Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Mir669j-201ENSMUST00000179023 121 ntBASIC0.63□□□□□ -2.31
Chmp1b1Q99LU0 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.63□□□□□ -2.31
Chmp1b1Q99LU0 Gm36956-201ENSMUST00000193830 214 ntBASIC0.63□□□□□ -2.31
Chmp1b1Q99LU0 Snord33-201ENSMUST00000083694 84 ntBASIC0.63□□□□□ -2.31
Chmp1b1Q99LU0 Gm14626-201ENSMUST00000117619 216 ntBASIC0.62□□□□□ -2.31
Chmp1b1Q99LU0 Gm16550-201ENSMUST00000162550 126 ntBASIC0.62□□□□□ -2.31
Chmp1b1Q99LU0 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Chmp1b1Q99LU0 Trbv25-201ENSMUST00000194700 273 ntBASIC0.62□□□□□ -2.31
Chmp1b1Q99LU0 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.62□□□□□ -2.31
Chmp1b1Q99LU0 Gm42935-201ENSMUST00000202004 151 ntBASIC0.62□□□□□ -2.31
Chmp1b1Q99LU0 Gm23722-201ENSMUST00000083002 130 ntBASIC0.62□□□□□ -2.31
Chmp1b1Q99LU0 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm24579-201ENSMUST00000103964 144 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm23991-201ENSMUST00000117033 93 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm22966-201ENSMUST00000157957 129 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm23853-201ENSMUST00000158375 104 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm22775-201ENSMUST00000177630 120 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm23569-201ENSMUST00000180120 120 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm27289-201ENSMUST00000183341 82 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Mir6985-201ENSMUST00000184641 61 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Snord60-201ENSMUST00000082834 78 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Mir344-201ENSMUST00000083634 95 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.61□□□□□ -2.31
Chmp1b1Q99LU0 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.6□□□□□ -2.31
Chmp1b1Q99LU0 Gm24001-201ENSMUST00000158463 85 ntBASIC0.6□□□□□ -2.31
Chmp1b1Q99LU0 Gm24549-201ENSMUST00000158647 139 ntBASIC0.6□□□□□ -2.31
Chmp1b1Q99LU0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.6□□□□□ -2.31
Chmp1b1Q99LU0 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.6□□□□□ -2.31
Chmp1b1Q99LU0 Mir30a-201ENSMUST00000083471 71 ntBASIC0.6□□□□□ -2.31
Chmp1b1Q99LU0 Mir1191-201ENSMUST00000116883 120 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm11248-201ENSMUST00000119568 201 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm26084-201ENSMUST00000157903 104 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm23857-201ENSMUST00000158379 111 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm26290-201ENSMUST00000158891 145 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm25166-201ENSMUST00000158909 111 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm23917-201ENSMUST00000175256 98 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm24323-201ENSMUST00000175342 77 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm23416-201ENSMUST00000175520 95 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm26337-201ENSMUST00000178000 79 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm23922-201ENSMUST00000178792 79 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm24657-201ENSMUST00000180085 79 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm22996-201ENSMUST00000180236 79 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm44458-201ENSMUST00000196594 143 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm44859-201ENSMUST00000207831 94 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 DQ267101-201ENSMUST00000082562 73 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Gm22681-201ENSMUST00000083853 106 ntBASIC0.59□□□□□ -2.31
Chmp1b1Q99LU0 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 Gm24718-201ENSMUST00000157521 136 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 Gm10548-202ENSMUST00000165672 272 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 Gm22466-201ENSMUST00000175278 69 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 Mir10b-201ENSMUST00000083566 68 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 Gm26168-201ENSMUST00000083787 112 ntBASIC0.58□□□□□ -2.32
Chmp1b1Q99LU0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Mir20b-201ENSMUST00000102087 80 ntBASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Gm25091-201ENSMUST00000103997 71 ntBASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Gm23260-201ENSMUST00000158317 172 ntBASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Gm8034-201ENSMUST00000178853 132 ntBASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.57□□□□□ -2.32
Chmp1b1Q99LU0 Gm25680-201ENSMUST00000116917 126 ntBASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Gm22635-201ENSMUST00000116962 126 ntBASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Gm15289-201ENSMUST00000117793 244 ntBASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Gm26236-201ENSMUST00000175536 137 ntBASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Gm25899-201ENSMUST00000082672 141 ntBASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Mir362-201ENSMUST00000093592 65 ntBASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
Chmp1b1Q99LU0 Gm23989-201ENSMUST00000117030 66 ntBASIC0.55□□□□□ -2.32
Chmp1b1Q99LU0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.55□□□□□ -2.32
Chmp1b1Q99LU0 Gm22842-201ENSMUST00000157709 118 ntBASIC0.55□□□□□ -2.32
Chmp1b1Q99LU0 Gm25367-201ENSMUST00000158846 106 ntBASIC0.55□□□□□ -2.32
Chmp1b1Q99LU0 Gm43944-201ENSMUST00000205220 120 ntBASIC0.55□□□□□ -2.32
Chmp1b1Q99LU0 Gm20734-201ENSMUST00000216939 193 ntBASIC0.55□□□□□ -2.32
Chmp1b1Q99LU0 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.55□□□□□ -2.32
Chmp1b1Q99LU0 Gm24342-201ENSMUST00000103907 104 ntBASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm6985-201ENSMUST00000121255 271 ntBASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm24223-201ENSMUST00000158827 90 ntBASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm26291-201ENSMUST00000158889 137 ntBASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm26158-201ENSMUST00000158973 119 ntBASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.54□□□□□ -2.32
Chmp1b1Q99LU0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 206.4 ms