Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm27521-201ENSMUST00000184022 64 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Snora62-201ENSMUST00000082991 149 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.43□□□□□ -2.48
Shox2P70390 Gm22032-201ENSMUST00000116946 116 ntBASIC-0.44□□□□□ -2.48
Shox2P70390 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.44□□□□□ -2.48
Shox2P70390 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.44□□□□□ -2.48
Shox2P70390 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.44□□□□□ -2.48
Shox2P70390 Mir327-201ENSMUST00000199328 69 ntBASIC-0.44□□□□□ -2.48
Shox2P70390 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.44□□□□□ -2.48
Shox2P70390 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.44□□□□□ -2.48
Shox2P70390 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.45□□□□□ -2.48
Shox2P70390 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.45□□□□□ -2.48
Shox2P70390 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.45□□□□□ -2.48
Shox2P70390 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.45□□□□□ -2.48
Shox2P70390 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.45□□□□□ -2.48
Shox2P70390 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.45□□□□□ -2.48
Shox2P70390 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
Shox2P70390 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.46□□□□□ -2.48
Shox2P70390 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.46□□□□□ -2.48
Shox2P70390 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.46□□□□□ -2.48
Shox2P70390 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
Shox2P70390 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
Shox2P70390 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.47□□□□□ -2.48
Shox2P70390 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.47□□□□□ -2.48
Shox2P70390 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.47□□□□□ -2.48
Shox2P70390 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.47□□□□□ -2.48
Shox2P70390 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.47□□□□□ -2.48
Shox2P70390 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.47□□□□□ -2.48
Shox2P70390 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.47□□□□□ -2.48
Shox2P70390 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.48□□□□□ -2.49
Shox2P70390 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.48□□□□□ -2.49
Shox2P70390 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.48□□□□□ -2.49
Shox2P70390 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.48□□□□□ -2.49
Shox2P70390 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.48□□□□□ -2.49
Shox2P70390 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.48□□□□□ -2.49
Shox2P70390 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.49□□□□□ -2.49
Shox2P70390 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.5□□□□□ -2.49
Shox2P70390 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.5□□□□□ -2.49
Shox2P70390 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.5□□□□□ -2.49
Shox2P70390 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.5□□□□□ -2.49
Shox2P70390 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.5□□□□□ -2.49
Shox2P70390 Gm23406-201ENSMUST00000082537 122 ntBASIC-0.5□□□□□ -2.49
Shox2P70390 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.51□□□□□ -2.49
Shox2P70390 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.51□□□□□ -2.49
Shox2P70390 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.51□□□□□ -2.49
Shox2P70390 Gm26194-201ENSMUST00000175036 71 ntBASIC-0.51□□□□□ -2.49
Shox2P70390 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.51□□□□□ -2.49
Shox2P70390 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.51□□□□□ -2.49
Shox2P70390 Mir489-201ENSMUST00000093599 107 ntBASIC-0.51□□□□□ -2.49
Shox2P70390 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.52□□□□□ -2.49
Shox2P70390 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.52□□□□□ -2.49
Shox2P70390 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.52□□□□□ -2.49
Shox2P70390 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.52□□□□□ -2.49
Shox2P70390 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.52□□□□□ -2.49
Shox2P70390 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.53□□□□□ -2.49
Shox2P70390 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.53□□□□□ -2.49
Shox2P70390 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.53□□□□□ -2.49
Shox2P70390 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.53□□□□□ -2.49
Shox2P70390 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.53□□□□□ -2.49
Shox2P70390 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.53□□□□□ -2.49
Shox2P70390 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.53□□□□□ -2.49
Shox2P70390 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.54□□□□□ -2.5
Shox2P70390 AC192333.1-201ENSMUST00000224573 376 ntBASIC-0.54□□□□□ -2.5
Shox2P70390 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Gm23186-201ENSMUST00000180078 107 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Mir186-201ENSMUST00000083497 71 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Mir363-201ENSMUST00000093598 75 ntBASIC-0.55□□□□□ -2.5
Shox2P70390 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.56□□□□□ -2.5
Shox2P70390 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.56□□□□□ -2.5
Shox2P70390 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.56□□□□□ -2.5
Shox2P70390 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.56□□□□□ -2.5
Shox2P70390 Mir96-201ENSMUST00000083652 106 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 132.3 ms