Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm22503-201ENSMUST00000158983 115 ntBASIC1.93□□□□□ -2.1
Clp1Q99LI9 Gm44948-201ENSMUST00000209050 149 ntBASIC1.93□□□□□ -2.1
Clp1Q99LI9 Mir764-201ENSMUST00000103259 108 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 Gm26080-201ENSMUST00000104069 131 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 Gm28794-201ENSMUST00000185276 136 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.92□□□□□ -2.1
Clp1Q99LI9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 Mir324-201ENSMUST00000083600 89 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.92□□□□□ -2.1
Clp1Q99LI9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Clp1Q99LI9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Clp1Q99LI9 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.91□□□□□ -2.1
Clp1Q99LI9 Mir709-201ENSMUST00000102190 88 ntBASIC1.91□□□□□ -2.1
Clp1Q99LI9 Gm24588-201ENSMUST00000116696 83 ntBASIC1.91□□□□□ -2.1
Clp1Q99LI9 Gm24223-201ENSMUST00000158827 90 ntBASIC1.91□□□□□ -2.1
Clp1Q99LI9 Gm22887-201ENSMUST00000178586 107 ntBASIC1.91□□□□□ -2.1
Clp1Q99LI9 Trbv25-201ENSMUST00000194700 273 ntBASIC1.91□□□□□ -2.1
Clp1Q99LI9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.91□□□□□ -2.1
Clp1Q99LI9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Clp1Q99LI9 Mir1191-201ENSMUST00000116883 120 ntBASIC1.9□□□□□ -2.11
Clp1Q99LI9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.9□□□□□ -2.11
Clp1Q99LI9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.9□□□□□ -2.11
Clp1Q99LI9 Mir468-201ENSMUST00000197332 78 ntBASIC1.9□□□□□ -2.11
Clp1Q99LI9 Snord80-201ENSMUST00000083801 81 ntBASIC1.9□□□□□ -2.11
Clp1Q99LI9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Clp1Q99LI9 Gm26369-201ENSMUST00000157825 100 ntBASIC1.89□□□□□ -2.11
Clp1Q99LI9 Gm22944-201ENSMUST00000158662 133 ntBASIC1.89□□□□□ -2.11
Clp1Q99LI9 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.89□□□□□ -2.11
Clp1Q99LI9 Gm24099-201ENSMUST00000083384 107 ntBASIC1.89□□□□□ -2.11
Clp1Q99LI9 Gm26253-201ENSMUST00000122493 103 ntBASIC1.88□□□□□ -2.11
Clp1Q99LI9 Mir1961-201ENSMUST00000158643 112 ntBASIC1.88□□□□□ -2.11
Clp1Q99LI9 Gm26290-201ENSMUST00000158891 145 ntBASIC1.88□□□□□ -2.11
Clp1Q99LI9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.88□□□□□ -2.11
Clp1Q99LI9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.88□□□□□ -2.11
Clp1Q99LI9 Mir3083-201ENSMUST00000175377 64 ntBASIC1.88□□□□□ -2.11
Clp1Q99LI9 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.88□□□□□ -2.11
Clp1Q99LI9 Gm23267-201ENSMUST00000178490 132 ntBASIC1.88□□□□□ -2.11
Clp1Q99LI9 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Clp1Q99LI9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.87□□□□□ -2.11
Clp1Q99LI9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.87□□□□□ -2.11
Clp1Q99LI9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.87□□□□□ -2.11
Clp1Q99LI9 Gm22706-201ENSMUST00000157907 112 ntBASIC1.87□□□□□ -2.11
Clp1Q99LI9 Gm24728-201ENSMUST00000158226 125 ntBASIC1.87□□□□□ -2.11
Clp1Q99LI9 Gm22801-201ENSMUST00000175624 84 ntBASIC1.87□□□□□ -2.11
Clp1Q99LI9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.87□□□□□ -2.11
Clp1Q99LI9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm22494-201ENSMUST00000104495 128 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm22089-201ENSMUST00000158336 102 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm23114-201ENSMUST00000158478 117 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm22429-201ENSMUST00000158553 130 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm23813-201ENSMUST00000175153 77 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm27420-201ENSMUST00000183823 79 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Gm26109-201ENSMUST00000083970 70 ntBASIC1.86□□□□□ -2.11
Clp1Q99LI9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
Clp1Q99LI9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.85□□□□□ -2.11
Clp1Q99LI9 Gm16265-201ENSMUST00000134558 108 ntBASIC1.85□□□□□ -2.11
Clp1Q99LI9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.85□□□□□ -2.11
Clp1Q99LI9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.85□□□□□ -2.11
Clp1Q99LI9 Mir30d-201ENSMUST00000083503 82 ntBASIC1.85□□□□□ -2.11
Clp1Q99LI9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.85□□□□□ -2.11
Clp1Q99LI9 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.84□□□□□ -2.11
Clp1Q99LI9 Mir1899-201ENSMUST00000122798 96 ntBASIC1.84□□□□□ -2.11
Clp1Q99LI9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.84□□□□□ -2.11
Clp1Q99LI9 Gm25370-201ENSMUST00000158159 94 ntBASIC1.84□□□□□ -2.11
Clp1Q99LI9 Gm44396-201ENSMUST00000199843 114 ntBASIC1.84□□□□□ -2.11
Clp1Q99LI9 Gm25289-201ENSMUST00000122799 119 ntBASIC1.83□□□□□ -2.12
Clp1Q99LI9 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.83□□□□□ -2.12
Clp1Q99LI9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.82□□□□□ -2.12
Clp1Q99LI9 Gm23065-201ENSMUST00000158236 130 ntBASIC1.82□□□□□ -2.12
Clp1Q99LI9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.82□□□□□ -2.12
Clp1Q99LI9 Gm26224-201ENSMUST00000082506 80 ntBASIC1.82□□□□□ -2.12
Clp1Q99LI9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm23060-201ENSMUST00000102345 109 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm25110-201ENSMUST00000116684 121 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm25775-201ENSMUST00000116716 121 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm24795-201ENSMUST00000116737 121 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm25171-201ENSMUST00000116926 121 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm22862-201ENSMUST00000178593 121 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Snord60-201ENSMUST00000082834 78 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm22251-201ENSMUST00000083216 107 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm26062-201ENSMUST00000083379 107 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm25337-201ENSMUST00000083723 104 ntBASIC1.81□□□□□ -2.12
Clp1Q99LI9 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.8□□□□□ -2.12
Clp1Q99LI9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.8□□□□□ -2.12
Clp1Q99LI9 Gm25629-201ENSMUST00000084001 107 ntBASIC1.8□□□□□ -2.12
Clp1Q99LI9 Gm22149-201ENSMUST00000104442 136 ntBASIC1.79□□□□□ -2.12
Clp1Q99LI9 Gm25901-201ENSMUST00000158494 130 ntBASIC1.79□□□□□ -2.12
Clp1Q99LI9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.79□□□□□ -2.12
Clp1Q99LI9 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Clp1Q99LI9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Gm12469-201ENSMUST00000117623 207 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Gm14884-201ENSMUST00000120456 196 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Gm22212-201ENSMUST00000158096 106 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Gm24770-201ENSMUST00000158505 92 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Traj60-201ENSMUST00000167781 54 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 190.3 ms