Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Snord71-201ENSMUST00000104361 85 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Gm26018-201ENSMUST00000104406 128 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Mir1191-201ENSMUST00000116883 120 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Mir100-201ENSMUST00000175270 80 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Gm25081-201ENSMUST00000082534 108 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Mir377-201ENSMUST00000083504 68 ntBASIC0.39□□□□□ -2.35
Trdv4Q5R1A3 Gm26303-201ENSMUST00000116845 119 ntBASIC0.38□□□□□ -2.35
Trdv4Q5R1A3 Gm25300-201ENSMUST00000175284 84 ntBASIC0.38□□□□□ -2.35
Trdv4Q5R1A3 Gm27993-201ENSMUST00000184362 85 ntBASIC0.38□□□□□ -2.35
Trdv4Q5R1A3 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.38□□□□□ -2.35
Trdv4Q5R1A3 Gm25814-201ENSMUST00000082754 107 ntBASIC0.38□□□□□ -2.35
Trdv4Q5R1A3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.38□□□□□ -2.35
Trdv4Q5R1A3 Gm24683-201ENSMUST00000104840 88 ntBASIC0.37□□□□□ -2.35
Trdv4Q5R1A3 Gm12469-201ENSMUST00000117623 207 ntBASIC0.37□□□□□ -2.35
Trdv4Q5R1A3 Gm24246-201ENSMUST00000157315 132 ntBASIC0.37□□□□□ -2.35
Trdv4Q5R1A3 Mir6342-201ENSMUST00000183870 125 ntBASIC0.37□□□□□ -2.35
Trdv4Q5R1A3 Gm37330-201ENSMUST00000192606 153 ntBASIC0.37□□□□□ -2.35
Trdv4Q5R1A3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Gm22520-201ENSMUST00000158269 129 ntBASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Gm26290-201ENSMUST00000158891 145 ntBASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Mir669j-201ENSMUST00000179023 121 ntBASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Gm44322-201ENSMUST00000196830 115 ntBASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Gm44469-201ENSMUST00000198558 79 ntBASIC0.36□□□□□ -2.35
Trdv4Q5R1A3 Gm23988-201ENSMUST00000117034 122 ntBASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm24223-201ENSMUST00000158827 90 ntBASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm22565-201ENSMUST00000175540 69 ntBASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Mir7010-201ENSMUST00000183464 63 ntBASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm27699-201ENSMUST00000183553 180 ntBASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm25894-201ENSMUST00000083458 75 ntBASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm24258-201ENSMUST00000083739 133 ntBASIC0.35□□□□□ -2.35
Trdv4Q5R1A3 Gm24141-201ENSMUST00000122776 115 ntBASIC0.34□□□□□ -2.36
Trdv4Q5R1A3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.34□□□□□ -2.36
Trdv4Q5R1A3 Gm26412-201ENSMUST00000157666 55 ntBASIC0.34□□□□□ -2.36
Trdv4Q5R1A3 Gm23260-201ENSMUST00000158317 172 ntBASIC0.34□□□□□ -2.36
Trdv4Q5R1A3 Gm25693-201ENSMUST00000175443 85 ntBASIC0.34□□□□□ -2.36
Trdv4Q5R1A3 Gm22911-201ENSMUST00000177920 107 ntBASIC0.34□□□□□ -2.36
Trdv4Q5R1A3 Mir6481-201ENSMUST00000184617 110 ntBASIC0.34□□□□□ -2.36
Trdv4Q5R1A3 Gm22673-201ENSMUST00000104415 131 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm22030-201ENSMUST00000116942 63 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm24718-201ENSMUST00000157521 136 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm24717-201ENSMUST00000157522 124 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm22349-201ENSMUST00000157864 107 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm22706-201ENSMUST00000157907 112 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm44602-201ENSMUST00000205948 132 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm45492-201ENSMUST00000211611 288 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm23301-201ENSMUST00000082713 65 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Mir410-201ENSMUST00000083563 81 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Mir10b-201ENSMUST00000083566 68 ntBASIC0.33□□□□□ -2.36
Trdv4Q5R1A3 Gm24263-201ENSMUST00000104059 107 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm22469-201ENSMUST00000104118 133 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm25393-201ENSMUST00000157336 285 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm24290-201ENSMUST00000157634 96 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm26084-201ENSMUST00000157903 104 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm25600-201ENSMUST00000158357 106 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm24129-201ENSMUST00000158537 97 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Traj61-201ENSMUST00000165025 72 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm27668-201ENSMUST00000184188 120 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm26379-202ENSMUST00000200225 132 ntBASIC0.32□□□□□ -2.36
Trdv4Q5R1A3 Gm11248-201ENSMUST00000119568 201 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm16186-201ENSMUST00000120132 216 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm29535-201ENSMUST00000185723 109 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm28143-201ENSMUST00000191082 109 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm44455-201ENSMUST00000200061 82 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm42506-201ENSMUST00000202009 150 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm45541-201ENSMUST00000210443 54 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm25899-201ENSMUST00000082672 141 ntBASIC0.31□□□□□ -2.36
Trdv4Q5R1A3 Gm25170-201ENSMUST00000104191 129 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm23991-201ENSMUST00000117033 93 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm25367-201ENSMUST00000158846 106 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm23008-201ENSMUST00000158946 80 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Mir1949-202ENSMUST00000199259 70 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm23722-201ENSMUST00000083002 130 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm26168-201ENSMUST00000083787 112 ntBASIC0.3□□□□□ -2.36
Trdv4Q5R1A3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm25091-201ENSMUST00000103997 71 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm25274-201ENSMUST00000104296 135 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms