Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm24238-201ENSMUST00000157792 98 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Gm26369-201ENSMUST00000157825 100 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Gm24851-201ENSMUST00000158028 103 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Mir5619-201ENSMUST00000176065 61 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Gm24801-201ENSMUST00000178503 105 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Mir34c-201ENSMUST00000083653 77 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.93□□□□□ -2.1
Trim28Q62318 Gm22386-201ENSMUST00000158192 129 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 Gm20477-201ENSMUST00000174028 280 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 Gm23369-201ENSMUST00000175406 105 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 Mir7683-201ENSMUST00000183842 61 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 Trbv25-201ENSMUST00000194700 273 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 Gm3702-201ENSMUST00000211754 346 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 Gm26441-201ENSMUST00000082590 104 ntBASIC1.93□□□□□ -2.1
Trim28Q62318 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.93□□□□□ -2.1
Trim28Q62318 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trim28Q62318 Mir8116-201ENSMUST00000184134 97 ntBASIC1.92□□□□□ -2.1
Trim28Q62318 Mir6388-201ENSMUST00000184417 75 ntBASIC1.92□□□□□ -2.1
Trim28Q62318 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.92□□□□□ -2.1
Trim28Q62318 Gm25337-201ENSMUST00000083723 104 ntBASIC1.92□□□□□ -2.1
Trim28Q62318 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trim28Q62318 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trim28Q62318 Mir764-201ENSMUST00000103259 108 ntBASIC1.91□□□□□ -2.1
Trim28Q62318 Gm24406-201ENSMUST00000083026 128 ntBASIC1.91□□□□□ -2.1
Trim28Q62318 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Trim28Q62318 Mir223-201ENSMUST00000102112 110 ntBASIC1.9□□□□□ -2.11
Trim28Q62318 Gm23967-201ENSMUST00000175062 78 ntBASIC1.9□□□□□ -2.11
Trim28Q62318 Gm25035-201ENSMUST00000175414 77 ntBASIC1.9□□□□□ -2.11
Trim28Q62318 Gm25229-201ENSMUST00000178587 79 ntBASIC1.9□□□□□ -2.11
Trim28Q62318 Gm25730-201ENSMUST00000178753 165 ntBASIC1.9□□□□□ -2.11
Trim28Q62318 Gm42935-201ENSMUST00000202004 151 ntBASIC1.9□□□□□ -2.11
Trim28Q62318 Gm22458-201ENSMUST00000082576 107 ntBASIC1.9□□□□□ -2.11
Trim28Q62318 Gm25061-201ENSMUST00000104665 107 ntBASIC1.89□□□□□ -2.11
Trim28Q62318 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.89□□□□□ -2.11
Trim28Q62318 Gm22551-201ENSMUST00000157795 103 ntBASIC1.89□□□□□ -2.11
Trim28Q62318 Gm23221-201ENSMUST00000158118 93 ntBASIC1.89□□□□□ -2.11
Trim28Q62318 Gm24805-201ENSMUST00000082931 104 ntBASIC1.89□□□□□ -2.11
Trim28Q62318 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Trim28Q62318 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim28Q62318 Mir880-201ENSMUST00000104809 78 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm23122-201ENSMUST00000157645 103 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm22425-201ENSMUST00000158532 138 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm25750-201ENSMUST00000175483 112 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm26398-201ENSMUST00000179015 127 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm20108-201ENSMUST00000219977 153 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm25696-201ENSMUST00000082900 105 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm24527-201ENSMUST00000082920 107 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Snora3-201ENSMUST00000083082 132 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm26123-201ENSMUST00000083363 135 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm23100-201ENSMUST00000083455 141 ntBASIC1.88□□□□□ -2.11
Trim28Q62318 Gm23528-201ENSMUST00000104571 132 ntBASIC1.87□□□□□ -2.11
Trim28Q62318 Gm25635-201ENSMUST00000082675 131 ntBASIC1.87□□□□□ -2.11
Trim28Q62318 Mir410-201ENSMUST00000083563 81 ntBASIC1.87□□□□□ -2.11
Trim28Q62318 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.87□□□□□ -2.11
Trim28Q62318 Gm22999-201ENSMUST00000157082 88 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 Gm25950-201ENSMUST00000175331 100 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 Mir6995-201ENSMUST00000183658 71 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 Gm27975-201ENSMUST00000184400 101 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 Gm44462-201ENSMUST00000199696 129 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.86□□□□□ -2.11
Trim28Q62318 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trim28Q62318 Gm22677-201ENSMUST00000116977 108 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm23336-201ENSMUST00000117023 123 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm11248-201ENSMUST00000119568 201 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm23656-201ENSMUST00000122626 112 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm22522-201ENSMUST00000158271 151 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm26213-201ENSMUST00000158582 110 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm25740-201ENSMUST00000180247 107 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Mir6369-201ENSMUST00000183772 106 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm27639-201ENSMUST00000184937 85 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm44384-201ENSMUST00000200208 114 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.85□□□□□ -2.11
Trim28Q62318 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.85□□□□□ -2.11
Trim28Q62318 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.84□□□□□ -2.11
Trim28Q62318 Mir873a-201ENSMUST00000104863 77 ntBASIC1.84□□□□□ -2.11
Trim28Q62318 Mir1187-201ENSMUST00000116936 122 ntBASIC1.84□□□□□ -2.11
Trim28Q62318 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.84□□□□□ -2.11
Trim28Q62318 Gm24880-201ENSMUST00000158776 85 ntBASIC1.84□□□□□ -2.11
Trim28Q62318 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trim28Q62318 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trim28Q62318 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trim28Q62318 Gm24064-201ENSMUST00000157486 106 ntBASIC1.83□□□□□ -2.12
Trim28Q62318 Gm23996-201ENSMUST00000158062 131 ntBASIC1.83□□□□□ -2.12
Trim28Q62318 Mir1950-201ENSMUST00000158526 74 ntBASIC1.83□□□□□ -2.12
Trim28Q62318 Gm22140-201ENSMUST00000158745 120 ntBASIC1.83□□□□□ -2.12
Trim28Q62318 Gm16307-201ENSMUST00000161269 210 ntBASIC1.83□□□□□ -2.12
Trim28Q62318 Gm23714-201ENSMUST00000179259 105 ntBASIC1.83□□□□□ -2.12
Trim28Q62318 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trim28Q62318 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trim28Q62318 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.82□□□□□ -2.12
Trim28Q62318 Gm25354-201ENSMUST00000179110 105 ntBASIC1.82□□□□□ -2.12
Trim28Q62318 Gm45754-201ENSMUST00000212380 279 ntBASIC1.82□□□□□ -2.12
Trim28Q62318 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.82□□□□□ -2.12
Trim28Q62318 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trim28Q62318 Gm11333-201ENSMUST00000119479 148 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 178.1 ms