Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm23560-201ENSMUST00000177782 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25462-201ENSMUST00000177833 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm26059-201ENSMUST00000177865 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm22255-201ENSMUST00000177933 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25146-201ENSMUST00000177976 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25523-201ENSMUST00000178044 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24585-201ENSMUST00000178104 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm22627-201ENSMUST00000178127 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm22912-201ENSMUST00000178242 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24866-201ENSMUST00000178338 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm22524-201ENSMUST00000178357 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25710-201ENSMUST00000178367 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm23575-201ENSMUST00000178406 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24872-201ENSMUST00000178434 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm22449-201ENSMUST00000178924 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24702-201ENSMUST00000178965 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24206-201ENSMUST00000179011 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24528-201ENSMUST00000179164 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm22909-201ENSMUST00000179190 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm26334-201ENSMUST00000179403 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25463-201ENSMUST00000179405 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25742-201ENSMUST00000179530 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25209-201ENSMUST00000179576 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm26392-201ENSMUST00000179661 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25230-201ENSMUST00000179740 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm26434-201ENSMUST00000179778 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm25741-201ENSMUST00000179825 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24759-201ENSMUST00000179827 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24219-201ENSMUST00000179861 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm22756-201ENSMUST00000180118 107 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Mir7665-201ENSMUST00000184907 63 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm45429-201ENSMUST00000209527 172 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm26054-201ENSMUST00000083037 107 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24410-201ENSMUST00000083433 107 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm24492-201ENSMUST00000083798 107 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Mir466-201ENSMUST00000093591 73 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 Gm23254-201ENSMUST00000097244 79 ntBASIC1.35□□□□□ -2.19
Brf1Q8CFK2 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm23130-201ENSMUST00000104252 74 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm25495-201ENSMUST00000104431 131 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm22772-201ENSMUST00000104451 121 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm12086-201ENSMUST00000120863 228 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm24649-201ENSMUST00000157106 134 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm25678-201ENSMUST00000174984 73 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm23636-201ENSMUST00000175070 95 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm24575-201ENSMUST00000175502 77 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Mir6381-201ENSMUST00000183426 87 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm27326-201ENSMUST00000183504 95 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm27419-201ENSMUST00000184576 109 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Mir21c-201ENSMUST00000184910 78 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm25851-201ENSMUST00000082794 107 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm22055-201ENSMUST00000083388 107 ntBASIC1.34□□□□□ -2.19
Brf1Q8CFK2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.33□□□□□ -2.2
Brf1Q8CFK2 Gm28270-201ENSMUST00000188550 109 ntBASIC1.33□□□□□ -2.2
Brf1Q8CFK2 Gm28328-201ENSMUST00000188869 109 ntBASIC1.33□□□□□ -2.2
Brf1Q8CFK2 Gm23507-201ENSMUST00000083078 107 ntBASIC1.33□□□□□ -2.2
Brf1Q8CFK2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.33□□□□□ -2.2
Brf1Q8CFK2 Gm25684-201ENSMUST00000083941 107 ntBASIC1.33□□□□□ -2.2
Brf1Q8CFK2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
Brf1Q8CFK2 Gm26398-201ENSMUST00000179015 127 ntBASIC1.32□□□□□ -2.2
Brf1Q8CFK2 Trbv25-201ENSMUST00000194700 273 ntBASIC1.32□□□□□ -2.2
Brf1Q8CFK2 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.32□□□□□ -2.2
Brf1Q8CFK2 Gm24252-201ENSMUST00000083700 132 ntBASIC1.32□□□□□ -2.2
Brf1Q8CFK2 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Brf1Q8CFK2 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm25879-201ENSMUST00000104330 107 ntBASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm22149-201ENSMUST00000104442 136 ntBASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Mir1899-201ENSMUST00000122798 96 ntBASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm26274-201ENSMUST00000157103 321 ntBASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm23601-201ENSMUST00000157259 131 ntBASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm26363-201ENSMUST00000158866 83 ntBASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm25069-201ENSMUST00000175238 86 ntBASIC1.31□□□□□ -2.2
Brf1Q8CFK2 Gm22233-201ENSMUST00000157464 114 ntBASIC1.3□□□□□ -2.2
Brf1Q8CFK2 Gm25868-201ENSMUST00000158253 114 ntBASIC1.3□□□□□ -2.2
Brf1Q8CFK2 Mir6962-201ENSMUST00000199512 63 ntBASIC1.3□□□□□ -2.2
Brf1Q8CFK2 Gm42844-201ENSMUST00000200355 112 ntBASIC1.3□□□□□ -2.2
Brf1Q8CFK2 Snord60-201ENSMUST00000082834 78 ntBASIC1.3□□□□□ -2.2
Brf1Q8CFK2 Gm23245-201ENSMUST00000083370 135 ntBASIC1.3□□□□□ -2.2
Brf1Q8CFK2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.29□□□□□ -2.2
Brf1Q8CFK2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Brf1Q8CFK2 Snord78-201ENSMUST00000104032 66 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Gm25680-201ENSMUST00000116917 126 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Gm22635-201ENSMUST00000116962 126 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Gm24476-201ENSMUST00000157437 131 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Gm22515-201ENSMUST00000158273 305 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Gm25444-201ENSMUST00000158999 113 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Gm43324-201ENSMUST00000197482 289 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Mir22-201ENSMUST00000083595 95 ntBASIC1.28□□□□□ -2.2
Brf1Q8CFK2 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Brf1Q8CFK2 Gm22663-201ENSMUST00000158721 102 ntBASIC1.27□□□□□ -2.21
Brf1Q8CFK2 Mir1933-201ENSMUST00000158930 88 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 225.5 ms