Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22944-201ENSMUST00000158662 133 ntBASIC1.92□□□□□ -2.1
Rfx1P48377 Gm27420-201ENSMUST00000183823 79 ntBASIC1.92□□□□□ -2.1
Rfx1P48377 Gm45754-201ENSMUST00000212380 279 ntBASIC1.92□□□□□ -2.1
Rfx1P48377 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Rfx1P48377 Gm23351-201ENSMUST00000158427 125 ntBASIC1.91□□□□□ -2.1
Rfx1P48377 Mir7241-201ENSMUST00000184532 64 ntBASIC1.91□□□□□ -2.1
Rfx1P48377 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.91□□□□□ -2.1
Rfx1P48377 Gm44408-201ENSMUST00000200205 66 ntBASIC1.91□□□□□ -2.1
Rfx1P48377 Mir410-201ENSMUST00000083563 81 ntBASIC1.91□□□□□ -2.1
Rfx1P48377 Mir709-201ENSMUST00000102190 88 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Gm25759-201ENSMUST00000103988 129 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Gm22603-201ENSMUST00000157603 96 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Gm26181-201ENSMUST00000157687 106 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Gm23114-201ENSMUST00000158478 117 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Mir1961-201ENSMUST00000158643 112 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Gm28383-201ENSMUST00000187563 139 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Gm24406-201ENSMUST00000083026 128 ntBASIC1.9□□□□□ -2.11
Rfx1P48377 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Rfx1P48377 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
Rfx1P48377 Mir802-201ENSMUST00000103258 97 ntBASIC1.89□□□□□ -2.11
Rfx1P48377 Mir3096-201ENSMUST00000116685 71 ntBASIC1.89□□□□□ -2.11
Rfx1P48377 Gm24638-201ENSMUST00000179807 132 ntBASIC1.89□□□□□ -2.11
Rfx1P48377 Mir7679-201ENSMUST00000183379 63 ntBASIC1.89□□□□□ -2.11
Rfx1P48377 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.89□□□□□ -2.11
Rfx1P48377 Gm24524-201ENSMUST00000082925 170 ntBASIC1.89□□□□□ -2.11
Rfx1P48377 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Rfx1P48377 Gm15115-201ENSMUST00000121145 264 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Mir1899-201ENSMUST00000122798 96 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Gm24547-201ENSMUST00000158649 149 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Traj60-201ENSMUST00000167781 54 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Gm23714-201ENSMUST00000179259 105 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.88□□□□□ -2.11
Rfx1P48377 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Gm43977-201ENSMUST00000203970 189 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Mir324-201ENSMUST00000083600 89 ntBASIC1.88□□□□□ -2.11
Rfx1P48377 Gm22963-201ENSMUST00000157960 91 ntBASIC1.87□□□□□ -2.11
Rfx1P48377 Gm44396-201ENSMUST00000199843 114 ntBASIC1.87□□□□□ -2.11
Rfx1P48377 Gm24165-201ENSMUST00000082718 128 ntBASIC1.87□□□□□ -2.11
Rfx1P48377 Snord60-201ENSMUST00000082834 78 ntBASIC1.87□□□□□ -2.11
Rfx1P48377 Gm23244-201ENSMUST00000083375 92 ntBASIC1.87□□□□□ -2.11
Rfx1P48377 Gm22723-201ENSMUST00000083820 129 ntBASIC1.87□□□□□ -2.11
Rfx1P48377 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Rfx1P48377 Gm22556-201ENSMUST00000157803 100 ntBASIC1.86□□□□□ -2.11
Rfx1P48377 Gm24808-201ENSMUST00000157993 118 ntBASIC1.86□□□□□ -2.11
Rfx1P48377 Gm24223-201ENSMUST00000158827 90 ntBASIC1.86□□□□□ -2.11
Rfx1P48377 Gm22801-201ENSMUST00000175624 84 ntBASIC1.86□□□□□ -2.11
Rfx1P48377 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.86□□□□□ -2.11
Rfx1P48377 Gm25370-201ENSMUST00000158159 94 ntBASIC1.85□□□□□ -2.11
Rfx1P48377 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.85□□□□□ -2.11
Rfx1P48377 Gm16399-201ENSMUST00000181423 219 ntBASIC1.85□□□□□ -2.11
Rfx1P48377 Snord80-201ENSMUST00000083801 81 ntBASIC1.85□□□□□ -2.11
Rfx1P48377 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
Rfx1P48377 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Rfx1P48377 Gm24271-201ENSMUST00000102327 111 ntBASIC1.84□□□□□ -2.11
Rfx1P48377 Gm25976-201ENSMUST00000158695 130 ntBASIC1.84□□□□□ -2.11
Rfx1P48377 Gm23339-201ENSMUST00000158962 139 ntBASIC1.84□□□□□ -2.11
Rfx1P48377 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.84□□□□□ -2.11
Rfx1P48377 Gm26224-201ENSMUST00000082506 80 ntBASIC1.84□□□□□ -2.11
Rfx1P48377 Gm26922-201ENSMUST00000082687 72 ntBASIC1.84□□□□□ -2.11
Rfx1P48377 Mir1191-201ENSMUST00000116883 120 ntBASIC1.83□□□□□ -2.12
Rfx1P48377 Gm26290-201ENSMUST00000158891 145 ntBASIC1.83□□□□□ -2.12
Rfx1P48377 Gm25832-201ENSMUST00000104140 130 ntBASIC1.82□□□□□ -2.12
Rfx1P48377 Gm23881-201ENSMUST00000116872 66 ntBASIC1.82□□□□□ -2.12
Rfx1P48377 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.82□□□□□ -2.12
Rfx1P48377 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.82□□□□□ -2.12
Rfx1P48377 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.82□□□□□ -2.12
Rfx1P48377 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.82□□□□□ -2.12
Rfx1P48377 Mir450b-201ENSMUST00000102095 82 ntBASIC1.81□□□□□ -2.12
Rfx1P48377 Gm24895-201ENSMUST00000122742 74 ntBASIC1.81□□□□□ -2.12
Rfx1P48377 Gm24076-201ENSMUST00000158179 94 ntBASIC1.81□□□□□ -2.12
Rfx1P48377 Gm24222-201ENSMUST00000158834 93 ntBASIC1.81□□□□□ -2.12
Rfx1P48377 Mir6352-201ENSMUST00000184495 116 ntBASIC1.81□□□□□ -2.12
Rfx1P48377 Gm44962-201ENSMUST00000206460 279 ntBASIC1.81□□□□□ -2.12
Rfx1P48377 Gm26369-201ENSMUST00000157825 100 ntBASIC1.8□□□□□ -2.12
Rfx1P48377 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.8□□□□□ -2.12
Rfx1P48377 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Rfx1P48377 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.8□□□□□ -2.12
Rfx1P48377 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Rfx1P48377 Gm23130-201ENSMUST00000104252 74 ntBASIC1.79□□□□□ -2.12
Rfx1P48377 Gm24476-201ENSMUST00000157437 131 ntBASIC1.79□□□□□ -2.12
Rfx1P48377 Gm22503-201ENSMUST00000158983 115 ntBASIC1.79□□□□□ -2.12
Rfx1P48377 Gm18433-201ENSMUST00000192747 197 ntBASIC1.79□□□□□ -2.12
Rfx1P48377 Mir764-201ENSMUST00000103259 108 ntBASIC1.78□□□□□ -2.12
Rfx1P48377 Gm26274-201ENSMUST00000157103 321 ntBASIC1.78□□□□□ -2.12
Rfx1P48377 Gm22845-201ENSMUST00000157712 104 ntBASIC1.78□□□□□ -2.12
Rfx1P48377 Gm25901-201ENSMUST00000158494 130 ntBASIC1.78□□□□□ -2.12
Rfx1P48377 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.78□□□□□ -2.12
Rfx1P48377 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Rfx1P48377 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.77□□□□□ -2.13
Rfx1P48377 Mir301b-201ENSMUST00000102333 97 ntBASIC1.77□□□□□ -2.13
Rfx1P48377 Gm14882-201ENSMUST00000117216 218 ntBASIC1.77□□□□□ -2.13
Rfx1P48377 Gm23558-201ENSMUST00000157823 80 ntBASIC1.77□□□□□ -2.13
Rfx1P48377 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.76□□□□□ -2.13
Rfx1P48377 Gm22706-201ENSMUST00000157907 112 ntBASIC1.76□□□□□ -2.13
Rfx1P48377 Gm25128-201ENSMUST00000083339 76 ntBASIC1.76□□□□□ -2.13
Rfx1P48377 Gm25629-201ENSMUST00000084001 107 ntBASIC1.76□□□□□ -2.13
Rfx1P48377 Gm22761-201ENSMUST00000102278 96 ntBASIC1.75□□□□□ -2.13
Rfx1P48377 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 187.6 ms