Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-1.19□□□□□ -2.6
Col6a3E9PWQ3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
Col6a3E9PWQ3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.19□□□□□ -2.6
Col6a3E9PWQ3 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
Col6a3E9PWQ3 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.19□□□□□ -2.6
Col6a3E9PWQ3 Gm29513-201ENSMUST00000185741 202 ntBASIC-1.19□□□□□ -2.6
Col6a3E9PWQ3 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.19□□□□□ -2.6
Col6a3E9PWQ3 CT009718.4-201ENSMUST00000221881 109 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 AC192333.1-201ENSMUST00000224573 376 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Gm22606-201ENSMUST00000158290 103 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Gm25943-201ENSMUST00000103791 90 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Gm25619-201ENSMUST00000122621 104 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Gm22557-201ENSMUST00000157804 102 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Gm24461-201ENSMUST00000082735 103 ntBASIC-1.2□□□□□ -2.6
Col6a3E9PWQ3 Gm23492-201ENSMUST00000116837 115 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm14287-201ENSMUST00000121060 117 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm22584-201ENSMUST00000177935 92 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm22259-201ENSMUST00000178926 107 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm27715-201ENSMUST00000184714 260 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 AC154506.3-201ENSMUST00000225417 213 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm23941-201ENSMUST00000101953 107 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm13801-201ENSMUST00000120750 160 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm22215-201ENSMUST00000157558 96 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm27942-201ENSMUST00000184669 101 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 AC134601.1-201ENSMUST00000221058 109 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm25784-201ENSMUST00000122524 81 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm23568-201ENSMUST00000177960 92 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm25670-201ENSMUST00000178423 107 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm24829-201ENSMUST00000179245 92 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm42935-201ENSMUST00000202004 151 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm24292-201ENSMUST00000082888 107 ntBASIC-1.21□□□□□ -2.6
Col6a3E9PWQ3 Gm27926-201ENSMUST00000157180 66 ntBASIC-1.22□□□□□ -2.6
Col6a3E9PWQ3 Gm23640-201ENSMUST00000157860 104 ntBASIC-1.22□□□□□ -2.6
Col6a3E9PWQ3 Gm25223-201ENSMUST00000158200 110 ntBASIC-1.22□□□□□ -2.6
Col6a3E9PWQ3 Gm22113-201ENSMUST00000158343 104 ntBASIC-1.22□□□□□ -2.6
Col6a3E9PWQ3 Gm24962-201ENSMUST00000157917 109 ntBASIC-1.22□□□□□ -2.61
Col6a3E9PWQ3 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.22□□□□□ -2.61
Col6a3E9PWQ3 Gm24918-201ENSMUST00000083022 130 ntBASIC-1.22□□□□□ -2.61
Col6a3E9PWQ3 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm25434-201ENSMUST00000158278 167 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm22216-201ENSMUST00000157557 114 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm22850-201ENSMUST00000157714 82 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Snord98-201ENSMUST00000116819 65 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm38050-201ENSMUST00000191904 238 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Mir3969-201ENSMUST00000197106 92 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm22686-201ENSMUST00000082847 100 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm24202-201ENSMUST00000082948 103 ntBASIC-1.23□□□□□ -2.61
Col6a3E9PWQ3 Gm25563-201ENSMUST00000104603 74 ntBASIC-1.24□□□□□ -2.61
Col6a3E9PWQ3 Gm25184-201ENSMUST00000157753 163 ntBASIC-1.24□□□□□ -2.61
Col6a3E9PWQ3 Gm24487-201ENSMUST00000178017 63 ntBASIC-1.24□□□□□ -2.61
Col6a3E9PWQ3 Gm26398-201ENSMUST00000179015 127 ntBASIC-1.24□□□□□ -2.61
Col6a3E9PWQ3 Gm25781-201ENSMUST00000122527 84 ntBASIC-1.24□□□□□ -2.61
Col6a3E9PWQ3 Gm24877-201ENSMUST00000158779 116 ntBASIC-1.24□□□□□ -2.61
Col6a3E9PWQ3 Snord61-201ENSMUST00000083176 71 ntBASIC-1.24□□□□□ -2.61
Col6a3E9PWQ3 Gm23494-201ENSMUST00000116830 126 ntBASIC-1.25□□□□□ -2.61
Col6a3E9PWQ3 Gm23759-201ENSMUST00000158351 268 ntBASIC-1.25□□□□□ -2.61
Col6a3E9PWQ3 Gm23981-201ENSMUST00000157136 106 ntBASIC-1.25□□□□□ -2.61
Col6a3E9PWQ3 Gm23536-201ENSMUST00000157541 134 ntBASIC-1.25□□□□□ -2.61
Col6a3E9PWQ3 Gm24897-201ENSMUST00000179033 107 ntBASIC-1.25□□□□□ -2.61
Col6a3E9PWQ3 Gm26084-201ENSMUST00000157903 104 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Gm17919-201ENSMUST00000173344 312 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Gm23503-201ENSMUST00000083903 107 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Gm25684-201ENSMUST00000083941 107 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Mir743b-201ENSMUST00000104751 77 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Gm24577-201ENSMUST00000158580 63 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 AL603630.1-201ENSMUST00000214781 147 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Gm25930-201ENSMUST00000082785 107 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Gm23041-201ENSMUST00000083868 106 ntBASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.26□□□□□ -2.61
Col6a3E9PWQ3 Gm26420-201ENSMUST00000104273 103 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Snord100-201ENSMUST00000116836 74 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm25410-201ENSMUST00000083758 137 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm24983-201ENSMUST00000104457 69 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm11694-201ENSMUST00000118637 159 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm25014-201ENSMUST00000158401 103 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm43324-201ENSMUST00000197482 289 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm24867-201ENSMUST00000104161 107 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Mir466n-201ENSMUST00000104798 94 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm25364-201ENSMUST00000158851 107 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm28330-201ENSMUST00000190353 171 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm5034-201ENSMUST00000199115 634 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 AC120394.1-201ENSMUST00000217153 351 ntBASIC-1.27□□□□□ -2.61
Col6a3E9PWQ3 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.28□□□□□ -2.61
Col6a3E9PWQ3 Gm22212-201ENSMUST00000158096 106 ntBASIC-1.28□□□□□ -2.61
Col6a3E9PWQ3 Gm20462-201ENSMUST00000172623 408 ntBASIC-1.28□□□□□ -2.61
Col6a3E9PWQ3 Gm25512-201ENSMUST00000083863 107 ntBASIC-1.28□□□□□ -2.61
Col6a3E9PWQ3 Gm43976-201ENSMUST00000203637 235 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 172 ms