Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim35Q8C006 Mir693-201ENSMUST00000102187 89 ntBASIC3.2□□□□□ -1.9
Trim35Q8C006 Gm22595-201ENSMUST00000104250 130 ntBASIC3.2□□□□□ -1.9
Trim35Q8C006 Gm24366-201ENSMUST00000175383 86 ntBASIC3.2□□□□□ -1.9
Trim35Q8C006 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Trim35Q8C006 Gm23347-201ENSMUST00000083823 82 ntBASIC3.2□□□□□ -1.9
Trim35Q8C006 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim35Q8C006 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim35Q8C006 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm23175-201ENSMUST00000104371 132 ntBASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm24376-201ENSMUST00000104399 127 ntBASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm22497-201ENSMUST00000104499 131 ntBASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm15190-201ENSMUST00000120855 276 ntBASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm22722-201ENSMUST00000157467 132 ntBASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm22833-201ENSMUST00000158292 132 ntBASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm25768-201ENSMUST00000158570 98 ntBASIC3.19□□□□□ -1.9
Trim35Q8C006 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim35Q8C006 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim35Q8C006 Gm25326-201ENSMUST00000101903 107 ntBASIC3.18□□□□□ -1.9
Trim35Q8C006 Mir1198-201ENSMUST00000116995 121 ntBASIC3.18□□□□□ -1.9
Trim35Q8C006 Gm4479-201ENSMUST00000178807 171 ntBASIC3.18□□□□□ -1.9
Trim35Q8C006 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim35Q8C006 Gm25416-201ENSMUST00000104221 107 ntBASIC3.17□□□□□ -1.9
Trim35Q8C006 Gm24070-201ENSMUST00000104519 130 ntBASIC3.17□□□□□ -1.9
Trim35Q8C006 Gm22030-201ENSMUST00000116942 63 ntBASIC3.17□□□□□ -1.9
Trim35Q8C006 Mir7578-201ENSMUST00000183455 82 ntBASIC3.17□□□□□ -1.9
Trim35Q8C006 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim35Q8C006 Gm24290-201ENSMUST00000157634 96 ntBASIC3.16□□□□□ -1.9
Trim35Q8C006 Gm23208-201ENSMUST00000158666 127 ntBASIC3.16□□□□□ -1.9
Trim35Q8C006 AC163289.1-201ENSMUST00000215919 262 ntBASIC3.16□□□□□ -1.9
Trim35Q8C006 Snord57-201ENSMUST00000083338 72 ntBASIC3.16□□□□□ -1.9
Trim35Q8C006 Gm24297-201ENSMUST00000158300 68 ntBASIC3.15□□□□□ -1.91
Trim35Q8C006 Gm25693-201ENSMUST00000175443 85 ntBASIC3.15□□□□□ -1.91
Trim35Q8C006 Gm28002-201ENSMUST00000184832 100 ntBASIC3.15□□□□□ -1.91
Trim35Q8C006 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim35Q8C006 AC125488.1-201ENSMUST00000219586 212 ntBASIC3.15□□□□□ -1.91
Trim35Q8C006 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Trim35Q8C006 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim35Q8C006 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.14□□□□□ -1.91
Trim35Q8C006 Gm24890-201ENSMUST00000104389 102 ntBASIC3.14□□□□□ -1.91
Trim35Q8C006 Mir5104-201ENSMUST00000175319 94 ntBASIC3.14□□□□□ -1.91
Trim35Q8C006 Gm19257-201ENSMUST00000186121 183 ntBASIC3.14□□□□□ -1.91
Trim35Q8C006 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC3.14□□□□□ -1.91
Trim35Q8C006 AF357428-201ENSMUST00000083815 69 ntBASIC3.14□□□□□ -1.91
Trim35Q8C006 Mir3071-201ENSMUST00000093621 80 ntBASIC3.14□□□□□ -1.91
Trim35Q8C006 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
Trim35Q8C006 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trim35Q8C006 Gm26423-201ENSMUST00000104277 128 ntBASIC3.13□□□□□ -1.91
Trim35Q8C006 Mir291a-201ENSMUST00000104815 82 ntBASIC3.13□□□□□ -1.91
Trim35Q8C006 Gm37428-201ENSMUST00000193886 137 ntBASIC3.13□□□□□ -1.91
Trim35Q8C006 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.13□□□□□ -1.91
Trim35Q8C006 Gm23297-201ENSMUST00000083184 127 ntBASIC3.13□□□□□ -1.91
Trim35Q8C006 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim35Q8C006 Gm3788-201ENSMUST00000119949 136 ntBASIC3.12□□□□□ -1.91
Trim35Q8C006 Gm24915-201ENSMUST00000157288 78 ntBASIC3.12□□□□□ -1.91
Trim35Q8C006 Gm36956-201ENSMUST00000193830 214 ntBASIC3.12□□□□□ -1.91
Trim35Q8C006 AC134601.3-201ENSMUST00000221682 154 ntBASIC3.12□□□□□ -1.91
Trim35Q8C006 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim35Q8C006 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trim35Q8C006 Gm23573-201ENSMUST00000104408 107 ntBASIC3.11□□□□□ -1.91
Trim35Q8C006 Gm25996-201ENSMUST00000175393 117 ntBASIC3.11□□□□□ -1.91
Trim35Q8C006 Gm22550-201ENSMUST00000179774 107 ntBASIC3.11□□□□□ -1.91
Trim35Q8C006 Gm27993-201ENSMUST00000184362 85 ntBASIC3.11□□□□□ -1.91
Trim35Q8C006 Gm18433-202ENSMUST00000195682 196 ntBASIC3.11□□□□□ -1.91
Trim35Q8C006 Gm22060-201ENSMUST00000082558 107 ntBASIC3.11□□□□□ -1.91
Trim35Q8C006 Gm24459-201ENSMUST00000082730 86 ntBASIC3.11□□□□□ -1.91
Trim35Q8C006 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim35Q8C006 Gm22961-201ENSMUST00000157964 106 ntBASIC3.1□□□□□ -1.91
Trim35Q8C006 Gm25490-201ENSMUST00000158734 130 ntBASIC3.1□□□□□ -1.91
Trim35Q8C006 Gm22532-201ENSMUST00000158822 140 ntBASIC3.1□□□□□ -1.91
Trim35Q8C006 Gm23714-201ENSMUST00000179259 105 ntBASIC3.1□□□□□ -1.91
Trim35Q8C006 Gm23136-201ENSMUST00000083425 99 ntBASIC3.1□□□□□ -1.91
Trim35Q8C006 Gm23991-201ENSMUST00000117033 93 ntBASIC3.09□□□□□ -1.91
Trim35Q8C006 Gm22403-201ENSMUST00000174919 84 ntBASIC3.09□□□□□ -1.91
Trim35Q8C006 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim35Q8C006 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trim35Q8C006 Gm18433-201ENSMUST00000192747 197 ntBASIC3.09□□□□□ -1.91
Trim35Q8C006 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.09□□□□□ -1.91
Trim35Q8C006 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
Trim35Q8C006 Gm25308-201ENSMUST00000104171 158 ntBASIC3.08□□□□□ -1.92
Trim35Q8C006 Mir1955-201ENSMUST00000158014 98 ntBASIC3.08□□□□□ -1.92
Trim35Q8C006 Gm25958-201ENSMUST00000175114 71 ntBASIC3.08□□□□□ -1.92
Trim35Q8C006 Gm27893-201ENSMUST00000184408 194 ntBASIC3.08□□□□□ -1.92
Trim35Q8C006 n-R5s12-201ENSMUST00000083785 119 ntBASIC3.08□□□□□ -1.92
Trim35Q8C006 Gm22151-201ENSMUST00000116963 58 ntBASIC3.07□□□□□ -1.92
Trim35Q8C006 Gm24476-201ENSMUST00000157437 131 ntBASIC3.07□□□□□ -1.92
Trim35Q8C006 Gm42677-201ENSMUST00000196363 127 ntBASIC3.07□□□□□ -1.92
Trim35Q8C006 Gm22302-201ENSMUST00000082657 106 ntBASIC3.07□□□□□ -1.92
Trim35Q8C006 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim35Q8C006 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim35Q8C006 Mir3086-201ENSMUST00000175072 87 ntBASIC3.06□□□□□ -1.92
Trim35Q8C006 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.06□□□□□ -1.92
Trim35Q8C006 Gm27783-201ENSMUST00000183534 105 ntBASIC3.06□□□□□ -1.92
Trim35Q8C006 AL928567.1-201ENSMUST00000197891 138 ntBASIC3.06□□□□□ -1.92
Trim35Q8C006 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim35Q8C006 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim35Q8C006 Mir669h-201ENSMUST00000116944 125 ntBASIC3.05□□□□□ -1.92
Trim35Q8C006 n-R5s70-201ENSMUST00000122650 116 ntBASIC3.05□□□□□ -1.92
Trim35Q8C006 Gm23036-201ENSMUST00000157885 99 ntBASIC3.05□□□□□ -1.92
Trim35Q8C006 Gm25066-201ENSMUST00000158145 123 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 176.8 ms