Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.14□□□□□ -2.43
Col27a1Q5QNQ9 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.14□□□□□ -2.43
Col27a1Q5QNQ9 Mir18-201ENSMUST00000083469 96 ntBASIC-0.14□□□□□ -2.43
Col27a1Q5QNQ9 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.14□□□□□ -2.43
Col27a1Q5QNQ9 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.15□□□□□ -2.43
Col27a1Q5QNQ9 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.16□□□□□ -2.44
Col27a1Q5QNQ9 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm25135-201ENSMUST00000082648 143 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm25895-201ENSMUST00000083714 100 ntBASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.17□□□□□ -2.44
Col27a1Q5QNQ9 Mir541-201ENSMUST00000102097 90 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Snord19-201ENSMUST00000104609 76 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.18□□□□□ -2.44
Col27a1Q5QNQ9 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.19□□□□□ -2.44
Col27a1Q5QNQ9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
Col27a1Q5QNQ9 Mir489-201ENSMUST00000093599 107 ntBASIC-0.19□□□□□ -2.44
Col27a1Q5QNQ9 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 mt-Tr-201ENSMUST00000082412 68 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Snora15-201ENSMUST00000177461 131 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.2□□□□□ -2.44
Col27a1Q5QNQ9 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.21□□□□□ -2.44
Col27a1Q5QNQ9 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.21□□□□□ -2.44
Col27a1Q5QNQ9 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.21□□□□□ -2.44
Col27a1Q5QNQ9 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.21□□□□□ -2.44
Col27a1Q5QNQ9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Col27a1Q5QNQ9 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.22□□□□□ -2.44
Col27a1Q5QNQ9 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.22□□□□□ -2.44
Col27a1Q5QNQ9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.22□□□□□ -2.44
Col27a1Q5QNQ9 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.22□□□□□ -2.44
Col27a1Q5QNQ9 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.22□□□□□ -2.45
Col27a1Q5QNQ9 Gm25362-201ENSMUST00000158854 105 ntBASIC-0.22□□□□□ -2.45
Col27a1Q5QNQ9 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.22□□□□□ -2.45
Col27a1Q5QNQ9 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.22□□□□□ -2.45
Col27a1Q5QNQ9 AC109214.2-201ENSMUST00000220089 358 ntBASIC-0.22□□□□□ -2.45
Col27a1Q5QNQ9 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.23□□□□□ -2.45
Col27a1Q5QNQ9 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-0.23□□□□□ -2.45
Col27a1Q5QNQ9 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.23□□□□□ -2.45
Col27a1Q5QNQ9 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.23□□□□□ -2.45
Col27a1Q5QNQ9 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.23□□□□□ -2.45
Col27a1Q5QNQ9 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.23□□□□□ -2.45
Col27a1Q5QNQ9 Gm23679-201ENSMUST00000083161 119 ntBASIC-0.23□□□□□ -2.45
Col27a1Q5QNQ9 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm13339-201ENSMUST00000120651 510 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.24□□□□□ -2.45
Col27a1Q5QNQ9 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.25□□□□□ -2.45
Col27a1Q5QNQ9 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.25□□□□□ -2.45
Col27a1Q5QNQ9 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.25□□□□□ -2.45
Col27a1Q5QNQ9 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.25□□□□□ -2.45
Col27a1Q5QNQ9 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 204.6 ms