Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Smarce1O54941 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.61□□□□□ -2.31
Smarce1O54941 Mir1191-201ENSMUST00000116883 120 ntBASIC0.6□□□□□ -2.31
Smarce1O54941 Gm23857-201ENSMUST00000158379 111 ntBASIC0.6□□□□□ -2.31
Smarce1O54941 Gm26158-201ENSMUST00000158973 119 ntBASIC0.6□□□□□ -2.31
Smarce1O54941 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Smarce1O54941 Gm43432-201ENSMUST00000196352 121 ntBASIC0.6□□□□□ -2.31
Smarce1O54941 Gm24920-201ENSMUST00000083018 85 ntBASIC0.6□□□□□ -2.31
Smarce1O54941 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.59□□□□□ -2.31
Smarce1O54941 Gm26091-201ENSMUST00000122704 82 ntBASIC0.59□□□□□ -2.31
Smarce1O54941 Gm37330-201ENSMUST00000192606 153 ntBASIC0.59□□□□□ -2.31
Smarce1O54941 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.59□□□□□ -2.31
Smarce1O54941 Gm44469-201ENSMUST00000198558 79 ntBASIC0.59□□□□□ -2.31
Smarce1O54941 Gm23301-201ENSMUST00000082713 65 ntBASIC0.59□□□□□ -2.31
Smarce1O54941 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Smarce1O54941 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
Smarce1O54941 Gm26018-201ENSMUST00000104406 128 ntBASIC0.58□□□□□ -2.32
Smarce1O54941 Gm14884-201ENSMUST00000120456 196 ntBASIC0.58□□□□□ -2.32
Smarce1O54941 Gm26484-201ENSMUST00000158018 106 ntBASIC0.58□□□□□ -2.32
Smarce1O54941 Mir6481-201ENSMUST00000184617 110 ntBASIC0.58□□□□□ -2.32
Smarce1O54941 Gm12469-201ENSMUST00000117623 207 ntBASIC0.57□□□□□ -2.32
Smarce1O54941 Gm22522-201ENSMUST00000158271 151 ntBASIC0.57□□□□□ -2.32
Smarce1O54941 Gm24323-201ENSMUST00000175342 77 ntBASIC0.57□□□□□ -2.32
Smarce1O54941 Mir377-201ENSMUST00000083504 68 ntBASIC0.57□□□□□ -2.32
Smarce1O54941 Gm24246-201ENSMUST00000157315 132 ntBASIC0.56□□□□□ -2.32
Smarce1O54941 Gm25976-201ENSMUST00000158695 130 ntBASIC0.56□□□□□ -2.32
Smarce1O54941 Gm24223-201ENSMUST00000158827 90 ntBASIC0.56□□□□□ -2.32
Smarce1O54941 Gm23988-201ENSMUST00000117034 122 ntBASIC0.55□□□□□ -2.32
Smarce1O54941 Mir7010-201ENSMUST00000183464 63 ntBASIC0.55□□□□□ -2.32
Smarce1O54941 Gm25300-201ENSMUST00000175284 84 ntBASIC0.54□□□□□ -2.32
Smarce1O54941 Gm22565-201ENSMUST00000175540 69 ntBASIC0.54□□□□□ -2.32
Smarce1O54941 Gm27699-201ENSMUST00000183553 180 ntBASIC0.54□□□□□ -2.32
Smarce1O54941 Gm22469-201ENSMUST00000104118 133 ntBASIC0.53□□□□□ -2.32
Smarce1O54941 Gm22520-201ENSMUST00000158269 129 ntBASIC0.53□□□□□ -2.32
Smarce1O54941 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.53□□□□□ -2.32
Smarce1O54941 Gm22673-201ENSMUST00000104415 131 ntBASIC0.52□□□□□ -2.33
Smarce1O54941 Gm24718-201ENSMUST00000157521 136 ntBASIC0.52□□□□□ -2.33
Smarce1O54941 Gm26084-201ENSMUST00000157903 104 ntBASIC0.52□□□□□ -2.33
Smarce1O54941 Gm26290-201ENSMUST00000158891 145 ntBASIC0.52□□□□□ -2.33
Smarce1O54941 Gm25693-201ENSMUST00000175443 85 ntBASIC0.52□□□□□ -2.33
Smarce1O54941 Mir6342-201ENSMUST00000183870 125 ntBASIC0.52□□□□□ -2.33
Smarce1O54941 Gm24141-201ENSMUST00000122776 115 ntBASIC0.51□□□□□ -2.33
Smarce1O54941 Mir669j-201ENSMUST00000179023 121 ntBASIC0.51□□□□□ -2.33
Smarce1O54941 Gm25081-201ENSMUST00000082534 108 ntBASIC0.51□□□□□ -2.33
Smarce1O54941 Gm22911-201ENSMUST00000177920 107 ntBASIC0.5□□□□□ -2.33
Smarce1O54941 Mir6389-201ENSMUST00000183661 102 ntBASIC0.5□□□□□ -2.33
Smarce1O54941 Gm27668-201ENSMUST00000184188 120 ntBASIC0.5□□□□□ -2.33
Smarce1O54941 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.5□□□□□ -2.33
Smarce1O54941 Mir448-201ENSMUST00000083516 112 ntBASIC0.5□□□□□ -2.33
Smarce1O54941 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Smarce1O54941 Gm22003-201ENSMUST00000101885 107 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm24683-201ENSMUST00000104840 88 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm22030-201ENSMUST00000116942 63 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm24290-201ENSMUST00000157634 96 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm23410-201ENSMUST00000179967 107 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm22756-201ENSMUST00000180118 107 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm22505-201ENSMUST00000082956 108 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm22363-201ENSMUST00000083100 108 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm23814-201ENSMUST00000083230 102 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm23095-201ENSMUST00000083446 107 ntBASIC0.49□□□□□ -2.33
Smarce1O54941 Gm24263-201ENSMUST00000104059 107 ntBASIC0.48□□□□□ -2.33
Smarce1O54941 Gm23605-201ENSMUST00000157255 127 ntBASIC0.48□□□□□ -2.33
Smarce1O54941 Gm24717-201ENSMUST00000157522 124 ntBASIC0.48□□□□□ -2.33
Smarce1O54941 Gm25600-201ENSMUST00000158357 106 ntBASIC0.48□□□□□ -2.33
Smarce1O54941 Traj61-201ENSMUST00000165025 72 ntBASIC0.48□□□□□ -2.33
Smarce1O54941 Gm25170-201ENSMUST00000104191 129 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm11248-201ENSMUST00000119568 201 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm25393-201ENSMUST00000157336 285 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm22541-201ENSMUST00000158165 127 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm24129-201ENSMUST00000158537 97 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm26398-201ENSMUST00000179015 127 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm29535-201ENSMUST00000185723 109 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm28143-201ENSMUST00000191082 109 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm45492-201ENSMUST00000211611 288 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm25894-201ENSMUST00000083458 75 ntBASIC0.47□□□□□ -2.33
Smarce1O54941 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Smarce1O54941 Gm23260-201ENSMUST00000158317 172 ntBASIC0.46□□□□□ -2.34
Smarce1O54941 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.46□□□□□ -2.34
Smarce1O54941 Gm23722-201ENSMUST00000083002 130 ntBASIC0.46□□□□□ -2.34
Smarce1O54941 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Smarce1O54941 Gm26303-201ENSMUST00000116845 119 ntBASIC0.45□□□□□ -2.34
Smarce1O54941 Gm22349-201ENSMUST00000157864 107 ntBASIC0.45□□□□□ -2.34
Smarce1O54941 Gm22966-201ENSMUST00000157957 129 ntBASIC0.45□□□□□ -2.34
Smarce1O54941 Gm25367-201ENSMUST00000158846 106 ntBASIC0.45□□□□□ -2.34
Smarce1O54941 Gm45541-201ENSMUST00000210443 54 ntBASIC0.45□□□□□ -2.34
Smarce1O54941 Gm25091-201ENSMUST00000103997 71 ntBASIC0.44□□□□□ -2.34
Smarce1O54941 Gm25274-201ENSMUST00000104296 135 ntBASIC0.44□□□□□ -2.34
Smarce1O54941 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.44□□□□□ -2.34
Smarce1O54941 Gm22451-201ENSMUST00000122803 151 ntBASIC0.44□□□□□ -2.34
Smarce1O54941 Gm24963-201ENSMUST00000157916 144 ntBASIC0.44□□□□□ -2.34
Smarce1O54941 Mir1949-202ENSMUST00000199259 70 ntBASIC0.44□□□□□ -2.34
Smarce1O54941 Gm44455-201ENSMUST00000200061 82 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms