Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm25460-201ENSMUST00000157954 127 ntBASIC1.84□□□□□ -2.11
Shisa3Q3UPR0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.84□□□□□ -2.11
Shisa3Q3UPR0 Mir497-201ENSMUST00000200557 84 ntBASIC1.84□□□□□ -2.11
Shisa3Q3UPR0 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.84□□□□□ -2.11
Shisa3Q3UPR0 Gm22494-201ENSMUST00000104495 128 ntBASIC1.83□□□□□ -2.12
Shisa3Q3UPR0 Gm11694-201ENSMUST00000118637 159 ntBASIC1.83□□□□□ -2.12
Shisa3Q3UPR0 Gm22540-201ENSMUST00000158168 117 ntBASIC1.83□□□□□ -2.12
Shisa3Q3UPR0 Gm27399-201ENSMUST00000184250 78 ntBASIC1.83□□□□□ -2.12
Shisa3Q3UPR0 Gm27975-201ENSMUST00000184400 101 ntBASIC1.83□□□□□ -2.12
Shisa3Q3UPR0 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Mir7068-201ENSMUST00000183439 74 ntBASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Mir7217-201ENSMUST00000200304 62 ntBASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Gm45197-201ENSMUST00000205288 151 ntBASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Mir30d-201ENSMUST00000083503 82 ntBASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Mir34c-201ENSMUST00000083653 77 ntBASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Gm25650-201ENSMUST00000083784 162 ntBASIC1.82□□□□□ -2.12
Shisa3Q3UPR0 Gm44477-201ENSMUST00000199661 110 ntBASIC1.81□□□□□ -2.12
Shisa3Q3UPR0 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Shisa3Q3UPR0 Gm26342-201ENSMUST00000104557 129 ntBASIC1.8□□□□□ -2.12
Shisa3Q3UPR0 Gm6444-201ENSMUST00000119611 458 ntBASIC1.8□□□□□ -2.12
Shisa3Q3UPR0 Snora26-201ENSMUST00000175614 121 ntBASIC1.8□□□□□ -2.12
Shisa3Q3UPR0 Gm25644-201ENSMUST00000083209 107 ntBASIC1.8□□□□□ -2.12
Shisa3Q3UPR0 Gm23528-201ENSMUST00000104571 132 ntBASIC1.79□□□□□ -2.12
Shisa3Q3UPR0 Gm23881-201ENSMUST00000116872 66 ntBASIC1.79□□□□□ -2.12
Shisa3Q3UPR0 Gm12469-201ENSMUST00000117623 207 ntBASIC1.79□□□□□ -2.12
Shisa3Q3UPR0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.79□□□□□ -2.12
Shisa3Q3UPR0 Gm25642-201ENSMUST00000175137 66 ntBASIC1.79□□□□□ -2.12
Shisa3Q3UPR0 Gm22809-201ENSMUST00000082743 156 ntBASIC1.79□□□□□ -2.12
Shisa3Q3UPR0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Gm24984-201ENSMUST00000104454 133 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Gm15692-201ENSMUST00000152173 352 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Gm22732-201ENSMUST00000158093 121 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Gm25707-201ENSMUST00000175120 96 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Mir5118-201ENSMUST00000175551 67 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Gm44602-201ENSMUST00000205948 132 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Mir5117-201ENSMUST00000083226 84 ntBASIC1.78□□□□□ -2.12
Shisa3Q3UPR0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm23482-201ENSMUST00000104172 122 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm14923-201ENSMUST00000118270 155 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm26038-201ENSMUST00000158151 106 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm25901-201ENSMUST00000158494 130 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm23813-201ENSMUST00000175153 77 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm27415-201ENSMUST00000183720 95 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm27987-201ENSMUST00000184023 93 ntBASIC1.77□□□□□ -2.13
Shisa3Q3UPR0 Gm23551-201ENSMUST00000116852 121 ntBASIC1.76□□□□□ -2.13
Shisa3Q3UPR0 Gm24384-201ENSMUST00000122693 75 ntBASIC1.76□□□□□ -2.13
Shisa3Q3UPR0 Gm22803-201ENSMUST00000158049 283 ntBASIC1.76□□□□□ -2.13
Shisa3Q3UPR0 Gm22159-201ENSMUST00000158412 130 ntBASIC1.76□□□□□ -2.13
Shisa3Q3UPR0 Gm23342-201ENSMUST00000158958 115 ntBASIC1.76□□□□□ -2.13
Shisa3Q3UPR0 Gm24674-201ENSMUST00000179194 104 ntBASIC1.76□□□□□ -2.13
Shisa3Q3UPR0 Gm27544-201ENSMUST00000185069 155 ntBASIC1.76□□□□□ -2.13
Shisa3Q3UPR0 Mir344e-201ENSMUST00000104677 66 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Gm24183-201ENSMUST00000122572 93 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Mir7014-201ENSMUST00000183853 63 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Gm44469-201ENSMUST00000198558 79 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Gm44948-201ENSMUST00000209050 149 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Gm22458-201ENSMUST00000082576 107 ntBASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Shisa3Q3UPR0 Gm23715-201ENSMUST00000157354 106 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 Gm25663-201ENSMUST00000157698 135 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 Gm24770-201ENSMUST00000158505 92 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 Gm24129-201ENSMUST00000158537 97 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 Gm27959-201ENSMUST00000185172 111 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 Mir378a-201ENSMUST00000198300 66 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.74□□□□□ -2.13
Shisa3Q3UPR0 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm22544-201ENSMUST00000104349 127 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm15536-201ENSMUST00000121411 114 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm26478-201ENSMUST00000122611 133 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm24686-201ENSMUST00000157755 93 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm24547-201ENSMUST00000158649 149 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm22666-201ENSMUST00000158717 164 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm22801-201ENSMUST00000175624 84 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Mir7016-201ENSMUST00000184308 72 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm26202-201ENSMUST00000082910 65 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm25402-201ENSMUST00000082966 131 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Gm24494-201ENSMUST00000083804 81 ntBASIC1.73□□□□□ -2.13
Shisa3Q3UPR0 Mir709-201ENSMUST00000102190 88 ntBASIC1.72□□□□□ -2.13
Shisa3Q3UPR0 Gm25542-201ENSMUST00000116889 94 ntBASIC1.72□□□□□ -2.13
Shisa3Q3UPR0 Gm22664-201ENSMUST00000158719 105 ntBASIC1.72□□□□□ -2.13
Shisa3Q3UPR0 Mir468-201ENSMUST00000197332 78 ntBASIC1.72□□□□□ -2.13
Shisa3Q3UPR0 Gm23056-201ENSMUST00000082803 111 ntBASIC1.72□□□□□ -2.13
Shisa3Q3UPR0 Gm25094-201ENSMUST00000103992 131 ntBASIC1.71□□□□□ -2.14
Shisa3Q3UPR0 Gm24648-201ENSMUST00000157111 132 ntBASIC1.71□□□□□ -2.14
Shisa3Q3UPR0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.71□□□□□ -2.14
Shisa3Q3UPR0 Gm10548-202ENSMUST00000165672 272 ntBASIC1.71□□□□□ -2.14
Shisa3Q3UPR0 Gm25740-201ENSMUST00000180247 107 ntBASIC1.71□□□□□ -2.14
Shisa3Q3UPR0 Gm25854-201ENSMUST00000082792 72 ntBASIC1.71□□□□□ -2.14
Shisa3Q3UPR0 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
Shisa3Q3UPR0 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Shisa3Q3UPR0 Gm23469-201ENSMUST00000157131 104 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 276.4 ms