Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22517-201ENSMUST00000158265 136 ntBASIC2.56□□□□□ -2
Trim47Q8C0E3 Gm23005-201ENSMUST00000158950 136 ntBASIC2.56□□□□□ -2
Trim47Q8C0E3 Gm44477-201ENSMUST00000199661 110 ntBASIC2.56□□□□□ -2
Trim47Q8C0E3 Gm26154-201ENSMUST00000102339 96 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 Scarna9-201ENSMUST00000104318 70 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 Gm23048-201ENSMUST00000157237 129 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 Gm20477-201ENSMUST00000174028 280 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 Mir7226-201ENSMUST00000184953 60 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.55□□□□□ -2
Trim47Q8C0E3 Gm23033-201ENSMUST00000157996 134 ntBASIC2.54□□□□□ -2
Trim47Q8C0E3 Gm23477-201ENSMUST00000158882 128 ntBASIC2.54□□□□□ -2
Trim47Q8C0E3 Gm21885-201ENSMUST00000178891 327 ntBASIC2.54□□□□□ -2
Trim47Q8C0E3 Mir3569-201ENSMUST00000185080 58 ntBASIC2.54□□□□□ -2
Trim47Q8C0E3 Mir29a-201ENSMUST00000083676 88 ntBASIC2.54□□□□□ -2
Trim47Q8C0E3 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.54□□□□□ -2
Trim47Q8C0E3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Trim47Q8C0E3 Gm24044-201ENSMUST00000083107 156 ntBASIC2.53□□□□□ -2
Trim47Q8C0E3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim47Q8C0E3 Mir344e-201ENSMUST00000104677 66 ntBASIC2.52□□□□□ -2.01
Trim47Q8C0E3 Gm25964-201ENSMUST00000157171 97 ntBASIC2.52□□□□□ -2.01
Trim47Q8C0E3 Gm24686-201ENSMUST00000157755 93 ntBASIC2.52□□□□□ -2.01
Trim47Q8C0E3 Gm27544-201ENSMUST00000185069 155 ntBASIC2.52□□□□□ -2.01
Trim47Q8C0E3 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim47Q8C0E3 Gm24311-201ENSMUST00000082570 104 ntBASIC2.52□□□□□ -2.01
Trim47Q8C0E3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim47Q8C0E3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim47Q8C0E3 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim47Q8C0E3 Mir654-201ENSMUST00000104787 84 ntBASIC2.51□□□□□ -2.01
Trim47Q8C0E3 Gm11694-201ENSMUST00000118637 159 ntBASIC2.51□□□□□ -2.01
Trim47Q8C0E3 Gm14039-201ENSMUST00000118705 101 ntBASIC2.51□□□□□ -2.01
Trim47Q8C0E3 Gm37557-201ENSMUST00000191640 139 ntBASIC2.51□□□□□ -2.01
Trim47Q8C0E3 Gm24588-201ENSMUST00000116696 83 ntBASIC2.5□□□□□ -2.01
Trim47Q8C0E3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim47Q8C0E3 Gm7214-201ENSMUST00000222428 272 ntBASIC2.5□□□□□ -2.01
Trim47Q8C0E3 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.5□□□□□ -2.01
Trim47Q8C0E3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Trim47Q8C0E3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm23482-201ENSMUST00000104172 122 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm25496-201ENSMUST00000104430 120 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm26358-201ENSMUST00000158215 97 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm25838-201ENSMUST00000158920 120 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm24331-201ENSMUST00000175099 67 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm23801-201ENSMUST00000175561 67 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm24485-201ENSMUST00000178283 67 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Mir322-201ENSMUST00000083484 95 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Mir93-201ENSMUST00000083593 88 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Gm25629-201ENSMUST00000084001 107 ntBASIC2.49□□□□□ -2.01
Trim47Q8C0E3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trim47Q8C0E3 Gm25609-201ENSMUST00000104019 104 ntBASIC2.48□□□□□ -2.01
Trim47Q8C0E3 Gm24769-201ENSMUST00000158506 129 ntBASIC2.48□□□□□ -2.01
Trim47Q8C0E3 Mir6406-201ENSMUST00000183592 120 ntBASIC2.48□□□□□ -2.01
Trim47Q8C0E3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.48□□□□□ -2.01
Trim47Q8C0E3 Gm24661-201ENSMUST00000083205 104 ntBASIC2.48□□□□□ -2.01
Trim47Q8C0E3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trim47Q8C0E3 Gm24701-201ENSMUST00000101946 105 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Gm26280-201ENSMUST00000157096 101 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Gm23856-201ENSMUST00000158380 99 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Gm24547-201ENSMUST00000158649 149 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Gm24226-201ENSMUST00000158826 97 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Gm24221-201ENSMUST00000158833 313 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Mir6997-201ENSMUST00000184313 71 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Gm24406-201ENSMUST00000083026 128 ntBASIC2.47□□□□□ -2.01
Trim47Q8C0E3 Gm23950-201ENSMUST00000104026 129 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Gm22200-201ENSMUST00000158614 67 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Gm28256-201ENSMUST00000188953 139 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Gm28559-201ENSMUST00000190532 139 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Mir509-201ENSMUST00000196089 75 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Gm44602-201ENSMUST00000205948 132 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Mir532-201ENSMUST00000093630 96 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trim47Q8C0E3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trim47Q8C0E3 Gm22159-201ENSMUST00000158412 130 ntBASIC2.45□□□□□ -2.02
Trim47Q8C0E3 Mir7026-201ENSMUST00000184384 67 ntBASIC2.45□□□□□ -2.02
Trim47Q8C0E3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim47Q8C0E3 Gm24648-201ENSMUST00000157111 132 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm23670-201ENSMUST00000157469 119 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm22078-201ENSMUST00000157593 103 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm22551-201ENSMUST00000157795 103 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm22803-201ENSMUST00000158049 283 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm23763-201ENSMUST00000158345 60 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm22413-201ENSMUST00000175465 85 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm26712-201ENSMUST00000180813 217 ntBASIC2.44□□□□□ -2.02
Trim47Q8C0E3 Gm23766-201ENSMUST00000103894 80 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Gm25619-201ENSMUST00000122621 104 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Gm25368-201ENSMUST00000158847 131 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Gm28767-201ENSMUST00000188601 114 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Gm3724-201ENSMUST00000197957 349 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Gm25820-201ENSMUST00000198589 127 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Gm25788-201ENSMUST00000082721 131 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Mir423-201ENSMUST00000083584 109 ntBASIC2.43□□□□□ -2.02
Trim47Q8C0E3 Gm25622-201ENSMUST00000157217 104 ntBASIC2.42□□□□□ -2.02
Trim47Q8C0E3 Mir6419-201ENSMUST00000184784 113 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 679.3 ms