Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm22403-201ENSMUST00000174919 84 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm25380-201ENSMUST00000175463 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm26498-201ENSMUST00000177799 79 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm24641-201ENSMUST00000178055 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm25484-201ENSMUST00000178217 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm26138-201ENSMUST00000179236 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm22821-201ENSMUST00000179288 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm26230-201ENSMUST00000180141 79 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm23298-201ENSMUST00000083181 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm24614-201ENSMUST00000083269 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm22057-201ENSMUST00000083387 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm25516-201ENSMUST00000083857 107 ntBASIC1.42□□□□□ -2.18
CtcfQ61164 Gm11857-201ENSMUST00000119817 324 ntBASIC1.41□□□□□ -2.18
CtcfQ61164 Gm16399-201ENSMUST00000181423 219 ntBASIC1.41□□□□□ -2.18
CtcfQ61164 Gm43324-201ENSMUST00000197482 289 ntBASIC1.41□□□□□ -2.18
CtcfQ61164 Gm42795-201ENSMUST00000198847 76 ntBASIC1.41□□□□□ -2.18
CtcfQ61164 Snord96a-201ENSMUST00000082791 81 ntBASIC1.41□□□□□ -2.18
CtcfQ61164 Gm24865-201ENSMUST00000103246 96 ntBASIC1.4□□□□□ -2.19
CtcfQ61164 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CtcfQ61164 Gm11792-201ENSMUST00000120640 168 ntBASIC1.4□□□□□ -2.19
CtcfQ61164 Gm24913-201ENSMUST00000157286 107 ntBASIC1.4□□□□□ -2.19
CtcfQ61164 Gm22485-201ENSMUST00000157990 109 ntBASIC1.4□□□□□ -2.19
CtcfQ61164 Mir7063-201ENSMUST00000184158 91 ntBASIC1.4□□□□□ -2.19
CtcfQ61164 Snora41-201ENSMUST00000082668 132 ntBASIC1.4□□□□□ -2.19
CtcfQ61164 Gm23245-201ENSMUST00000083370 135 ntBASIC1.4□□□□□ -2.19
CtcfQ61164 Mir343-201ENSMUST00000102360 75 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 Gm23654-201ENSMUST00000116758 126 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 Gm22999-201ENSMUST00000157082 88 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 Gm24238-201ENSMUST00000157792 98 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 Mir6377-201ENSMUST00000183760 114 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 Gm23507-201ENSMUST00000083078 107 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.39□□□□□ -2.19
CtcfQ61164 Gm22004-201ENSMUST00000101884 107 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm22772-201ENSMUST00000104451 121 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Mir654-201ENSMUST00000104787 84 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm22944-201ENSMUST00000158662 133 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm22663-201ENSMUST00000158721 102 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm24877-201ENSMUST00000158779 116 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm28270-201ENSMUST00000188550 109 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm28328-201ENSMUST00000188869 109 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm25128-201ENSMUST00000083339 76 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.38□□□□□ -2.19
CtcfQ61164 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CtcfQ61164 Mir450b-201ENSMUST00000102095 82 ntBASIC1.37□□□□□ -2.19
CtcfQ61164 Gm23083-201ENSMUST00000157851 116 ntBASIC1.37□□□□□ -2.19
CtcfQ61164 Gm25949-201ENSMUST00000175333 114 ntBASIC1.37□□□□□ -2.19
CtcfQ61164 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcfQ61164 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.37□□□□□ -2.19
CtcfQ61164 Gm24523-201ENSMUST00000083965 132 ntBASIC1.37□□□□□ -2.19
CtcfQ61164 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CtcfQ61164 Gm25611-201ENSMUST00000104017 133 ntBASIC1.36□□□□□ -2.19
CtcfQ61164 Gm24880-201ENSMUST00000158776 85 ntBASIC1.36□□□□□ -2.19
CtcfQ61164 Gm16539-201ENSMUST00000160086 327 ntBASIC1.36□□□□□ -2.19
CtcfQ61164 Gm25678-201ENSMUST00000174984 73 ntBASIC1.36□□□□□ -2.19
CtcfQ61164 Gm22638-201ENSMUST00000179674 107 ntBASIC1.36□□□□□ -2.19
CtcfQ61164 Gm45429-201ENSMUST00000209527 172 ntBASIC1.36□□□□□ -2.19
CtcfQ61164 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CtcfQ61164 Snord78-201ENSMUST00000104032 66 ntBASIC1.35□□□□□ -2.19
CtcfQ61164 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CtcfQ61164 Gm24588-201ENSMUST00000116696 83 ntBASIC1.35□□□□□ -2.19
CtcfQ61164 Gm25544-201ENSMUST00000122676 120 ntBASIC1.35□□□□□ -2.19
CtcfQ61164 Gm22845-201ENSMUST00000157712 104 ntBASIC1.35□□□□□ -2.19
CtcfQ61164 Gm27645-201ENSMUST00000183348 77 ntBASIC1.35□□□□□ -2.19
CtcfQ61164 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CtcfQ61164 Gm26123-201ENSMUST00000083363 135 ntBASIC1.35□□□□□ -2.19
CtcfQ61164 Gm24468-201ENSMUST00000104489 104 ntBASIC1.34□□□□□ -2.19
CtcfQ61164 Gm24808-201ENSMUST00000157993 118 ntBASIC1.34□□□□□ -2.19
CtcfQ61164 Gm22425-201ENSMUST00000158532 138 ntBASIC1.34□□□□□ -2.19
CtcfQ61164 Gm23375-201ENSMUST00000175407 83 ntBASIC1.34□□□□□ -2.19
CtcfQ61164 Gm44807-201ENSMUST00000206115 154 ntBASIC1.34□□□□□ -2.19
CtcfQ61164 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.34□□□□□ -2.19
CtcfQ61164 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
CtcfQ61164 Gm25393-201ENSMUST00000157336 285 ntBASIC1.33□□□□□ -2.2
CtcfQ61164 Gm25241-201ENSMUST00000174909 84 ntBASIC1.33□□□□□ -2.2
CtcfQ61164 Gm26217-201ENSMUST00000175212 84 ntBASIC1.33□□□□□ -2.2
CtcfQ61164 Gm25247-201ENSMUST00000175475 90 ntBASIC1.33□□□□□ -2.2
CtcfQ61164 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.33□□□□□ -2.2
CtcfQ61164 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.33□□□□□ -2.2
CtcfQ61164 Gm11248-201ENSMUST00000119568 201 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 Gm26089-201ENSMUST00000157898 107 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 Gm25978-201ENSMUST00000158698 90 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 Traj61-201ENSMUST00000165025 72 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 Mir3098-201ENSMUST00000175416 87 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 Gm28256-201ENSMUST00000188953 139 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 Gm28559-201ENSMUST00000190532 139 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.32□□□□□ -2.2
CtcfQ61164 Snora24-201ENSMUST00000174989 130 ntBASIC1.31□□□□□ -2.2
CtcfQ61164 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CtcfQ61164 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.31□□□□□ -2.2
CtcfQ61164 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CtcfQ61164 Gm25416-201ENSMUST00000104221 107 ntBASIC1.3□□□□□ -2.2
CtcfQ61164 Gm25680-201ENSMUST00000116917 126 ntBASIC1.3□□□□□ -2.2
CtcfQ61164 Gm22635-201ENSMUST00000116962 126 ntBASIC1.3□□□□□ -2.2
CtcfQ61164 Gm25329-201ENSMUST00000158041 126 ntBASIC1.3□□□□□ -2.2
CtcfQ61164 Gm25011-201ENSMUST00000158398 126 ntBASIC1.3□□□□□ -2.2
CtcfQ61164 Gm22200-201ENSMUST00000158614 67 ntBASIC1.3□□□□□ -2.2
CtcfQ61164 Gm27607-201ENSMUST00000185162 122 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 159.9 ms