Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24676-201ENSMUST00000158758 75 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm24221-201ENSMUST00000158833 313 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm22775-201ENSMUST00000177630 120 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm23569-201ENSMUST00000180120 120 ntBASIC0.97□□□□□ -2.25
NcanP55066 Mir411-201ENSMUST00000083543 82 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm24449-201ENSMUST00000083985 106 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm10351-201ENSMUST00000087694 125 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
NcanP55066 Mir669j-201ENSMUST00000179023 121 ntBASIC0.96□□□□□ -2.26
NcanP55066 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.96□□□□□ -2.26
NcanP55066 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.96□□□□□ -2.26
NcanP55066 Gm26454-201ENSMUST00000082682 107 ntBASIC0.96□□□□□ -2.26
NcanP55066 Mir324-201ENSMUST00000083600 89 ntBASIC0.96□□□□□ -2.26
NcanP55066 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
NcanP55066 Gm26011-201ENSMUST00000104410 104 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm22999-201ENSMUST00000157082 88 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm22966-201ENSMUST00000157957 129 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm23260-201ENSMUST00000158317 172 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm23375-201ENSMUST00000175407 83 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm23966-201ENSMUST00000179823 107 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm20118-201ENSMUST00000187207 162 ntBASIC0.95□□□□□ -2.26
NcanP55066 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.95□□□□□ -2.26
NcanP55066 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm25851-201ENSMUST00000082794 107 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm22681-201ENSMUST00000083853 106 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm25611-201ENSMUST00000104017 133 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm14946-201ENSMUST00000119859 296 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm26091-201ENSMUST00000122704 82 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm25241-201ENSMUST00000174909 84 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm26217-201ENSMUST00000175212 84 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm27851-201ENSMUST00000183529 63 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm43898-201ENSMUST00000204456 424 ntBASIC0.94□□□□□ -2.26
NcanP55066 Snora41-201ENSMUST00000082668 132 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm23509-201ENSMUST00000083080 160 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm22757-201ENSMUST00000102279 96 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm23130-201ENSMUST00000104252 74 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm23036-201ENSMUST00000157885 99 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm22515-201ENSMUST00000158273 305 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm23763-201ENSMUST00000158345 60 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm16307-201ENSMUST00000161269 210 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm20409-201ENSMUST00000173457 130 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm24167-201ENSMUST00000177733 124 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm24028-201ENSMUST00000178991 124 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm45688-201ENSMUST00000210002 101 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm22809-201ENSMUST00000082743 156 ntBASIC0.93□□□□□ -2.26
NcanP55066 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NcanP55066 Gm24271-201ENSMUST00000102327 111 ntBASIC0.92□□□□□ -2.26
NcanP55066 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
NcanP55066 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
NcanP55066 Gm23253-201ENSMUST00000157441 104 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm26084-201ENSMUST00000157903 104 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm22384-201ENSMUST00000158187 104 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm22425-201ENSMUST00000158532 138 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm27446-201ENSMUST00000183963 89 ntBASIC0.92□□□□□ -2.26
NcanP55066 Mir468-201ENSMUST00000197332 78 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm42795-201ENSMUST00000198847 76 ntBASIC0.92□□□□□ -2.26
NcanP55066 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm26123-201ENSMUST00000083363 135 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm24258-201ENSMUST00000083739 133 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm24401-201ENSMUST00000157868 91 ntBASIC0.91□□□□□ -2.26
NcanP55066 Mir1961-201ENSMUST00000158643 112 ntBASIC0.91□□□□□ -2.26
NcanP55066 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.91□□□□□ -2.26
NcanP55066 Mir3094-201ENSMUST00000175121 64 ntBASIC0.91□□□□□ -2.26
NcanP55066 Gm44948-201ENSMUST00000209050 149 ntBASIC0.91□□□□□ -2.26
NcanP55066 Gm25683-201ENSMUST00000083940 131 ntBASIC0.91□□□□□ -2.26
NcanP55066 Gm14626-201ENSMUST00000117619 216 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm16186-201ENSMUST00000120132 216 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm22815-201ENSMUST00000157451 62 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm24238-201ENSMUST00000157792 98 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm24020-201ENSMUST00000180156 108 ntBASIC0.9□□□□□ -2.27
NcanP55066 Mir7077-201ENSMUST00000183991 57 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm38274-201ENSMUST00000195689 148 ntBASIC0.9□□□□□ -2.27
NcanP55066 Mir6896-201ENSMUST00000198033 73 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm24311-201ENSMUST00000082570 104 ntBASIC0.9□□□□□ -2.27
NcanP55066 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.9□□□□□ -2.27
NcanP55066 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
NcanP55066 Gm25920-201ENSMUST00000158307 99 ntBASIC0.89□□□□□ -2.27
NcanP55066 Mir6377-201ENSMUST00000183760 114 ntBASIC0.89□□□□□ -2.27
NcanP55066 Gm44385-201ENSMUST00000198781 81 ntBASIC0.89□□□□□ -2.27
NcanP55066 Gm25812-201ENSMUST00000082751 103 ntBASIC0.89□□□□□ -2.27
NcanP55066 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm22544-201ENSMUST00000104349 127 ntBASIC0.88□□□□□ -2.27
NcanP55066 Gm22489-201ENSMUST00000116813 62 ntBASIC0.88□□□□□ -2.27
NcanP55066 Gm24718-201ENSMUST00000157521 136 ntBASIC0.88□□□□□ -2.27
NcanP55066 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Mir709-201ENSMUST00000102190 88 ntBASIC0.87□□□□□ -2.27
NcanP55066 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NcanP55066 Gm24246-201ENSMUST00000157315 132 ntBASIC0.87□□□□□ -2.27
NcanP55066 Gm44807-201ENSMUST00000206115 154 ntBASIC0.87□□□□□ -2.27
NcanP55066 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 183.1 ms