Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22169-201ENSMUST00000083229 107 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Mir471-201ENSMUST00000093596 67 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Traf1P39428 Gm23320-201ENSMUST00000104462 127 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm25565-201ENSMUST00000104605 105 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm27934-201ENSMUST00000158795 63 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm20409-201ENSMUST00000173457 130 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm22239-201ENSMUST00000175220 103 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm23864-201ENSMUST00000177607 107 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Mir7077-201ENSMUST00000183991 57 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm18665-201ENSMUST00000189783 270 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Mir3969-201ENSMUST00000197106 92 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm44853-201ENSMUST00000209070 250 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm3702-201ENSMUST00000211754 346 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Snord61-201ENSMUST00000083176 71 ntBASIC0.32□□□□□ -2.36
Traf1P39428 Gm25980-201ENSMUST00000157176 218 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Gm25329-201ENSMUST00000158041 126 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Gm22520-201ENSMUST00000158269 129 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Gm23917-201ENSMUST00000175256 98 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Gm22699-201ENSMUST00000175376 105 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Gm44457-201ENSMUST00000198109 76 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Gm44338-201ENSMUST00000198614 110 ntBASIC0.31□□□□□ -2.36
Traf1P39428 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.31□□□□□ -2.36
Traf1P39428 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.31□□□□□ -2.36
Traf1P39428 Gm25610-201ENSMUST00000104016 129 ntBASIC0.3□□□□□ -2.36
Traf1P39428 Gm25060-201ENSMUST00000157374 130 ntBASIC0.3□□□□□ -2.36
Traf1P39428 Gm22967-201ENSMUST00000157956 239 ntBASIC0.3□□□□□ -2.36
Traf1P39428 Gm23857-201ENSMUST00000158379 111 ntBASIC0.3□□□□□ -2.36
Traf1P39428 Gm26097-201ENSMUST00000179642 93 ntBASIC0.3□□□□□ -2.36
Traf1P39428 Gm24208-201ENSMUST00000082783 135 ntBASIC0.3□□□□□ -2.36
Traf1P39428 Snord60-201ENSMUST00000082834 78 ntBASIC0.3□□□□□ -2.36
Traf1P39428 Gm22195-201ENSMUST00000116861 108 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Gm11644-201ENSMUST00000119735 150 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Gm22989-201ENSMUST00000158313 86 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Gm22139-201ENSMUST00000158747 105 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Mir6342-201ENSMUST00000183870 125 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Mir7657-201ENSMUST00000196051 57 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Mir7229-201ENSMUST00000197062 53 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.29□□□□□ -2.36
Traf1P39428 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.29□□□□□ -2.36
Traf1P39428 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
Traf1P39428 Mir377-201ENSMUST00000083504 68 ntBASIC0.29□□□□□ -2.36
Traf1P39428 Gm22340-201ENSMUST00000157717 114 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Gm22606-201ENSMUST00000158290 103 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Gm25161-201ENSMUST00000158913 132 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Gm10548-202ENSMUST00000165672 272 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Traf1P39428 Gm27803-201ENSMUST00000183763 119 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Gm27446-201ENSMUST00000183963 89 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Gm44455-201ENSMUST00000200061 82 ntBASIC0.28□□□□□ -2.36
Traf1P39428 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Gm25894-201ENSMUST00000083458 75 ntBASIC0.28□□□□□ -2.36
Traf1P39428 Snord70-201ENSMUST00000104157 87 ntBASIC0.27□□□□□ -2.37
Traf1P39428 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.27□□□□□ -2.37
Traf1P39428 Gm24238-201ENSMUST00000157792 98 ntBASIC0.27□□□□□ -2.37
Traf1P39428 Gm25375-201ENSMUST00000158157 135 ntBASIC0.27□□□□□ -2.37
Traf1P39428 Gm26158-201ENSMUST00000158973 119 ntBASIC0.27□□□□□ -2.37
Traf1P39428 Trbv25-201ENSMUST00000194700 273 ntBASIC0.27□□□□□ -2.37
Traf1P39428 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Traf1P39428 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.27□□□□□ -2.37
Traf1P39428 Gm25410-201ENSMUST00000083758 137 ntBASIC0.27□□□□□ -2.37
Traf1P39428 Gm22105-201ENSMUST00000116734 116 ntBASIC0.26□□□□□ -2.37
Traf1P39428 Gm24833-201ENSMUST00000116775 120 ntBASIC0.26□□□□□ -2.37
Traf1P39428 Mir1191-201ENSMUST00000116883 120 ntBASIC0.26□□□□□ -2.37
Traf1P39428 Gm23990-201ENSMUST00000117031 117 ntBASIC0.26□□□□□ -2.37
Traf1P39428 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.26□□□□□ -2.37
Traf1P39428 Gm27980-201ENSMUST00000184094 169 ntBASIC0.26□□□□□ -2.37
Traf1P39428 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.26□□□□□ -2.37
Traf1P39428 Gm23947-201ENSMUST00000093636 107 ntBASIC0.26□□□□□ -2.37
Traf1P39428 Gm24232-201ENSMUST00000104314 132 ntBASIC0.25□□□□□ -2.37
Traf1P39428 Gm22373-201ENSMUST00000104584 89 ntBASIC0.25□□□□□ -2.37
Traf1P39428 Gm23253-201ENSMUST00000157441 104 ntBASIC0.25□□□□□ -2.37
Traf1P39428 Scarna8-201ENSMUST00000158333 131 ntBASIC0.25□□□□□ -2.37
Traf1P39428 Gm25247-201ENSMUST00000175475 90 ntBASIC0.25□□□□□ -2.37
Traf1P39428 Gm27717-201ENSMUST00000183933 151 ntBASIC0.25□□□□□ -2.37
Traf1P39428 Mir467g-201ENSMUST00000116906 120 ntBASIC0.24□□□□□ -2.37
Traf1P39428 Gm14626-201ENSMUST00000117619 216 ntBASIC0.24□□□□□ -2.37
Traf1P39428 Gm24288-201ENSMUST00000157630 144 ntBASIC0.24□□□□□ -2.37
Traf1P39428 Gm25599-201ENSMUST00000157816 103 ntBASIC0.24□□□□□ -2.37
Traf1P39428 Gm26290-201ENSMUST00000158891 145 ntBASIC0.24□□□□□ -2.37
Traf1P39428 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Traf1P39428 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.24□□□□□ -2.37
Traf1P39428 Gm26225-201ENSMUST00000082508 135 ntBASIC0.24□□□□□ -2.37
Traf1P39428 Gm23509-201ENSMUST00000083080 160 ntBASIC0.24□□□□□ -2.37
Traf1P39428 Gm12469-201ENSMUST00000117623 207 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm25716-201ENSMUST00000158628 104 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm25693-201ENSMUST00000175443 85 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm27943-201ENSMUST00000184844 116 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm43381-201ENSMUST00000198553 165 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm44469-201ENSMUST00000198558 79 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm42935-201ENSMUST00000202004 151 ntBASIC0.23□□□□□ -2.37
Traf1P39428 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Snord47-201ENSMUST00000083034 77 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm24445-201ENSMUST00000083981 107 ntBASIC0.23□□□□□ -2.37
Traf1P39428 Gm24290-201ENSMUST00000157634 96 ntBASIC0.22□□□□□ -2.37
Traf1P39428 Mir3108-201ENSMUST00000175500 79 ntBASIC0.22□□□□□ -2.37
Traf1P39428 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Traf1P39428 Gm25797-201ENSMUST00000082640 107 ntBASIC0.22□□□□□ -2.37
Traf1P39428 Mir20b-201ENSMUST00000102087 80 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 212.5 ms