Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23763-201ENSMUST00000158345 60 ntBASIC2.15□□□□□ -2.07
RaraP11416 Gm23813-201ENSMUST00000175153 77 ntBASIC2.15□□□□□ -2.07
RaraP11416 Mir6997-201ENSMUST00000184313 71 ntBASIC2.15□□□□□ -2.07
RaraP11416 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
RaraP11416 Gm25068-201ENSMUST00000103895 110 ntBASIC2.14□□□□□ -2.07
RaraP11416 Scarna9-201ENSMUST00000104318 70 ntBASIC2.14□□□□□ -2.07
RaraP11416 Gm22677-201ENSMUST00000116977 108 ntBASIC2.14□□□□□ -2.07
RaraP11416 Mir3061-201ENSMUST00000175129 91 ntBASIC2.14□□□□□ -2.07
RaraP11416 Gm25229-201ENSMUST00000178587 79 ntBASIC2.14□□□□□ -2.07
RaraP11416 Mir200b-201ENSMUST00000083615 70 ntBASIC2.14□□□□□ -2.07
RaraP11416 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RaraP11416 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
RaraP11416 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RaraP11416 Gm24223-201ENSMUST00000158827 90 ntBASIC2.13□□□□□ -2.07
RaraP11416 Gm27722-201ENSMUST00000183908 76 ntBASIC2.13□□□□□ -2.07
RaraP11416 Gm27443-201ENSMUST00000184660 98 ntBASIC2.13□□□□□ -2.07
RaraP11416 Mir3087-201ENSMUST00000199405 56 ntBASIC2.13□□□□□ -2.07
RaraP11416 Gm43865-201ENSMUST00000204721 127 ntBASIC2.13□□□□□ -2.07
RaraP11416 Gm24805-201ENSMUST00000082931 104 ntBASIC2.13□□□□□ -2.07
RaraP11416 Gm24044-201ENSMUST00000083107 156 ntBASIC2.13□□□□□ -2.07
RaraP11416 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RaraP11416 Gm23950-201ENSMUST00000104026 129 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm24984-201ENSMUST00000104454 133 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm24593-201ENSMUST00000122507 106 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm24478-201ENSMUST00000157439 158 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm22727-201ENSMUST00000158090 116 ntBASIC2.12□□□□□ -2.07
RaraP11416 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm21885-201ENSMUST00000178891 327 ntBASIC2.12□□□□□ -2.07
RaraP11416 Mir7026-201ENSMUST00000184384 67 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm27419-201ENSMUST00000184576 109 ntBASIC2.12□□□□□ -2.07
RaraP11416 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm25635-201ENSMUST00000082675 131 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm26062-201ENSMUST00000083379 107 ntBASIC2.12□□□□□ -2.07
RaraP11416 Mir322-201ENSMUST00000083484 95 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.12□□□□□ -2.07
RaraP11416 Gm25094-201ENSMUST00000103992 131 ntBASIC2.11□□□□□ -2.07
RaraP11416 Mir344e-201ENSMUST00000104677 66 ntBASIC2.11□□□□□ -2.07
RaraP11416 Gm25730-201ENSMUST00000178753 165 ntBASIC2.11□□□□□ -2.07
RaraP11416 Gm27517-201ENSMUST00000184347 236 ntBASIC2.11□□□□□ -2.07
RaraP11416 Gm27639-201ENSMUST00000184937 85 ntBASIC2.11□□□□□ -2.07
RaraP11416 Gm27544-201ENSMUST00000185069 155 ntBASIC2.11□□□□□ -2.07
RaraP11416 Gm3702-201ENSMUST00000211754 346 ntBASIC2.11□□□□□ -2.07
RaraP11416 Gm23010-201ENSMUST00000104151 126 ntBASIC2.1□□□□□ -2.07
RaraP11416 Gm26358-201ENSMUST00000158215 97 ntBASIC2.1□□□□□ -2.07
RaraP11416 Gm24770-201ENSMUST00000158505 92 ntBASIC2.1□□□□□ -2.07
RaraP11416 Gm22140-201ENSMUST00000158745 120 ntBASIC2.1□□□□□ -2.07
RaraP11416 Mir6901-201ENSMUST00000185062 62 ntBASIC2.1□□□□□ -2.07
RaraP11416 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.1□□□□□ -2.07
RaraP11416 Gm24098-201ENSMUST00000102075 109 ntBASIC2.09□□□□□ -2.07
RaraP11416 Gm25381-201ENSMUST00000102078 109 ntBASIC2.09□□□□□ -2.07
RaraP11416 Gm25061-201ENSMUST00000104665 107 ntBASIC2.09□□□□□ -2.07
RaraP11416 Mir1191-201ENSMUST00000116883 120 ntBASIC2.09□□□□□ -2.07
RaraP11416 Gm23172-201ENSMUST00000157160 124 ntBASIC2.09□□□□□ -2.07
RaraP11416 Gm22914-201ENSMUST00000175195 77 ntBASIC2.09□□□□□ -2.07
RaraP11416 Mir7021-201ENSMUST00000197026 63 ntBASIC2.09□□□□□ -2.07
RaraP11416 Gm43512-201ENSMUST00000198495 176 ntBASIC2.09□□□□□ -2.07
RaraP11416 Gm14923-201ENSMUST00000118270 155 ntBASIC2.08□□□□□ -2.08
RaraP11416 Gm14884-201ENSMUST00000120456 196 ntBASIC2.08□□□□□ -2.08
RaraP11416 Gm23469-201ENSMUST00000157131 104 ntBASIC2.08□□□□□ -2.08
RaraP11416 Gm24399-201ENSMUST00000157869 74 ntBASIC2.08□□□□□ -2.08
RaraP11416 Gm22540-201ENSMUST00000158168 117 ntBASIC2.08□□□□□ -2.08
RaraP11416 Mir1950-201ENSMUST00000158526 74 ntBASIC2.08□□□□□ -2.08
RaraP11416 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.08□□□□□ -2.08
RaraP11416 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RaraP11416 Gm22944-201ENSMUST00000158662 133 ntBASIC2.07□□□□□ -2.08
RaraP11416 Mir7225-201ENSMUST00000184178 54 ntBASIC2.07□□□□□ -2.08
RaraP11416 Mir6950-201ENSMUST00000184438 73 ntBASIC2.07□□□□□ -2.08
RaraP11416 Gm27686-201ENSMUST00000185123 91 ntBASIC2.07□□□□□ -2.08
RaraP11416 Gm28767-201ENSMUST00000188601 114 ntBASIC2.07□□□□□ -2.08
RaraP11416 Gm25696-201ENSMUST00000082900 105 ntBASIC2.07□□□□□ -2.08
RaraP11416 Gm25014-201ENSMUST00000158401 103 ntBASIC2.06□□□□□ -2.08
RaraP11416 Gm22802-201ENSMUST00000175621 89 ntBASIC2.06□□□□□ -2.08
RaraP11416 Gm27365-201ENSMUST00000184041 177 ntBASIC2.06□□□□□ -2.08
RaraP11416 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.06□□□□□ -2.08
RaraP11416 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.06□□□□□ -2.08
RaraP11416 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RaraP11416 Gm23267-201ENSMUST00000178490 132 ntBASIC2.05□□□□□ -2.08
RaraP11416 Gm27975-201ENSMUST00000184400 101 ntBASIC2.05□□□□□ -2.08
RaraP11416 Gm23100-201ENSMUST00000083455 141 ntBASIC2.05□□□□□ -2.08
RaraP11416 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RaraP11416 Gm23715-201ENSMUST00000157354 106 ntBASIC2.04□□□□□ -2.08
RaraP11416 Gm25658-201ENSMUST00000158472 128 ntBASIC2.04□□□□□ -2.08
RaraP11416 Gm24674-201ENSMUST00000179194 104 ntBASIC2.04□□□□□ -2.08
RaraP11416 Mir34c-201ENSMUST00000083653 77 ntBASIC2.04□□□□□ -2.08
RaraP11416 Gm23528-201ENSMUST00000104571 132 ntBASIC2.03□□□□□ -2.08
RaraP11416 Mir1187-201ENSMUST00000116936 122 ntBASIC2.03□□□□□ -2.08
RaraP11416 Gm24183-201ENSMUST00000122572 93 ntBASIC2.03□□□□□ -2.08
RaraP11416 Mir1899-201ENSMUST00000122798 96 ntBASIC2.03□□□□□ -2.08
RaraP11416 Gm22887-201ENSMUST00000178586 107 ntBASIC2.03□□□□□ -2.08
RaraP11416 Mir6995-201ENSMUST00000183658 71 ntBASIC2.03□□□□□ -2.08
RaraP11416 Gm27415-201ENSMUST00000183720 95 ntBASIC2.03□□□□□ -2.08
RaraP11416 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
RaraP11416 Gm22205-201ENSMUST00000122655 71 ntBASIC2.02□□□□□ -2.09
RaraP11416 Gm23900-201ENSMUST00000157569 108 ntBASIC2.02□□□□□ -2.09
RaraP11416 Gm25423-201ENSMUST00000157609 107 ntBASIC2.02□□□□□ -2.09
RaraP11416 Gm23410-201ENSMUST00000179967 107 ntBASIC2.02□□□□□ -2.09
RaraP11416 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.02□□□□□ -2.09
RaraP11416 Gm45197-201ENSMUST00000205288 151 ntBASIC2.02□□□□□ -2.09
RaraP11416 Gm22505-201ENSMUST00000082956 108 ntBASIC2.02□□□□□ -2.09
RaraP11416 Gm22363-201ENSMUST00000083100 108 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 206.9 ms