Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm26334-201ENSMUST00000179403 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25463-201ENSMUST00000179405 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25742-201ENSMUST00000179530 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25209-201ENSMUST00000179576 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm26392-201ENSMUST00000179661 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25230-201ENSMUST00000179740 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm26434-201ENSMUST00000179778 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25741-201ENSMUST00000179825 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24759-201ENSMUST00000179827 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24219-201ENSMUST00000179861 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm44483-201ENSMUST00000197203 97 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm23254-201ENSMUST00000097244 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm26498-201ENSMUST00000177799 79 ntBASIC1.6□□□□□ -2.15
Ushbp1Q8R370 Gm26230-201ENSMUST00000180141 79 ntBASIC1.6□□□□□ -2.15
Ushbp1Q8R370 Gm27265-201ENSMUST00000183559 77 ntBASIC1.6□□□□□ -2.15
Ushbp1Q8R370 Gm45429-201ENSMUST00000209527 172 ntBASIC1.6□□□□□ -2.15
Ushbp1Q8R370 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.6□□□□□ -2.15
Ushbp1Q8R370 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm25759-201ENSMUST00000103988 129 ntBASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm25753-201ENSMUST00000116792 121 ntBASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm16550-201ENSMUST00000162550 126 ntBASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm22914-201ENSMUST00000175195 77 ntBASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm22638-201ENSMUST00000179674 107 ntBASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm22055-201ENSMUST00000083388 107 ntBASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm25650-201ENSMUST00000083784 162 ntBASIC1.59□□□□□ -2.15
Ushbp1Q8R370 Gm24895-201ENSMUST00000122742 74 ntBASIC1.58□□□□□ -2.16
Ushbp1Q8R370 Gm22490-201ENSMUST00000157188 119 ntBASIC1.58□□□□□ -2.16
Ushbp1Q8R370 Gm23644-201ENSMUST00000157856 77 ntBASIC1.58□□□□□ -2.16
Ushbp1Q8R370 Gm16307-201ENSMUST00000161269 210 ntBASIC1.58□□□□□ -2.16
Ushbp1Q8R370 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.58□□□□□ -2.16
Ushbp1Q8R370 Gm26081-201ENSMUST00000104068 132 ntBASIC1.57□□□□□ -2.16
Ushbp1Q8R370 Gm25787-201ENSMUST00000104709 92 ntBASIC1.57□□□□□ -2.16
Ushbp1Q8R370 Gm22031-201ENSMUST00000116945 126 ntBASIC1.57□□□□□ -2.16
Ushbp1Q8R370 Gm25444-201ENSMUST00000158999 113 ntBASIC1.57□□□□□ -2.16
Ushbp1Q8R370 Snora41-201ENSMUST00000082668 132 ntBASIC1.57□□□□□ -2.16
Ushbp1Q8R370 Gm23838-201ENSMUST00000158067 162 ntBASIC1.56□□□□□ -2.16
Ushbp1Q8R370 Traj61-201ENSMUST00000165025 72 ntBASIC1.56□□□□□ -2.16
Ushbp1Q8R370 Gm22862-201ENSMUST00000178593 121 ntBASIC1.56□□□□□ -2.16
Ushbp1Q8R370 Gm28270-201ENSMUST00000188550 109 ntBASIC1.56□□□□□ -2.16
Ushbp1Q8R370 Gm28328-201ENSMUST00000188869 109 ntBASIC1.56□□□□□ -2.16
Ushbp1Q8R370 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.56□□□□□ -2.16
Ushbp1Q8R370 Gm23507-201ENSMUST00000083078 107 ntBASIC1.56□□□□□ -2.16
Ushbp1Q8R370 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ushbp1Q8R370 Gm24588-201ENSMUST00000116696 83 ntBASIC1.55□□□□□ -2.16
Ushbp1Q8R370 Gm23654-201ENSMUST00000116758 126 ntBASIC1.55□□□□□ -2.16
Ushbp1Q8R370 Gm23197-201ENSMUST00000158809 112 ntBASIC1.55□□□□□ -2.16
Ushbp1Q8R370 Gm27711-201ENSMUST00000183802 118 ntBASIC1.55□□□□□ -2.16
Ushbp1Q8R370 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.55□□□□□ -2.16
Ushbp1Q8R370 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Ushbp1Q8R370 Gm25680-201ENSMUST00000116917 126 ntBASIC1.54□□□□□ -2.16
Ushbp1Q8R370 Gm22635-201ENSMUST00000116962 126 ntBASIC1.54□□□□□ -2.16
Ushbp1Q8R370 Gm23763-201ENSMUST00000158345 60 ntBASIC1.54□□□□□ -2.16
Ushbp1Q8R370 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Gm22772-201ENSMUST00000104451 121 ntBASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Gm15654-201ENSMUST00000152660 300 ntBASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Gm24509-201ENSMUST00000157086 101 ntBASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Gm25358-201ENSMUST00000157189 101 ntBASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Gm25329-201ENSMUST00000158041 126 ntBASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Traj60-201ENSMUST00000167781 54 ntBASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.53□□□□□ -2.16
Ushbp1Q8R370 Gm24468-201ENSMUST00000104489 104 ntBASIC1.52□□□□□ -2.17
Ushbp1Q8R370 Gm25161-201ENSMUST00000158913 132 ntBASIC1.52□□□□□ -2.17
Ushbp1Q8R370 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.52□□□□□ -2.17
Ushbp1Q8R370 Gm25978-201ENSMUST00000158698 90 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm25380-201ENSMUST00000175463 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm24641-201ENSMUST00000178055 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm25484-201ENSMUST00000178217 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm26138-201ENSMUST00000179236 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm22821-201ENSMUST00000179288 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm27365-201ENSMUST00000184041 177 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm42935-201ENSMUST00000202004 151 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm23298-201ENSMUST00000083181 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm24614-201ENSMUST00000083269 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm22057-201ENSMUST00000083387 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm25516-201ENSMUST00000083857 107 ntBASIC1.51□□□□□ -2.17
Ushbp1Q8R370 Gm16399-201ENSMUST00000181423 219 ntBASIC1.5□□□□□ -2.17
Ushbp1Q8R370 Mir30f-201ENSMUST00000196073 92 ntBASIC1.5□□□□□ -2.17
Ushbp1Q8R370 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ushbp1Q8R370 Gm23245-201ENSMUST00000083370 135 ntBASIC1.5□□□□□ -2.17
Ushbp1Q8R370 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ushbp1Q8R370 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ushbp1Q8R370 Gm11248-201ENSMUST00000119568 201 ntBASIC1.49□□□□□ -2.17
Ushbp1Q8R370 Gm24575-201ENSMUST00000175502 77 ntBASIC1.49□□□□□ -2.17
Ushbp1Q8R370 Mir6369-201ENSMUST00000183772 106 ntBASIC1.49□□□□□ -2.17
Ushbp1Q8R370 Gm27420-201ENSMUST00000183823 79 ntBASIC1.49□□□□□ -2.17
Ushbp1Q8R370 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.49□□□□□ -2.17
Ushbp1Q8R370 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Gm22780-201ENSMUST00000104084 132 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Gm25495-201ENSMUST00000104431 131 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Gm24649-201ENSMUST00000157106 134 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Gm22559-201ENSMUST00000157329 134 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Gm22944-201ENSMUST00000158662 133 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Gm25678-201ENSMUST00000174984 73 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Gm26224-201ENSMUST00000082506 80 ntBASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Ushbp1Q8R370 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms