Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm23857-201ENSMUST00000158379 111 ntBASIC0.28□□□□□ -2.36
Ccdc60Q8C4J0 Gm26403-201ENSMUST00000158500 105 ntBASIC0.28□□□□□ -2.36
Ccdc60Q8C4J0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.28□□□□□ -2.36
Ccdc60Q8C4J0 Mir224-201ENSMUST00000083608 82 ntBASIC0.28□□□□□ -2.36
Ccdc60Q8C4J0 Gm22967-201ENSMUST00000157956 239 ntBASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 Gm25329-201ENSMUST00000158041 126 ntBASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 Mir21b-201ENSMUST00000184317 108 ntBASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 Gm24208-201ENSMUST00000082783 135 ntBASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 Mir200a-201ENSMUST00000083466 90 ntBASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.27□□□□□ -2.37
Ccdc60Q8C4J0 Gm23320-201ENSMUST00000104462 127 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 Gm23531-201ENSMUST00000104567 68 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 Gm24288-201ENSMUST00000157630 144 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 Gm17020-201ENSMUST00000172274 274 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 Gm22239-201ENSMUST00000175220 103 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 Gm27980-201ENSMUST00000184094 169 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 Trbv25-201ENSMUST00000194700 273 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc60Q8C4J0 Mir670-201ENSMUST00000102380 100 ntBASIC0.25□□□□□ -2.37
Ccdc60Q8C4J0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.25□□□□□ -2.37
Ccdc60Q8C4J0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.25□□□□□ -2.37
Ccdc60Q8C4J0 Gm37624-201ENSMUST00000193751 219 ntBASIC0.25□□□□□ -2.37
Ccdc60Q8C4J0 Gm25980-201ENSMUST00000157176 218 ntBASIC0.24□□□□□ -2.37
Ccdc60Q8C4J0 Gm27803-201ENSMUST00000183763 119 ntBASIC0.24□□□□□ -2.37
Ccdc60Q8C4J0 Gm27792-201ENSMUST00000184031 115 ntBASIC0.24□□□□□ -2.37
Ccdc60Q8C4J0 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Ccdc60Q8C4J0 Gm12469-201ENSMUST00000117623 207 ntBASIC0.23□□□□□ -2.37
Ccdc60Q8C4J0 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.23□□□□□ -2.37
Ccdc60Q8C4J0 Gm22348-201ENSMUST00000178674 79 ntBASIC0.23□□□□□ -2.37
Ccdc60Q8C4J0 Mir7229-201ENSMUST00000197062 53 ntBASIC0.23□□□□□ -2.37
Ccdc60Q8C4J0 Gm44457-201ENSMUST00000198109 76 ntBASIC0.23□□□□□ -2.37
Ccdc60Q8C4J0 Gm42935-201ENSMUST00000202004 151 ntBASIC0.23□□□□□ -2.37
Ccdc60Q8C4J0 Gm22541-201ENSMUST00000158165 127 ntBASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm24129-201ENSMUST00000158537 97 ntBASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm18665-201ENSMUST00000189783 270 ntBASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm25894-201ENSMUST00000083458 75 ntBASIC0.22□□□□□ -2.37
Ccdc60Q8C4J0 Gm22030-201ENSMUST00000116942 63 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Mir3094-201ENSMUST00000175121 64 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Mir6342-201ENSMUST00000183870 125 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Gm27694-201ENSMUST00000184740 86 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Gm27607-201ENSMUST00000185162 122 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Gm44338-201ENSMUST00000198614 110 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Mir1949-202ENSMUST00000199259 70 ntBASIC0.21□□□□□ -2.38
Ccdc60Q8C4J0 Gm23708-201ENSMUST00000104367 123 ntBASIC0.2□□□□□ -2.38
Ccdc60Q8C4J0 Mir1191-201ENSMUST00000116883 120 ntBASIC0.2□□□□□ -2.38
Ccdc60Q8C4J0 Gm16186-201ENSMUST00000120132 216 ntBASIC0.2□□□□□ -2.38
Ccdc60Q8C4J0 Gm27943-201ENSMUST00000184844 116 ntBASIC0.2□□□□□ -2.38
Ccdc60Q8C4J0 Gm44455-201ENSMUST00000200061 82 ntBASIC0.2□□□□□ -2.38
Ccdc60Q8C4J0 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.2□□□□□ -2.38
Ccdc60Q8C4J0 Gm24833-201ENSMUST00000116775 120 ntBASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm22088-201ENSMUST00000158341 117 ntBASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm26468-201ENSMUST00000158644 106 ntBASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm26097-201ENSMUST00000179642 93 ntBASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm29535-201ENSMUST00000185723 109 ntBASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm28143-201ENSMUST00000191082 109 ntBASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm23303-201ENSMUST00000082714 152 ntBASIC0.19□□□□□ -2.38
Ccdc60Q8C4J0 Gm24278-201ENSMUST00000104239 127 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Gm25565-201ENSMUST00000104605 105 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Gm44489-201ENSMUST00000104619 97 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Scarna8-201ENSMUST00000158333 131 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Gm23209-201ENSMUST00000158667 110 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Gm24321-201ENSMUST00000175348 80 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Mir6365-201ENSMUST00000183990 101 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.18□□□□□ -2.38
Ccdc60Q8C4J0 Gm24290-201ENSMUST00000157634 96 ntBASIC0.17□□□□□ -2.38
Ccdc60Q8C4J0 Gm25600-201ENSMUST00000158357 106 ntBASIC0.17□□□□□ -2.38
Ccdc60Q8C4J0 Gm24131-201ENSMUST00000158539 107 ntBASIC0.17□□□□□ -2.38
Ccdc60Q8C4J0 Gm23180-201ENSMUST00000158686 125 ntBASIC0.17□□□□□ -2.38
Ccdc60Q8C4J0 Gm23337-201ENSMUST00000158959 118 ntBASIC0.17□□□□□ -2.38
Ccdc60Q8C4J0 Gm25693-201ENSMUST00000175443 85 ntBASIC0.17□□□□□ -2.38
Ccdc60Q8C4J0 Gm44353-201ENSMUST00000200618 138 ntBASIC0.17□□□□□ -2.38
Ccdc60Q8C4J0 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Mir669f-201ENSMUST00000103850 121 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Gm25040-201ENSMUST00000103877 66 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Gm25408-201ENSMUST00000104104 133 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Gm24223-201ENSMUST00000158827 90 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Mir3105-201ENSMUST00000175480 85 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Mir3108-201ENSMUST00000175500 79 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Mir6896-201ENSMUST00000198033 73 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Gm26202-201ENSMUST00000082910 65 ntBASIC0.16□□□□□ -2.38
Ccdc60Q8C4J0 Gm24590-201ENSMUST00000116699 119 ntBASIC0.15□□□□□ -2.39
Ccdc60Q8C4J0 Gm23994-201ENSMUST00000158059 88 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 193.2 ms