Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Mir377-201ENSMUST00000083504 68 ntBASIC0.14□□□□□ -2.39
Sf3b1Q99NB9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm24238-201ENSMUST00000157792 98 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm23761-201ENSMUST00000158347 104 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm26403-201ENSMUST00000158500 105 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm27934-201ENSMUST00000158795 63 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm25693-201ENSMUST00000175443 85 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm42623-201ENSMUST00000197225 379 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm26204-201ENSMUST00000082906 107 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm24290-201ENSMUST00000157634 96 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm20409-201ENSMUST00000173457 130 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm27446-201ENSMUST00000183963 89 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm37624-201ENSMUST00000193751 219 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Gm44469-201ENSMUST00000198558 79 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.13□□□□□ -2.39
Sf3b1Q99NB9 Mir1191-201ENSMUST00000116883 120 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Gm12469-201ENSMUST00000117623 207 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Gm25329-201ENSMUST00000158041 126 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Gm25952-201ENSMUST00000175329 74 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Gm26426-201ENSMUST00000177866 123 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Gm26060-201ENSMUST00000180094 123 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Gm27792-201ENSMUST00000184031 115 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Trbv25-201ENSMUST00000194700 273 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Gm44922-201ENSMUST00000206690 90 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.12□□□□□ -2.39
Sf3b1Q99NB9 Mir20b-201ENSMUST00000102087 80 ntBASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Gm44489-201ENSMUST00000104619 97 ntBASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Mir1298-201ENSMUST00000116681 98 ntBASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Mir3094-201ENSMUST00000175121 64 ntBASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Gm24321-201ENSMUST00000175348 80 ntBASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Gm22348-201ENSMUST00000178674 79 ntBASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Mir21b-201ENSMUST00000184317 108 ntBASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.11□□□□□ -2.39
Sf3b1Q99NB9 Gm24278-201ENSMUST00000104239 127 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Mir1898-201ENSMUST00000122643 83 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Gm17020-201ENSMUST00000172274 274 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Gm22259-201ENSMUST00000178926 107 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Gm27465-201ENSMUST00000184290 91 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Gm29535-201ENSMUST00000185723 109 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Gm18665-201ENSMUST00000189783 270 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Gm28143-201ENSMUST00000191082 109 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Snord80-202ENSMUST00000199023 77 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Mir1949-202ENSMUST00000199259 70 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.1□□□□□ -2.39
Sf3b1Q99NB9 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.09□□□□□ -2.4
Sf3b1Q99NB9 Gm25315-201ENSMUST00000116823 121 ntBASIC0.09□□□□□ -2.4
Sf3b1Q99NB9 Gm22030-201ENSMUST00000116942 63 ntBASIC0.09□□□□□ -2.4
Sf3b1Q99NB9 Gm23821-201ENSMUST00000158738 106 ntBASIC0.09□□□□□ -2.4
Sf3b1Q99NB9 Mir3105-201ENSMUST00000175480 85 ntBASIC0.09□□□□□ -2.4
Sf3b1Q99NB9 Gm43381-201ENSMUST00000198553 165 ntBASIC0.09□□□□□ -2.4
Sf3b1Q99NB9 Mir670-201ENSMUST00000102380 100 ntBASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm24232-201ENSMUST00000104314 132 ntBASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm24223-201ENSMUST00000158827 90 ntBASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm42935-201ENSMUST00000202004 151 ntBASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm23303-201ENSMUST00000082714 152 ntBASIC0.08□□□□□ -2.4
Sf3b1Q99NB9 Gm23320-201ENSMUST00000104462 127 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm22541-201ENSMUST00000158165 127 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm25600-201ENSMUST00000158357 106 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm26290-201ENSMUST00000158891 145 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm26092-201ENSMUST00000179798 97 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Mir669a-1-201ENSMUST00000180238 97 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm28001-201ENSMUST00000183561 117 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm27803-201ENSMUST00000183763 119 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 AC161426.1-201ENSMUST00000214137 286 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Snord95-201ENSMUST00000082846 68 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm23461-201ENSMUST00000083265 107 ntBASIC0.07□□□□□ -2.4
Sf3b1Q99NB9 Gm25408-201ENSMUST00000104104 133 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Gm22105-201ENSMUST00000116734 116 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Gm11644-201ENSMUST00000119735 150 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Gm25980-201ENSMUST00000157176 218 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Gm23209-201ENSMUST00000158667 110 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Mir376b-201ENSMUST00000195930 82 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Snord61-201ENSMUST00000083176 71 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Mir471-201ENSMUST00000093596 67 ntBASIC0.06□□□□□ -2.4
Sf3b1Q99NB9 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Gm13065-201ENSMUST00000119178 141 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Gm24467-201ENSMUST00000157887 126 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Gm22606-201ENSMUST00000158290 103 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Gm26097-201ENSMUST00000179642 93 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Gm22303-201ENSMUST00000082686 122 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 173.5 ms