Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm12469-201ENSMUST00000117623 207 ntBASIC0.44□□□□□ -2.34
Trim40Q3UWA4 Gm25060-201ENSMUST00000157374 130 ntBASIC0.44□□□□□ -2.34
Trim40Q3UWA4 Gm23504-201ENSMUST00000158988 95 ntBASIC0.44□□□□□ -2.34
Trim40Q3UWA4 Gm25300-201ENSMUST00000175284 84 ntBASIC0.44□□□□□ -2.34
Trim40Q3UWA4 Mir3968-201ENSMUST00000175355 100 ntBASIC0.44□□□□□ -2.34
Trim40Q3UWA4 Gm23714-201ENSMUST00000179259 105 ntBASIC0.44□□□□□ -2.34
Trim40Q3UWA4 Gm24920-201ENSMUST00000083018 85 ntBASIC0.44□□□□□ -2.34
Trim40Q3UWA4 Gm24323-201ENSMUST00000175342 77 ntBASIC0.43□□□□□ -2.34
Trim40Q3UWA4 Mir6389-201ENSMUST00000183661 102 ntBASIC0.43□□□□□ -2.34
Trim40Q3UWA4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.43□□□□□ -2.34
Trim40Q3UWA4 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.43□□□□□ -2.34
Trim40Q3UWA4 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.43□□□□□ -2.34
Trim40Q3UWA4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.42□□□□□ -2.34
Trim40Q3UWA4 Gm43749-201ENSMUST00000199345 352 ntBASIC0.42□□□□□ -2.34
Trim40Q3UWA4 Gm22520-201ENSMUST00000158269 129 ntBASIC0.41□□□□□ -2.34
Trim40Q3UWA4 Gm24223-201ENSMUST00000158827 90 ntBASIC0.41□□□□□ -2.34
Trim40Q3UWA4 Gm27928-201ENSMUST00000183747 256 ntBASIC0.41□□□□□ -2.34
Trim40Q3UWA4 Mir669b-201ENSMUST00000102172 97 ntBASIC0.4□□□□□ -2.35
Trim40Q3UWA4 Gm26301-201ENSMUST00000104813 95 ntBASIC0.4□□□□□ -2.35
Trim40Q3UWA4 Gm25693-201ENSMUST00000175443 85 ntBASIC0.4□□□□□ -2.35
Trim40Q3UWA4 Gm44322-201ENSMUST00000196830 115 ntBASIC0.4□□□□□ -2.35
Trim40Q3UWA4 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.4□□□□□ -2.35
Trim40Q3UWA4 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.4□□□□□ -2.35
Trim40Q3UWA4 Mir6342-201ENSMUST00000183870 125 ntBASIC0.39□□□□□ -2.35
Trim40Q3UWA4 Mir8090-201ENSMUST00000185078 136 ntBASIC0.39□□□□□ -2.35
Trim40Q3UWA4 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Trim40Q3UWA4 Gm26091-201ENSMUST00000122704 82 ntBASIC0.38□□□□□ -2.35
Trim40Q3UWA4 Gm24246-201ENSMUST00000157315 132 ntBASIC0.38□□□□□ -2.35
Trim40Q3UWA4 Gm24963-201ENSMUST00000157916 144 ntBASIC0.38□□□□□ -2.35
Trim40Q3UWA4 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.38□□□□□ -2.35
Trim40Q3UWA4 Mir448-201ENSMUST00000083516 112 ntBASIC0.38□□□□□ -2.35
Trim40Q3UWA4 Gm22030-201ENSMUST00000116942 63 ntBASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm25393-201ENSMUST00000157336 285 ntBASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm24718-201ENSMUST00000157521 136 ntBASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm24290-201ENSMUST00000157634 96 ntBASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm22541-201ENSMUST00000158165 127 ntBASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm26290-201ENSMUST00000158891 145 ntBASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm26398-201ENSMUST00000179015 127 ntBASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Trim40Q3UWA4 Gm22759-201ENSMUST00000102276 96 ntBASIC0.36□□□□□ -2.35
Trim40Q3UWA4 Gm26303-201ENSMUST00000116845 119 ntBASIC0.36□□□□□ -2.35
Trim40Q3UWA4 Gm11248-201ENSMUST00000119568 201 ntBASIC0.36□□□□□ -2.35
Trim40Q3UWA4 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.36□□□□□ -2.35
Trim40Q3UWA4 Gm25600-201ENSMUST00000158357 106 ntBASIC0.36□□□□□ -2.35
Trim40Q3UWA4 Gm29535-201ENSMUST00000185723 109 ntBASIC0.36□□□□□ -2.35
Trim40Q3UWA4 Gm28143-201ENSMUST00000191082 109 ntBASIC0.36□□□□□ -2.35
Trim40Q3UWA4 Gm26018-201ENSMUST00000104406 128 ntBASIC0.35□□□□□ -2.35
Trim40Q3UWA4 Gm26084-201ENSMUST00000157903 104 ntBASIC0.35□□□□□ -2.35
Trim40Q3UWA4 Gm24129-201ENSMUST00000158537 97 ntBASIC0.35□□□□□ -2.35
Trim40Q3UWA4 Gm27656-201ENSMUST00000185055 80 ntBASIC0.35□□□□□ -2.35
Trim40Q3UWA4 Mir200a-201ENSMUST00000083466 90 ntBASIC0.35□□□□□ -2.35
Trim40Q3UWA4 Gm14775-201ENSMUST00000122089 310 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Gm23605-201ENSMUST00000157255 127 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Gm22706-201ENSMUST00000157907 112 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Traj61-201ENSMUST00000165025 72 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Mir669j-201ENSMUST00000179023 121 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Mir7014-201ENSMUST00000183853 63 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Mir7009-201ENSMUST00000184519 64 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Mir6481-201ENSMUST00000184617 110 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Mir1949-202ENSMUST00000199259 70 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Gm45541-201ENSMUST00000210443 54 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Gm25894-201ENSMUST00000083458 75 ntBASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Trim40Q3UWA4 Gm24141-201ENSMUST00000122776 115 ntBASIC0.33□□□□□ -2.36
Trim40Q3UWA4 Gm22011-201ENSMUST00000158790 123 ntBASIC0.33□□□□□ -2.36
Trim40Q3UWA4 Gm24321-201ENSMUST00000175348 80 ntBASIC0.33□□□□□ -2.36
Trim40Q3UWA4 Gm27668-201ENSMUST00000184188 120 ntBASIC0.33□□□□□ -2.36
Trim40Q3UWA4 Mir7229-201ENSMUST00000197062 53 ntBASIC0.33□□□□□ -2.36
Trim40Q3UWA4 Gm44457-201ENSMUST00000198109 76 ntBASIC0.33□□□□□ -2.36
Trim40Q3UWA4 Gm44455-201ENSMUST00000200061 82 ntBASIC0.33□□□□□ -2.36
Trim40Q3UWA4 Gm22983-201ENSMUST00000158308 104 ntBASIC0.32□□□□□ -2.36
Trim40Q3UWA4 Gm3702-201ENSMUST00000211754 346 ntBASIC0.32□□□□□ -2.36
Trim40Q3UWA4 Gm23988-201ENSMUST00000117034 122 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 Gm24717-201ENSMUST00000157522 124 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 Gm25974-201ENSMUST00000158701 94 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 Gm22239-201ENSMUST00000175220 103 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 Gm27943-201ENSMUST00000184844 116 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.31□□□□□ -2.36
Trim40Q3UWA4 Gm24263-201ENSMUST00000104059 107 ntBASIC0.3□□□□□ -2.36
Trim40Q3UWA4 Gm13065-201ENSMUST00000119178 141 ntBASIC0.3□□□□□ -2.36
Trim40Q3UWA4 Gm22451-201ENSMUST00000122803 151 ntBASIC0.3□□□□□ -2.36
Trim40Q3UWA4 Gm23672-201ENSMUST00000157471 107 ntBASIC0.3□□□□□ -2.36
Trim40Q3UWA4 Gm23260-201ENSMUST00000158317 172 ntBASIC0.3□□□□□ -2.36
Trim40Q3UWA4 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Trim40Q3UWA4 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.3□□□□□ -2.36
Trim40Q3UWA4 Gm24258-201ENSMUST00000083739 133 ntBASIC0.3□□□□□ -2.36
Trim40Q3UWA4 Gm25040-201ENSMUST00000103877 66 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm26152-201ENSMUST00000157427 101 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm25367-201ENSMUST00000158846 106 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm23340-201ENSMUST00000158955 123 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm27699-201ENSMUST00000183553 180 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Mir376b-201ENSMUST00000195930 82 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm44602-201ENSMUST00000205948 132 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm45492-201ENSMUST00000211611 288 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm25081-201ENSMUST00000082534 108 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Snora75-201ENSMUST00000082903 133 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Gm26202-201ENSMUST00000082910 65 ntBASIC0.29□□□□□ -2.36
Trim40Q3UWA4 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms