Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm25274-201ENSMUST00000104296 135 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Gm24232-201ENSMUST00000104314 132 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Mir1298-201ENSMUST00000116681 98 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Gm22967-201ENSMUST00000157956 239 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Gm25600-201ENSMUST00000158357 106 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Gm26403-201ENSMUST00000158500 105 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Mir8107-201ENSMUST00000184024 117 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Mir6985-201ENSMUST00000184641 61 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Gm44458-201ENSMUST00000196594 143 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Gm44922-201ENSMUST00000206690 90 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.07□□□□□ -2.4
Trav6-3Q5R1E6 Gm24290-201ENSMUST00000157634 96 ntBASIC0.06□□□□□ -2.4
Trav6-3Q5R1E6 Gm25693-201ENSMUST00000175443 85 ntBASIC0.06□□□□□ -2.4
Trav6-3Q5R1E6 Gm28001-201ENSMUST00000183561 117 ntBASIC0.06□□□□□ -2.4
Trav6-3Q5R1E6 Gm26202-201ENSMUST00000082910 65 ntBASIC0.06□□□□□ -2.4
Trav6-3Q5R1E6 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm24233-201ENSMUST00000104317 122 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm25980-201ENSMUST00000157176 218 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Mir3094-201ENSMUST00000175121 64 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm22258-201ENSMUST00000177645 94 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm26032-201ENSMUST00000178535 94 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm25210-201ENSMUST00000178813 94 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm25157-201ENSMUST00000178914 94 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm22046-201ENSMUST00000179027 94 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm22941-201ENSMUST00000179630 94 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm25471-201ENSMUST00000180126 94 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm27803-201ENSMUST00000183763 119 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm28724-201ENSMUST00000186149 625 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm22303-201ENSMUST00000082686 122 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Mir471-201ENSMUST00000093596 67 ntBASIC0.05□□□□□ -2.4
Trav6-3Q5R1E6 Gm13065-201ENSMUST00000119178 141 ntBASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Gm23761-201ENSMUST00000158347 104 ntBASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Gm25974-201ENSMUST00000158701 94 ntBASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Gm24223-201ENSMUST00000158827 90 ntBASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Gm25136-201ENSMUST00000083253 115 ntBASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Mir224-201ENSMUST00000083608 82 ntBASIC0.04□□□□□ -2.4
Trav6-3Q5R1E6 Gm24379-201ENSMUST00000122695 86 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Gm22348-201ENSMUST00000178674 79 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Gm18665-201ENSMUST00000189783 270 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Mir376b-201ENSMUST00000195930 82 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Gm44338-201ENSMUST00000198614 110 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Gm23303-201ENSMUST00000082714 152 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Gm23461-201ENSMUST00000083265 107 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.03□□□□□ -2.4
Trav6-3Q5R1E6 Gm44489-201ENSMUST00000104619 97 ntBASIC0.02□□□□□ -2.41
Trav6-3Q5R1E6 Gm24835-201ENSMUST00000116777 111 ntBASIC0.02□□□□□ -2.41
Trav6-3Q5R1E6 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.02□□□□□ -2.41
Trav6-3Q5R1E6 Gm23126-201ENSMUST00000104260 134 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Gm22149-201ENSMUST00000104442 136 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Mir1898-201ENSMUST00000122643 83 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Mir7077-201ENSMUST00000183991 57 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Snora75-201ENSMUST00000082903 133 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Gm25006-201ENSMUST00000083813 107 ntBASIC0.01□□□□□ -2.41
Trav6-3Q5R1E6 Gm37624-201ENSMUST00000193751 219 ntBASIC0□□□□□ -2.41
Trav6-3Q5R1E6 Gm23445-201ENSMUST00000082800 107 ntBASIC0□□□□□ -2.41
Trav6-3Q5R1E6 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.01□□□□□ -2.41
Trav6-3Q5R1E6 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.01□□□□□ -2.41
Trav6-3Q5R1E6 Gm26097-201ENSMUST00000179642 93 ntBASIC-0.01□□□□□ -2.41
Trav6-3Q5R1E6 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav6-3Q5R1E6 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.02□□□□□ -2.41
Trav6-3Q5R1E6 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.02□□□□□ -2.41
Trav6-3Q5R1E6 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.02□□□□□ -2.41
Trav6-3Q5R1E6 Gm24054-201ENSMUST00000158619 105 ntBASIC-0.02□□□□□ -2.41
Trav6-3Q5R1E6 Gm23337-201ENSMUST00000158959 118 ntBASIC-0.02□□□□□ -2.41
Trav6-3Q5R1E6 AC161426.1-201ENSMUST00000214137 286 ntBASIC-0.02□□□□□ -2.41
Trav6-3Q5R1E6 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.02□□□□□ -2.41
Trav6-3Q5R1E6 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm23209-201ENSMUST00000158667 110 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm26092-201ENSMUST00000179798 97 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 mt-Td-201ENSMUST00000082404 70 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.03□□□□□ -2.41
Trav6-3Q5R1E6 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm24131-201ENSMUST00000158539 107 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm23423-201ENSMUST00000082782 106 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Snord95-201ENSMUST00000082846 68 ntBASIC-0.04□□□□□ -2.42
Trav6-3Q5R1E6 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.05□□□□□ -2.42
Trav6-3Q5R1E6 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.05□□□□□ -2.42
Trav6-3Q5R1E6 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.05□□□□□ -2.42
Trav6-3Q5R1E6 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.05□□□□□ -2.42
Trav6-3Q5R1E6 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 325.7 ms