Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm25267-201ENSMUST00000158522 63 ntBASIC-1.21□□□□□ -2.6
Trav5d-4Q5R1F6 Gm38280-201ENSMUST00000192610 158 ntBASIC-1.21□□□□□ -2.6
Trav5d-4Q5R1F6 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.22□□□□□ -2.6
Trav5d-4Q5R1F6 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.22□□□□□ -2.6
Trav5d-4Q5R1F6 Gm25664-201ENSMUST00000157697 107 ntBASIC-1.22□□□□□ -2.6
Trav5d-4Q5R1F6 Gm22557-201ENSMUST00000157804 102 ntBASIC-1.22□□□□□ -2.6
Trav5d-4Q5R1F6 Gm26287-201ENSMUST00000158887 81 ntBASIC-1.22□□□□□ -2.6
Trav5d-4Q5R1F6 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.22□□□□□ -2.6
Trav5d-4Q5R1F6 Mir489-201ENSMUST00000093599 107 ntBASIC-1.22□□□□□ -2.6
Trav5d-4Q5R1F6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Gm11204-201ENSMUST00000122438 147 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Gm23219-201ENSMUST00000158123 87 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Gm26398-201ENSMUST00000179015 127 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Mir7093-201ENSMUST00000184195 101 ntBASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
Trav5d-4Q5R1F6 Gm12686-201ENSMUST00000120546 397 ntBASIC-1.24□□□□□ -2.61
Trav5d-4Q5R1F6 Gm12924-201ENSMUST00000121747 318 ntBASIC-1.24□□□□□ -2.61
Trav5d-4Q5R1F6 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.24□□□□□ -2.61
Trav5d-4Q5R1F6 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.24□□□□□ -2.61
Trav5d-4Q5R1F6 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.24□□□□□ -2.61
Trav5d-4Q5R1F6 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-1.24□□□□□ -2.61
Trav5d-4Q5R1F6 Gm45313-201ENSMUST00000210584 178 ntBASIC-1.24□□□□□ -2.61
Trav5d-4Q5R1F6 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.25□□□□□ -2.61
Trav5d-4Q5R1F6 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
Trav5d-4Q5R1F6 AC154552.1-201ENSMUST00000222969 202 ntBASIC-1.25□□□□□ -2.61
Trav5d-4Q5R1F6 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.25□□□□□ -2.61
Trav5d-4Q5R1F6 Mir9-2-201ENSMUST00000083490 72 ntBASIC-1.25□□□□□ -2.61
Trav5d-4Q5R1F6 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.26□□□□□ -2.61
Trav5d-4Q5R1F6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.26□□□□□ -2.61
Trav5d-4Q5R1F6 Gm22555-201ENSMUST00000157801 62 ntBASIC-1.26□□□□□ -2.61
Trav5d-4Q5R1F6 Gm28008-201ENSMUST00000184021 186 ntBASIC-1.26□□□□□ -2.61
Trav5d-4Q5R1F6 Gm45005-201ENSMUST00000206640 157 ntBASIC-1.26□□□□□ -2.61
Trav5d-4Q5R1F6 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.27□□□□□ -2.61
Trav5d-4Q5R1F6 Mir378c-201ENSMUST00000184478 99 ntBASIC-1.27□□□□□ -2.61
Trav5d-4Q5R1F6 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-1.27□□□□□ -2.61
Trav5d-4Q5R1F6 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.27□□□□□ -2.61
Trav5d-4Q5R1F6 Gm23242-201ENSMUST00000083055 107 ntBASIC-1.27□□□□□ -2.61
Trav5d-4Q5R1F6 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.28□□□□□ -2.61
Trav5d-4Q5R1F6 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.28□□□□□ -2.61
Trav5d-4Q5R1F6 AC154296.2-201ENSMUST00000214696 545 ntBASIC-1.28□□□□□ -2.61
Trav5d-4Q5R1F6 AC192091.2-201ENSMUST00000217869 117 ntBASIC-1.28□□□□□ -2.61
Trav5d-4Q5R1F6 Gm25235-201ENSMUST00000179933 107 ntBASIC-1.29□□□□□ -2.62
Trav5d-4Q5R1F6 Gm11694-201ENSMUST00000118637 159 ntBASIC-1.3□□□□□ -2.62
Trav5d-4Q5R1F6 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.3□□□□□ -2.62
Trav5d-4Q5R1F6 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.3□□□□□ -2.62
Trav5d-4Q5R1F6 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.3□□□□□ -2.62
Trav5d-4Q5R1F6 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.3□□□□□ -2.62
Trav5d-4Q5R1F6 Mir186-201ENSMUST00000083497 71 ntBASIC-1.3□□□□□ -2.62
Trav5d-4Q5R1F6 Gm24423-201ENSMUST00000101982 106 ntBASIC-1.31□□□□□ -2.62
Trav5d-4Q5R1F6 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.31□□□□□ -2.62
Trav5d-4Q5R1F6 Snora26-201ENSMUST00000175614 121 ntBASIC-1.31□□□□□ -2.62
Trav5d-4Q5R1F6 Gm27446-201ENSMUST00000183963 89 ntBASIC-1.31□□□□□ -2.62
Trav5d-4Q5R1F6 AC153526.1-201ENSMUST00000219750 190 ntBASIC-1.31□□□□□ -2.62
Trav5d-4Q5R1F6 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.32□□□□□ -2.62
Trav5d-4Q5R1F6 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.32□□□□□ -2.62
Trav5d-4Q5R1F6 Gm23059-201ENSMUST00000158978 107 ntBASIC-1.32□□□□□ -2.62
Trav5d-4Q5R1F6 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.33□□□□□ -2.62
Trav5d-4Q5R1F6 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-1.33□□□□□ -2.62
Trav5d-4Q5R1F6 n-R5s87-201ENSMUST00000122752 116 ntBASIC-1.33□□□□□ -2.62
Trav5d-4Q5R1F6 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.33□□□□□ -2.62
Trav5d-4Q5R1F6 Mir5624-201ENSMUST00000176635 61 ntBASIC-1.33□□□□□ -2.62
Trav5d-4Q5R1F6 AC154213.2-201ENSMUST00000227138 187 ntBASIC-1.33□□□□□ -2.62
Trav5d-4Q5R1F6 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-1.33□□□□□ -2.62
Trav5d-4Q5R1F6 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.34□□□□□ -2.62
Trav5d-4Q5R1F6 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.34□□□□□ -2.62
Trav5d-4Q5R1F6 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
Trav5d-4Q5R1F6 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.34□□□□□ -2.62
Trav5d-4Q5R1F6 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.34□□□□□ -2.62
Trav5d-4Q5R1F6 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-1.34□□□□□ -2.62
Trav5d-4Q5R1F6 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.35□□□□□ -2.63
Trav5d-4Q5R1F6 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.36□□□□□ -2.63
Trav5d-4Q5R1F6 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.36□□□□□ -2.63
Trav5d-4Q5R1F6 AC134601.1-201ENSMUST00000221058 109 ntBASIC-1.36□□□□□ -2.63
Trav5d-4Q5R1F6 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.36□□□□□ -2.63
Trav5d-4Q5R1F6 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.36□□□□□ -2.63
Trav5d-4Q5R1F6 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.36□□□□□ -2.63
Trav5d-4Q5R1F6 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.37□□□□□ -2.63
Trav5d-4Q5R1F6 Gm27585-201ENSMUST00000183717 199 ntBASIC-1.37□□□□□ -2.63
Trav5d-4Q5R1F6 AC124687.1-201ENSMUST00000221868 189 ntBASIC-1.37□□□□□ -2.63
Trav5d-4Q5R1F6 Gm25337-201ENSMUST00000083723 104 ntBASIC-1.37□□□□□ -2.63
Trav5d-4Q5R1F6 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.37□□□□□ -2.63
Trav5d-4Q5R1F6 Gm23941-201ENSMUST00000101953 107 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 Gm25055-201ENSMUST00000157369 76 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 Gm22850-201ENSMUST00000157714 82 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 Gm23186-201ENSMUST00000180078 107 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 AC166341.3-201ENSMUST00000221861 114 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 Gm26168-201ENSMUST00000083787 112 ntBASIC-1.38□□□□□ -2.63
Trav5d-4Q5R1F6 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.39□□□□□ -2.63
Trav5d-4Q5R1F6 Gm23320-201ENSMUST00000104462 127 ntBASIC-1.39□□□□□ -2.63
Trav5d-4Q5R1F6 Snord2-201ENSMUST00000157899 69 ntBASIC-1.39□□□□□ -2.63
Trav5d-4Q5R1F6 Gm22946-201ENSMUST00000158558 82 ntBASIC-1.39□□□□□ -2.63
Trav5d-4Q5R1F6 Gm27521-201ENSMUST00000184022 64 ntBASIC-1.39□□□□□ -2.63
Trav5d-4Q5R1F6 Gm43907-201ENSMUST00000203128 117 ntBASIC-1.39□□□□□ -2.63
Trav5d-4Q5R1F6 Gm25895-201ENSMUST00000083714 100 ntBASIC-1.39□□□□□ -2.63
Trav5d-4Q5R1F6 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 188.2 ms