Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm24783-201ENSMUST00000157639 100 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Gm22551-201ENSMUST00000157795 103 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Gm25370-201ENSMUST00000158159 94 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Gm22944-201ENSMUST00000158662 133 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Gm26466-201ENSMUST00000179615 79 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Mir6950-201ENSMUST00000184438 73 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Mir468-201ENSMUST00000197332 78 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Snord60-201ENSMUST00000082834 78 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Gm23377-201ENSMUST00000082943 126 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Gm24478-201ENSMUST00000157439 158 ntBASIC1.85□□□□□ -2.11
Ubp1Q811S7 Gm22212-201ENSMUST00000158096 106 ntBASIC1.85□□□□□ -2.11
Ubp1Q811S7 Gm22801-201ENSMUST00000175624 84 ntBASIC1.85□□□□□ -2.11
Ubp1Q811S7 Mir7226-201ENSMUST00000184953 60 ntBASIC1.85□□□□□ -2.11
Ubp1Q811S7 Gm25337-201ENSMUST00000083723 104 ntBASIC1.85□□□□□ -2.11
Ubp1Q811S7 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ubp1Q811S7 Mir3096-201ENSMUST00000116685 71 ntBASIC1.84□□□□□ -2.11
Ubp1Q811S7 Mir1899-201ENSMUST00000122798 96 ntBASIC1.84□□□□□ -2.11
Ubp1Q811S7 Gm25618-201ENSMUST00000179484 107 ntBASIC1.84□□□□□ -2.11
Ubp1Q811S7 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.84□□□□□ -2.11
Ubp1Q811S7 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ubp1Q811S7 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.83□□□□□ -2.12
Ubp1Q811S7 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.83□□□□□ -2.12
Ubp1Q811S7 Gm23114-201ENSMUST00000158478 117 ntBASIC1.83□□□□□ -2.12
Ubp1Q811S7 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.83□□□□□ -2.12
Ubp1Q811S7 Mir7017-201ENSMUST00000184894 62 ntBASIC1.83□□□□□ -2.12
Ubp1Q811S7 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ubp1Q811S7 Gm26253-201ENSMUST00000122493 103 ntBASIC1.82□□□□□ -2.12
Ubp1Q811S7 Gm24547-201ENSMUST00000158649 149 ntBASIC1.82□□□□□ -2.12
Ubp1Q811S7 Gm23344-201ENSMUST00000083818 68 ntBASIC1.82□□□□□ -2.12
Ubp1Q811S7 Gm23038-201ENSMUST00000083873 104 ntBASIC1.82□□□□□ -2.12
Ubp1Q811S7 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Ubp1Q811S7 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ubp1Q811S7 Gm24271-201ENSMUST00000102327 111 ntBASIC1.81□□□□□ -2.12
Ubp1Q811S7 Gm23950-201ENSMUST00000104026 129 ntBASIC1.81□□□□□ -2.12
Ubp1Q811S7 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.81□□□□□ -2.12
Ubp1Q811S7 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ubp1Q811S7 Gm23951-201ENSMUST00000104029 132 ntBASIC1.8□□□□□ -2.12
Ubp1Q811S7 Gm23109-201ENSMUST00000116867 126 ntBASIC1.8□□□□□ -2.12
Ubp1Q811S7 Gm27544-201ENSMUST00000185069 155 ntBASIC1.8□□□□□ -2.12
Ubp1Q811S7 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ubp1Q811S7 Gm14884-201ENSMUST00000120456 196 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Gm26274-201ENSMUST00000157103 321 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Mir6406-201ENSMUST00000183592 120 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Mir7678-201ENSMUST00000185076 71 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Gm37778-201ENSMUST00000191732 190 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Gm44932-201ENSMUST00000206799 121 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Gm26224-201ENSMUST00000082506 80 ntBASIC1.79□□□□□ -2.12
Ubp1Q811S7 Gm23011-201ENSMUST00000104148 132 ntBASIC1.78□□□□□ -2.12
Ubp1Q811S7 Gm23881-201ENSMUST00000116872 66 ntBASIC1.78□□□□□ -2.12
Ubp1Q811S7 Gm12469-201ENSMUST00000117623 207 ntBASIC1.78□□□□□ -2.12
Ubp1Q811S7 Gm25901-201ENSMUST00000158494 130 ntBASIC1.78□□□□□ -2.12
Ubp1Q811S7 Gm44469-201ENSMUST00000198558 79 ntBASIC1.78□□□□□ -2.12
Ubp1Q811S7 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.78□□□□□ -2.12
Ubp1Q811S7 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Ubp1Q811S7 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Ubp1Q811S7 Gm24984-201ENSMUST00000104454 133 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Gm23065-201ENSMUST00000158236 130 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Mir669n-201ENSMUST00000158636 54 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Gm24177-201ENSMUST00000158927 131 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Mir6995-201ENSMUST00000183658 71 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Gm44308-201ENSMUST00000197080 99 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Gm44396-201ENSMUST00000199843 114 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Gm45754-201ENSMUST00000212380 279 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.77□□□□□ -2.13
Ubp1Q811S7 Gm25992-201ENSMUST00000102437 109 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm25759-201ENSMUST00000103988 129 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm25110-201ENSMUST00000116684 121 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm25775-201ENSMUST00000116716 121 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm24795-201ENSMUST00000116737 121 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm25171-201ENSMUST00000116926 121 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm22862-201ENSMUST00000178593 121 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Mir7009-201ENSMUST00000184519 64 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Mir3569-201ENSMUST00000185080 58 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm43944-201ENSMUST00000205220 120 ntBASIC1.76□□□□□ -2.13
Ubp1Q811S7 Gm23670-201ENSMUST00000157469 119 ntBASIC1.75□□□□□ -2.13
Ubp1Q811S7 Gm24808-201ENSMUST00000157993 118 ntBASIC1.75□□□□□ -2.13
Ubp1Q811S7 Gm24222-201ENSMUST00000158834 93 ntBASIC1.75□□□□□ -2.13
Ubp1Q811S7 Mir5619-201ENSMUST00000176065 61 ntBASIC1.75□□□□□ -2.13
Ubp1Q811S7 Gm24801-201ENSMUST00000178503 105 ntBASIC1.75□□□□□ -2.13
Ubp1Q811S7 Mir7026-201ENSMUST00000184384 67 ntBASIC1.75□□□□□ -2.13
Ubp1Q811S7 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ubp1Q811S7 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Ubp1Q811S7 Gm26133-201ENSMUST00000157363 100 ntBASIC1.74□□□□□ -2.13
Ubp1Q811S7 Gm27993-201ENSMUST00000184362 85 ntBASIC1.74□□□□□ -2.13
Ubp1Q811S7 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Mir758-201ENSMUST00000103260 81 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Gm25279-201ENSMUST00000122608 133 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Gm23048-201ENSMUST00000157237 129 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Gm23900-201ENSMUST00000157569 108 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Traj60-201ENSMUST00000167781 54 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Gm16399-201ENSMUST00000181423 219 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Mir7679-201ENSMUST00000183379 63 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Mir6390-201ENSMUST00000184405 129 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Gm43512-201ENSMUST00000198495 176 ntBASIC1.73□□□□□ -2.13
Ubp1Q811S7 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ubp1Q811S7 Gm23130-201ENSMUST00000104252 74 ntBASIC1.72□□□□□ -2.13
Ubp1Q811S7 Gm25014-201ENSMUST00000158401 103 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms