Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Scarna9-201ENSMUST00000104318 70 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Mir873a-201ENSMUST00000104863 77 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Gm25541-201ENSMUST00000116888 126 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Gm24401-201ENSMUST00000157868 91 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Gm23351-201ENSMUST00000158427 125 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Gm25958-201ENSMUST00000175114 71 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Gm24588-201ENSMUST00000116696 83 ntBASIC1.65□□□□□ -2.15
Pcdha1Q91Y21 Gm26358-201ENSMUST00000158215 97 ntBASIC1.65□□□□□ -2.15
Pcdha1Q91Y21 Gm27248-201ENSMUST00000184004 166 ntBASIC1.65□□□□□ -2.15
Pcdha1Q91Y21 Mir468-201ENSMUST00000197332 78 ntBASIC1.65□□□□□ -2.15
Pcdha1Q91Y21 Snord96a-201ENSMUST00000082791 81 ntBASIC1.65□□□□□ -2.15
Pcdha1Q91Y21 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Pcdha1Q91Y21 Mir802-201ENSMUST00000103258 97 ntBASIC1.64□□□□□ -2.15
Pcdha1Q91Y21 Gm28767-201ENSMUST00000188601 114 ntBASIC1.64□□□□□ -2.15
Pcdha1Q91Y21 Gm44308-201ENSMUST00000197080 99 ntBASIC1.64□□□□□ -2.15
Pcdha1Q91Y21 Gm44948-201ENSMUST00000209050 149 ntBASIC1.64□□□□□ -2.15
Pcdha1Q91Y21 Gm24406-201ENSMUST00000083026 128 ntBASIC1.64□□□□□ -2.15
Pcdha1Q91Y21 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Pcdha1Q91Y21 Mir653-201ENSMUST00000102402 85 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm24902-201ENSMUST00000158126 123 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm22089-201ENSMUST00000158336 102 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm22944-201ENSMUST00000158662 133 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm25831-201ENSMUST00000158924 163 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm26398-201ENSMUST00000179015 127 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Mir6351-201ENSMUST00000183826 99 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm28794-201ENSMUST00000185276 136 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm24524-201ENSMUST00000082925 170 ntBASIC1.63□□□□□ -2.15
Pcdha1Q91Y21 Gm22845-201ENSMUST00000157712 104 ntBASIC1.62□□□□□ -2.15
Pcdha1Q91Y21 Gm22551-201ENSMUST00000157795 103 ntBASIC1.62□□□□□ -2.15
Pcdha1Q91Y21 Gm24174-201ENSMUST00000158933 111 ntBASIC1.62□□□□□ -2.15
Pcdha1Q91Y21 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.62□□□□□ -2.15
Pcdha1Q91Y21 Gm43977-201ENSMUST00000203970 189 ntBASIC1.62□□□□□ -2.15
Pcdha1Q91Y21 Mir410-201ENSMUST00000083563 81 ntBASIC1.62□□□□□ -2.15
Pcdha1Q91Y21 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Pcdha1Q91Y21 Gm24728-201ENSMUST00000158226 125 ntBASIC1.61□□□□□ -2.15
Pcdha1Q91Y21 Trbv25-201ENSMUST00000194700 273 ntBASIC1.61□□□□□ -2.15
Pcdha1Q91Y21 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.61□□□□□ -2.15
Pcdha1Q91Y21 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Pcdha1Q91Y21 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Pcdha1Q91Y21 Gm22603-201ENSMUST00000157603 96 ntBASIC1.6□□□□□ -2.15
Pcdha1Q91Y21 Gm22963-201ENSMUST00000157960 91 ntBASIC1.6□□□□□ -2.15
Pcdha1Q91Y21 Gm25976-201ENSMUST00000158695 130 ntBASIC1.6□□□□□ -2.15
Pcdha1Q91Y21 Gm24222-201ENSMUST00000158834 93 ntBASIC1.6□□□□□ -2.15
Pcdha1Q91Y21 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.6□□□□□ -2.15
Pcdha1Q91Y21 Gm25370-201ENSMUST00000158159 94 ntBASIC1.59□□□□□ -2.15
Pcdha1Q91Y21 Mir1961-201ENSMUST00000158643 112 ntBASIC1.59□□□□□ -2.15
Pcdha1Q91Y21 Mir7241-201ENSMUST00000184532 64 ntBASIC1.59□□□□□ -2.15
Pcdha1Q91Y21 Gm23244-201ENSMUST00000083375 92 ntBASIC1.59□□□□□ -2.15
Pcdha1Q91Y21 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.59□□□□□ -2.15
Pcdha1Q91Y21 Snord80-201ENSMUST00000083801 81 ntBASIC1.59□□□□□ -2.15
Pcdha1Q91Y21 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Pcdha1Q91Y21 Gm15115-201ENSMUST00000121145 264 ntBASIC1.58□□□□□ -2.16
Pcdha1Q91Y21 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.58□□□□□ -2.16
Pcdha1Q91Y21 Mir1899-201ENSMUST00000122798 96 ntBASIC1.58□□□□□ -2.16
Pcdha1Q91Y21 Gm44396-201ENSMUST00000199843 114 ntBASIC1.58□□□□□ -2.16
Pcdha1Q91Y21 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.58□□□□□ -2.16
Pcdha1Q91Y21 Gm25393-201ENSMUST00000157336 285 ntBASIC1.57□□□□□ -2.16
Pcdha1Q91Y21 Gm23114-201ENSMUST00000158478 117 ntBASIC1.57□□□□□ -2.16
Pcdha1Q91Y21 Gm24223-201ENSMUST00000158827 90 ntBASIC1.57□□□□□ -2.16
Pcdha1Q91Y21 Gm26290-201ENSMUST00000158891 145 ntBASIC1.57□□□□□ -2.16
Pcdha1Q91Y21 Traj60-201ENSMUST00000167781 54 ntBASIC1.57□□□□□ -2.16
Pcdha1Q91Y21 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.57□□□□□ -2.16
Pcdha1Q91Y21 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.57□□□□□ -2.16
Pcdha1Q91Y21 Mir1191-201ENSMUST00000116883 120 ntBASIC1.56□□□□□ -2.16
Pcdha1Q91Y21 Gm23267-201ENSMUST00000178490 132 ntBASIC1.56□□□□□ -2.16
Pcdha1Q91Y21 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.56□□□□□ -2.16
Pcdha1Q91Y21 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.55□□□□□ -2.16
Pcdha1Q91Y21 Gm24915-201ENSMUST00000157288 78 ntBASIC1.55□□□□□ -2.16
Pcdha1Q91Y21 Gm26369-201ENSMUST00000157825 100 ntBASIC1.55□□□□□ -2.16
Pcdha1Q91Y21 Gm22801-201ENSMUST00000175624 84 ntBASIC1.55□□□□□ -2.16
Pcdha1Q91Y21 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha1Q91Y21 Mir709-201ENSMUST00000102190 88 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Mir764-201ENSMUST00000103259 108 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Gm24650-201ENSMUST00000157105 103 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Gm23065-201ENSMUST00000158236 130 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Gm22503-201ENSMUST00000158983 115 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Gm23967-201ENSMUST00000175062 78 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Gm27420-201ENSMUST00000183823 79 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Snord60-201ENSMUST00000082834 78 ntBASIC1.54□□□□□ -2.16
Pcdha1Q91Y21 Gm23558-201ENSMUST00000157823 80 ntBASIC1.53□□□□□ -2.16
Pcdha1Q91Y21 Gm23714-201ENSMUST00000179259 105 ntBASIC1.53□□□□□ -2.16
Pcdha1Q91Y21 Gm26224-201ENSMUST00000082506 80 ntBASIC1.53□□□□□ -2.16
Pcdha1Q91Y21 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.53□□□□□ -2.17
Pcdha1Q91Y21 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Gm16399-201ENSMUST00000181423 219 ntBASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Gm44962-201ENSMUST00000206460 279 ntBASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Mir324-201ENSMUST00000083600 89 ntBASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Pcdha1Q91Y21 Gm25759-201ENSMUST00000103988 129 ntBASIC1.51□□□□□ -2.17
Pcdha1Q91Y21 Gm23122-201ENSMUST00000157645 103 ntBASIC1.51□□□□□ -2.17
Pcdha1Q91Y21 Gm27326-201ENSMUST00000183504 95 ntBASIC1.51□□□□□ -2.17
Pcdha1Q91Y21 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Pcdha1Q91Y21 Gm24099-201ENSMUST00000083384 107 ntBASIC1.51□□□□□ -2.17
Pcdha1Q91Y21 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms