ENSMUST00000158872 103 ntBASIC-1.06□□□□□ -2.58
Rpa3Q9CQ71 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.06□□□□□ -2.58
Rpa3Q9CQ71 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.06□□□□□ -2.58
Rpa3Q9CQ71 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.06□□□□□ -2.58
Rpa3Q9CQ71 Mir875-201ENSMUST00000104698 78 ntBASIC-1.07□□□□□ -2.58
Rpa3Q9CQ71 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Rpa3Q9CQ71 Gm26474-201ENSMUST00000116762 122 ntBASIC-1.07□□□□□ -2.58
Rpa3Q9CQ71 Gm26194-201ENSMUST00000175036 71 ntBASIC-1.07□□□□□ -2.58
Rpa3Q9CQ71 AC192333.1-201ENSMUST00000224573 376 ntBASIC-1.07□□□□□ -2.58
Rpa3Q9CQ71 Mir201-201ENSMUST00000083470 66 ntBASIC-1.07□□□□□ -2.58
Rpa3Q9CQ71 Gm25111-201ENSMUST00000116686 147 ntBASIC-1.08□□□□□ -2.58
Rpa3Q9CQ71 Gm11420-201ENSMUST00000120047 402 ntBASIC-1.08□□□□□ -2.58
Rpa3Q9CQ71 Gm12815-201ENSMUST00000121737 135 ntBASIC-1.08□□□□□ -2.58
Rpa3Q9CQ71 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.08□□□□□ -2.58
Rpa3Q9CQ71 Gm44387-201ENSMUST00000196298 145 ntBASIC-1.08□□□□□ -2.58
Rpa3Q9CQ71 Snord67-201ENSMUST00000104033 111 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms