Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm25368-201ENSMUST00000158847 131 ntBASIC2.41□□□□□ -2.02
Usp3Q91W36 Mir7068-201ENSMUST00000183439 74 ntBASIC2.41□□□□□ -2.02
Usp3Q91W36 Gm6293-201ENSMUST00000050339 195 ntBASIC2.41□□□□□ -2.02
Usp3Q91W36 Gm26207-201ENSMUST00000082909 104 ntBASIC2.41□□□□□ -2.02
Usp3Q91W36 Gm24918-201ENSMUST00000083022 130 ntBASIC2.41□□□□□ -2.02
Usp3Q91W36 Gm12469-201ENSMUST00000117623 207 ntBASIC2.4□□□□□ -2.03
Usp3Q91W36 Gm24937-201ENSMUST00000122597 134 ntBASIC2.4□□□□□ -2.03
Usp3Q91W36 Gm24648-201ENSMUST00000157111 132 ntBASIC2.4□□□□□ -2.03
Usp3Q91W36 Gm24686-201ENSMUST00000157755 93 ntBASIC2.4□□□□□ -2.03
Usp3Q91W36 Gm20305-201ENSMUST00000193226 177 ntBASIC2.4□□□□□ -2.03
Usp3Q91W36 Mir29a-201ENSMUST00000083676 88 ntBASIC2.4□□□□□ -2.03
Usp3Q91W36 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.4□□□□□ -2.03
Usp3Q91W36 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Usp3Q91W36 Gm22517-201ENSMUST00000158265 136 ntBASIC2.39□□□□□ -2.03
Usp3Q91W36 Gm23763-201ENSMUST00000158345 60 ntBASIC2.39□□□□□ -2.03
Usp3Q91W36 Gm23005-201ENSMUST00000158950 136 ntBASIC2.39□□□□□ -2.03
Usp3Q91W36 Gm25958-201ENSMUST00000175114 71 ntBASIC2.39□□□□□ -2.03
Usp3Q91W36 Gm23963-201ENSMUST00000179603 77 ntBASIC2.39□□□□□ -2.03
Usp3Q91W36 Gm44602-201ENSMUST00000205948 132 ntBASIC2.39□□□□□ -2.03
Usp3Q91W36 Gm22154-201ENSMUST00000083844 131 ntBASIC2.39□□□□□ -2.03
Usp3Q91W36 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Usp3Q91W36 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.38□□□□□ -2.03
Usp3Q91W36 Gm23881-201ENSMUST00000116872 66 ntBASIC2.38□□□□□ -2.03
Usp3Q91W36 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.38□□□□□ -2.03
Usp3Q91W36 Gm25160-201ENSMUST00000158914 102 ntBASIC2.38□□□□□ -2.03
Usp3Q91W36 Mir509-201ENSMUST00000196089 75 ntBASIC2.38□□□□□ -2.03
Usp3Q91W36 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.38□□□□□ -2.03
Usp3Q91W36 Snord104-201ENSMUST00000083192 70 ntBASIC2.38□□□□□ -2.03
Usp3Q91W36 Gm23100-201ENSMUST00000083455 141 ntBASIC2.38□□□□□ -2.03
Usp3Q91W36 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Usp3Q91W36 Gm26342-201ENSMUST00000104557 129 ntBASIC2.37□□□□□ -2.03
Usp3Q91W36 Gm25423-201ENSMUST00000157609 107 ntBASIC2.37□□□□□ -2.03
Usp3Q91W36 Gm24129-201ENSMUST00000158537 97 ntBASIC2.37□□□□□ -2.03
Usp3Q91W36 Mir6390-201ENSMUST00000184405 129 ntBASIC2.37□□□□□ -2.03
Usp3Q91W36 Gm43722-201ENSMUST00000196054 124 ntBASIC2.37□□□□□ -2.03
Usp3Q91W36 Mir3069-201ENSMUST00000198802 65 ntBASIC2.37□□□□□ -2.03
Usp3Q91W36 Gm26202-201ENSMUST00000082910 65 ntBASIC2.37□□□□□ -2.03
Usp3Q91W36 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Usp3Q91W36 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usp3Q91W36 Gm26015-201ENSMUST00000104402 125 ntBASIC2.36□□□□□ -2.03
Usp3Q91W36 Gm24588-201ENSMUST00000116696 83 ntBASIC2.36□□□□□ -2.03
Usp3Q91W36 Gm44469-201ENSMUST00000198558 79 ntBASIC2.36□□□□□ -2.03
Usp3Q91W36 Gm24698-201ENSMUST00000083883 130 ntBASIC2.36□□□□□ -2.03
Usp3Q91W36 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Usp3Q91W36 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.35□□□□□ -2.03
Usp3Q91W36 Gm25901-201ENSMUST00000158494 130 ntBASIC2.35□□□□□ -2.03
Usp3Q91W36 Mir3103-201ENSMUST00000175474 67 ntBASIC2.35□□□□□ -2.03
Usp3Q91W36 Gm43927-201ENSMUST00000204599 117 ntBASIC2.35□□□□□ -2.03
Usp3Q91W36 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.35□□□□□ -2.03
Usp3Q91W36 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Usp3Q91W36 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Usp3Q91W36 Gm22544-201ENSMUST00000104349 127 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Gm26280-201ENSMUST00000157096 101 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Gm22929-201ENSMUST00000175517 107 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Mir5118-201ENSMUST00000175551 67 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Gm26499-201ENSMUST00000178544 79 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Gm26096-201ENSMUST00000179084 79 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Mir497-201ENSMUST00000200557 84 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Snord14a-201ENSMUST00000082807 87 ntBASIC2.34□□□□□ -2.03
Usp3Q91W36 Gm22802-201ENSMUST00000175621 89 ntBASIC2.33□□□□□ -2.04
Usp3Q91W36 Gm27399-201ENSMUST00000184250 78 ntBASIC2.33□□□□□ -2.04
Usp3Q91W36 Gm37557-201ENSMUST00000191640 139 ntBASIC2.33□□□□□ -2.04
Usp3Q91W36 Gm24406-201ENSMUST00000083026 128 ntBASIC2.33□□□□□ -2.04
Usp3Q91W36 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.32□□□□□ -2.04
Usp3Q91W36 Gm23033-201ENSMUST00000157996 134 ntBASIC2.32□□□□□ -2.04
Usp3Q91W36 Gm27297-201ENSMUST00000183395 105 ntBASIC2.32□□□□□ -2.04
Usp3Q91W36 Gm44477-201ENSMUST00000199661 110 ntBASIC2.32□□□□□ -2.04
Usp3Q91W36 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.32□□□□□ -2.04
Usp3Q91W36 Gm24661-201ENSMUST00000083205 104 ntBASIC2.32□□□□□ -2.04
Usp3Q91W36 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Usp3Q91W36 Gm25609-201ENSMUST00000104019 104 ntBASIC2.31□□□□□ -2.04
Usp3Q91W36 Gm25642-201ENSMUST00000175137 66 ntBASIC2.31□□□□□ -2.04
Usp3Q91W36 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Usp3Q91W36 Gm3788-201ENSMUST00000119949 136 ntBASIC2.3□□□□□ -2.04
Usp3Q91W36 Gm23172-201ENSMUST00000157160 124 ntBASIC2.3□□□□□ -2.04
Usp3Q91W36 Gm24009-201ENSMUST00000157734 93 ntBASIC2.3□□□□□ -2.04
Usp3Q91W36 Gm26485-201ENSMUST00000158019 64 ntBASIC2.3□□□□□ -2.04
Usp3Q91W36 Gm22947-201ENSMUST00000158559 91 ntBASIC2.3□□□□□ -2.04
Usp3Q91W36 Gm25707-201ENSMUST00000175120 96 ntBASIC2.3□□□□□ -2.04
Usp3Q91W36 Snord1a-201ENSMUST00000083160 74 ntBASIC2.3□□□□□ -2.04
Usp3Q91W36 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
Usp3Q91W36 Gm22048-201ENSMUST00000104721 89 ntBASIC2.29□□□□□ -2.04
Usp3Q91W36 Gm25658-201ENSMUST00000158472 128 ntBASIC2.29□□□□□ -2.04
Usp3Q91W36 Gm10548-202ENSMUST00000165672 272 ntBASIC2.29□□□□□ -2.04
Usp3Q91W36 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2.29□□□□□ -2.04
Usp3Q91W36 Mir378a-201ENSMUST00000198300 66 ntBASIC2.29□□□□□ -2.04
Usp3Q91W36 Gm24311-201ENSMUST00000082570 104 ntBASIC2.29□□□□□ -2.04
Usp3Q91W36 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.28□□□□□ -2.04
Usp3Q91W36 Gm11966-201ENSMUST00000119907 87 ntBASIC2.28□□□□□ -2.04
Usp3Q91W36 Gm23661-201ENSMUST00000122630 87 ntBASIC2.28□□□□□ -2.04
Usp3Q91W36 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.28□□□□□ -2.04
Usp3Q91W36 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.28□□□□□ -2.04
Usp3Q91W36 Mir223-201ENSMUST00000102112 110 ntBASIC2.27□□□□□ -2.05
Usp3Q91W36 Mir544-201ENSMUST00000103813 78 ntBASIC2.27□□□□□ -2.05
Usp3Q91W36 Gm25094-201ENSMUST00000103992 131 ntBASIC2.27□□□□□ -2.05
Usp3Q91W36 Mir344e-201ENSMUST00000104677 66 ntBASIC2.27□□□□□ -2.05
Usp3Q91W36 Gm16510-201ENSMUST00000153501 249 ntBASIC2.27□□□□□ -2.05
Usp3Q91W36 Gm22809-201ENSMUST00000082743 156 ntBASIC2.27□□□□□ -2.05
Usp3Q91W36 Mir423-201ENSMUST00000083584 109 ntBASIC2.27□□□□□ -2.05
Usp3Q91W36 Gm25650-201ENSMUST00000083784 162 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 253 ms