Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm24624-201ENSMUST00000082617 164 ntBASIC0.95□□□□□ -2.26
DffbO54788 Gm22753-201ENSMUST00000083657 107 ntBASIC0.95□□□□□ -2.26
DffbO54788 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
DffbO54788 Mir1191-201ENSMUST00000116883 120 ntBASIC0.94□□□□□ -2.26
DffbO54788 Gm11248-201ENSMUST00000119568 201 ntBASIC0.94□□□□□ -2.26
DffbO54788 Gm23636-201ENSMUST00000175070 95 ntBASIC0.94□□□□□ -2.26
DffbO54788 Mir8116-201ENSMUST00000184134 97 ntBASIC0.94□□□□□ -2.26
DffbO54788 Gm44488-201ENSMUST00000199467 119 ntBASIC0.94□□□□□ -2.26
DffbO54788 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
DffbO54788 Gm23434-201ENSMUST00000157179 100 ntBASIC0.93□□□□□ -2.26
DffbO54788 Gm25901-201ENSMUST00000158494 130 ntBASIC0.93□□□□□ -2.26
DffbO54788 Mir6381-201ENSMUST00000183426 87 ntBASIC0.93□□□□□ -2.26
DffbO54788 Gm27894-201ENSMUST00000184177 92 ntBASIC0.93□□□□□ -2.26
DffbO54788 Trbv25-201ENSMUST00000194700 273 ntBASIC0.93□□□□□ -2.26
DffbO54788 Gm43944-201ENSMUST00000205220 120 ntBASIC0.93□□□□□ -2.26
DffbO54788 Gm25006-201ENSMUST00000083813 107 ntBASIC0.93□□□□□ -2.26
DffbO54788 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
DffbO54788 Gm24605-201ENSMUST00000104772 96 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm12432-201ENSMUST00000119540 186 ntBASIC0.92□□□□□ -2.26
DffbO54788 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm24916-201ENSMUST00000157287 79 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm23328-201ENSMUST00000157418 132 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm24476-201ENSMUST00000157437 131 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm26290-201ENSMUST00000158891 145 ntBASIC0.92□□□□□ -2.26
DffbO54788 Mir8119-201ENSMUST00000183371 129 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm42533-201ENSMUST00000196247 157 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm43324-201ENSMUST00000197482 289 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.92□□□□□ -2.26
DffbO54788 Mir500-201ENSMUST00000093600 92 ntBASIC0.92□□□□□ -2.26
DffbO54788 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.92□□□□□ -2.26
DffbO54788 Gm22786-201ENSMUST00000104086 122 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm23881-201ENSMUST00000116872 66 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm24547-201ENSMUST00000158649 149 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm26029-201ENSMUST00000158659 132 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm24223-201ENSMUST00000158827 90 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm22638-201ENSMUST00000179674 107 ntBASIC0.91□□□□□ -2.26
DffbO54788 Mir21c-201ENSMUST00000184910 78 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm38323-201ENSMUST00000192450 210 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.91□□□□□ -2.26
DffbO54788 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.91□□□□□ -2.26
DffbO54788 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm23138-201ENSMUST00000083365 103 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.91□□□□□ -2.26
DffbO54788 Gm24379-201ENSMUST00000122695 86 ntBASIC0.9□□□□□ -2.27
DffbO54788 Gm25768-201ENSMUST00000158570 98 ntBASIC0.9□□□□□ -2.27
DffbO54788 Gm25069-201ENSMUST00000175238 86 ntBASIC0.9□□□□□ -2.27
DffbO54788 Gm37330-201ENSMUST00000192606 153 ntBASIC0.9□□□□□ -2.27
DffbO54788 Snord60-201ENSMUST00000082834 78 ntBASIC0.9□□□□□ -2.27
DffbO54788 Mir30a-201ENSMUST00000083471 71 ntBASIC0.9□□□□□ -2.27
DffbO54788 Mir764-201ENSMUST00000103259 108 ntBASIC0.89□□□□□ -2.27
DffbO54788 Gm12013-201ENSMUST00000121971 155 ntBASIC0.89□□□□□ -2.27
DffbO54788 Gm26274-201ENSMUST00000157103 321 ntBASIC0.89□□□□□ -2.27
DffbO54788 Gm24020-201ENSMUST00000180156 108 ntBASIC0.89□□□□□ -2.27
DffbO54788 Gm36956-201ENSMUST00000193830 214 ntBASIC0.89□□□□□ -2.27
DffbO54788 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.89□□□□□ -2.27
DffbO54788 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.89□□□□□ -2.27
DffbO54788 Mir22-201ENSMUST00000083595 95 ntBASIC0.89□□□□□ -2.27
DffbO54788 Gm22772-201ENSMUST00000104451 121 ntBASIC0.88□□□□□ -2.27
DffbO54788 Gm24549-201ENSMUST00000158647 139 ntBASIC0.88□□□□□ -2.27
DffbO54788 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.88□□□□□ -2.27
DffbO54788 Mir15a-201ENSMUST00000175266 84 ntBASIC0.88□□□□□ -2.27
DffbO54788 Gm22466-201ENSMUST00000175278 69 ntBASIC0.88□□□□□ -2.27
DffbO54788 Gm26498-201ENSMUST00000177799 79 ntBASIC0.88□□□□□ -2.27
DffbO54788 Gm26398-201ENSMUST00000179015 127 ntBASIC0.88□□□□□ -2.27
DffbO54788 Gm26230-201ENSMUST00000180141 79 ntBASIC0.88□□□□□ -2.27
DffbO54788 Gm12469-201ENSMUST00000117623 207 ntBASIC0.87□□□□□ -2.27
DffbO54788 Gm25683-201ENSMUST00000083940 131 ntBASIC0.87□□□□□ -2.27
DffbO54788 Mir802-201ENSMUST00000103258 97 ntBASIC0.86□□□□□ -2.27
DffbO54788 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.86□□□□□ -2.27
DffbO54788 Gm6272-201ENSMUST00000121256 171 ntBASIC0.86□□□□□ -2.27
DffbO54788 Gm24649-201ENSMUST00000157106 134 ntBASIC0.86□□□□□ -2.27
DffbO54788 Gm23986-201ENSMUST00000157144 63 ntBASIC0.86□□□□□ -2.27
DffbO54788 Gm23857-201ENSMUST00000158379 111 ntBASIC0.86□□□□□ -2.27
DffbO54788 Gm38274-201ENSMUST00000195689 148 ntBASIC0.86□□□□□ -2.27
DffbO54788 Gm23507-201ENSMUST00000083078 107 ntBASIC0.86□□□□□ -2.27
DffbO54788 Gm24252-201ENSMUST00000083700 132 ntBASIC0.86□□□□□ -2.27
DffbO54788 Snord35a-201ENSMUST00000083884 90 ntBASIC0.86□□□□□ -2.27
DffbO54788 Snord69-201ENSMUST00000104024 80 ntBASIC0.85□□□□□ -2.27
DffbO54788 Gm26301-201ENSMUST00000104813 95 ntBASIC0.85□□□□□ -2.27
DffbO54788 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
DffbO54788 Gm23351-201ENSMUST00000158427 125 ntBASIC0.85□□□□□ -2.27
DffbO54788 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.85□□□□□ -2.27
DffbO54788 Gm45429-201ENSMUST00000209527 172 ntBASIC0.85□□□□□ -2.27
DffbO54788 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.85□□□□□ -2.27
DffbO54788 Gm22149-201ENSMUST00000104442 136 ntBASIC0.84□□□□□ -2.27
DffbO54788 Gm27656-201ENSMUST00000185055 80 ntBASIC0.84□□□□□ -2.27
DffbO54788 Gm28270-201ENSMUST00000188550 109 ntBASIC0.84□□□□□ -2.27
DffbO54788 Gm28328-201ENSMUST00000188869 109 ntBASIC0.84□□□□□ -2.27
DffbO54788 Gm44469-201ENSMUST00000198558 79 ntBASIC0.84□□□□□ -2.27
DffbO54788 Gm25138-201ENSMUST00000083248 136 ntBASIC0.84□□□□□ -2.27
DffbO54788 Snord32a-201ENSMUST00000083285 83 ntBASIC0.84□□□□□ -2.27
DffbO54788 Mir448-201ENSMUST00000083516 112 ntBASIC0.84□□□□□ -2.27
DffbO54788 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
DffbO54788 Gm22673-201ENSMUST00000104415 131 ntBASIC0.83□□□□□ -2.28
DffbO54788 Gm22031-201ENSMUST00000116945 126 ntBASIC0.83□□□□□ -2.28
DffbO54788 Gm23853-201ENSMUST00000158375 104 ntBASIC0.83□□□□□ -2.28
DffbO54788 Gm24500-201ENSMUST00000158447 124 ntBASIC0.83□□□□□ -2.28
DffbO54788 Gm23384-201ENSMUST00000158593 103 ntBASIC0.83□□□□□ -2.28
DffbO54788 Gm26158-201ENSMUST00000158973 119 ntBASIC0.83□□□□□ -2.28
DffbO54788 Gm10548-202ENSMUST00000165672 272 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 129.5 ms