Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Gm27803-201ENSMUST00000183763 119 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Gm23445-201ENSMUST00000082800 107 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Mir377-201ENSMUST00000083504 68 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Gm22469-201ENSMUST00000104118 133 ntBASIC0.27□□□□□ -2.37
Ctdnep1Q3TP92 Gm14626-201ENSMUST00000117619 216 ntBASIC0.27□□□□□ -2.37
Ctdnep1Q3TP92 Gm22337-201ENSMUST00000157721 132 ntBASIC0.27□□□□□ -2.37
Ctdnep1Q3TP92 Gm27993-201ENSMUST00000184362 85 ntBASIC0.27□□□□□ -2.37
Ctdnep1Q3TP92 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.27□□□□□ -2.37
Ctdnep1Q3TP92 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.27□□□□□ -2.37
Ctdnep1Q3TP92 Gm22169-201ENSMUST00000083229 107 ntBASIC0.27□□□□□ -2.37
Ctdnep1Q3TP92 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Snord70-201ENSMUST00000104157 87 ntBASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Gm22606-201ENSMUST00000158290 103 ntBASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Mir7010-201ENSMUST00000183464 63 ntBASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Trbv25-201ENSMUST00000194700 273 ntBASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Gm45541-201ENSMUST00000210443 54 ntBASIC0.26□□□□□ -2.37
Ctdnep1Q3TP92 Mir20b-201ENSMUST00000102087 80 ntBASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Gm11644-201ENSMUST00000119735 150 ntBASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Gm22139-201ENSMUST00000158747 105 ntBASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Mir6342-201ENSMUST00000183870 125 ntBASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Gm37330-201ENSMUST00000192606 153 ntBASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Gm44469-201ENSMUST00000198558 79 ntBASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Gm25894-201ENSMUST00000083458 75 ntBASIC0.25□□□□□ -2.37
Ctdnep1Q3TP92 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Gm22105-201ENSMUST00000116734 116 ntBASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Mir1191-201ENSMUST00000116883 120 ntBASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Gm22699-201ENSMUST00000175376 105 ntBASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Gm42935-201ENSMUST00000202004 151 ntBASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Gm23301-201ENSMUST00000082713 65 ntBASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Ctdnep1Q3TP92 Gm22195-201ENSMUST00000116861 108 ntBASIC0.23□□□□□ -2.37
Ctdnep1Q3TP92 Gm12469-201ENSMUST00000117623 207 ntBASIC0.23□□□□□ -2.37
Ctdnep1Q3TP92 Gm25060-201ENSMUST00000157374 130 ntBASIC0.23□□□□□ -2.37
Ctdnep1Q3TP92 Gm22983-201ENSMUST00000158308 104 ntBASIC0.23□□□□□ -2.37
Ctdnep1Q3TP92 Gm22239-201ENSMUST00000175220 103 ntBASIC0.23□□□□□ -2.37
Ctdnep1Q3TP92 Gm44457-201ENSMUST00000198109 76 ntBASIC0.23□□□□□ -2.37
Ctdnep1Q3TP92 Gm44455-201ENSMUST00000200061 82 ntBASIC0.23□□□□□ -2.37
Ctdnep1Q3TP92 Gm22373-201ENSMUST00000104584 89 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Gm23990-201ENSMUST00000117031 117 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Gm25599-201ENSMUST00000157816 103 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Gm27475-201ENSMUST00000183420 61 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Mir7065-201ENSMUST00000185110 61 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Mir7229-201ENSMUST00000197062 53 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Snord47-201ENSMUST00000083034 77 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Gm25410-201ENSMUST00000083758 137 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Gm23947-201ENSMUST00000093636 107 ntBASIC0.22□□□□□ -2.37
Ctdnep1Q3TP92 Gm23060-201ENSMUST00000102345 109 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm22030-201ENSMUST00000116942 63 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm23253-201ENSMUST00000157441 104 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm25716-201ENSMUST00000158628 104 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm25693-201ENSMUST00000175443 85 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm29535-201ENSMUST00000185723 109 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm28143-201ENSMUST00000191082 109 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm26225-201ENSMUST00000082508 135 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm23509-201ENSMUST00000083080 160 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Mir224-201ENSMUST00000083608 82 ntBASIC0.21□□□□□ -2.38
Ctdnep1Q3TP92 Gm24290-201ENSMUST00000157634 96 ntBASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm24223-201ENSMUST00000158827 90 ntBASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm23337-201ENSMUST00000158959 118 ntBASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm25633-201ENSMUST00000178565 107 ntBASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm25797-201ENSMUST00000082640 107 ntBASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.2□□□□□ -2.38
Ctdnep1Q3TP92 Mir710-201ENSMUST00000102088 110 ntBASIC0.19□□□□□ -2.38
Ctdnep1Q3TP92 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Ctdnep1Q3TP92 Gm25600-201ENSMUST00000158357 106 ntBASIC0.19□□□□□ -2.38
Ctdnep1Q3TP92 Gm26290-201ENSMUST00000158891 145 ntBASIC0.19□□□□□ -2.38
Ctdnep1Q3TP92 Gm24321-201ENSMUST00000175348 80 ntBASIC0.19□□□□□ -2.38
Ctdnep1Q3TP92 Mir1949-202ENSMUST00000199259 70 ntBASIC0.19□□□□□ -2.38
Ctdnep1Q3TP92 Mir1197-201ENSMUST00000117037 120 ntBASIC0.18□□□□□ -2.38
Ctdnep1Q3TP92 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.18□□□□□ -2.38
Ctdnep1Q3TP92 Mir1966-201ENSMUST00000158807 108 ntBASIC0.18□□□□□ -2.38
Ctdnep1Q3TP92 Gm18502-201ENSMUST00000218679 199 ntBASIC0.18□□□□□ -2.38
Ctdnep1Q3TP92 Gm24461-201ENSMUST00000082735 103 ntBASIC0.18□□□□□ -2.38
Ctdnep1Q3TP92 Mir200a-201ENSMUST00000083466 90 ntBASIC0.18□□□□□ -2.38
Ctdnep1Q3TP92 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.18□□□□□ -2.38
Ctdnep1Q3TP92 Snord90-201ENSMUST00000104568 111 ntBASIC0.17□□□□□ -2.38
Ctdnep1Q3TP92 Gm23783-201ENSMUST00000157941 102 ntBASIC0.17□□□□□ -2.38
Ctdnep1Q3TP92 Gm22541-201ENSMUST00000158165 127 ntBASIC0.17□□□□□ -2.38
Ctdnep1Q3TP92 Gm24129-201ENSMUST00000158537 97 ntBASIC0.17□□□□□ -2.38
Ctdnep1Q3TP92 Mir3105-201ENSMUST00000175480 85 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms