Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm24431-201ENSMUST00000104073 66 ntBASIC0.65□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22349-201ENSMUST00000157864 107 ntBASIC0.65□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22966-201ENSMUST00000157957 129 ntBASIC0.65□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.65□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm44488-201ENSMUST00000199467 119 ntBASIC0.65□□□□□ -2.31
Ighv3-4A0A0A6YXF1 DQ267101-201ENSMUST00000082562 73 ntBASIC0.65□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm14626-201ENSMUST00000117619 216 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm6272-201ENSMUST00000121256 171 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm24718-201ENSMUST00000157521 136 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm24500-201ENSMUST00000158447 124 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm24549-201ENSMUST00000158647 139 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22466-201ENSMUST00000175278 69 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Mir7079-201ENSMUST00000184697 69 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm44470-201ENSMUST00000203913 142 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm25138-201ENSMUST00000083248 136 ntBASIC0.64□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Snord69-201ENSMUST00000104024 80 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23126-201ENSMUST00000104260 134 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22544-201ENSMUST00000104349 127 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm24717-201ENSMUST00000157522 124 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22336-201ENSMUST00000157719 107 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23853-201ENSMUST00000158375 104 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm24001-201ENSMUST00000158463 85 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22775-201ENSMUST00000177630 120 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23569-201ENSMUST00000180120 120 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28435-201ENSMUST00000185496 108 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm38274-201ENSMUST00000195689 148 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm42935-201ENSMUST00000202004 151 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm45492-201ENSMUST00000211611 288 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm24449-201ENSMUST00000083985 106 ntBASIC0.63□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Mir20b-201ENSMUST00000102087 80 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23321-201ENSMUST00000104465 126 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23783-201ENSMUST00000157941 102 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm36956-201ENSMUST00000193830 214 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm44211-201ENSMUST00000204867 145 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23735-201ENSMUST00000082551 134 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Snord60-201ENSMUST00000082834 78 ntBASIC0.62□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23881-201ENSMUST00000116872 66 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23260-201ENSMUST00000158317 172 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm25071-201ENSMUST00000175232 70 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23416-201ENSMUST00000175520 95 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Mir669j-201ENSMUST00000179023 121 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm44859-201ENSMUST00000207831 94 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm20734-201ENSMUST00000216939 193 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22681-201ENSMUST00000083853 106 ntBASIC0.61□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Mir1191-201ENSMUST00000116883 120 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm26337-201ENSMUST00000178000 79 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm25814-201ENSMUST00000082754 107 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm23239-201ENSMUST00000083006 181 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Snord33-201ENSMUST00000083694 84 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm15289-201ENSMUST00000117793 244 ntBASIC0.59□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm16186-201ENSMUST00000120132 216 ntBASIC0.59□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm22286-201ENSMUST00000179708 107 ntBASIC0.59□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Trbv25-201ENSMUST00000194700 273 ntBASIC0.59□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Mir219b-201ENSMUST00000198317 65 ntBASIC0.59□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.59□□□□□ -2.31
Ighv3-4A0A0A6YXF1 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.59□□□□□ -2.31
Ighv3-4A0A0A6YXF1 Gm25367-201ENSMUST00000158846 106 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm26291-201ENSMUST00000158889 137 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Mir6364-201ENSMUST00000183396 86 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm27993-201ENSMUST00000184362 85 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm24527-201ENSMUST00000082920 107 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Mir101a-201ENSMUST00000083517 83 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Mir362-201ENSMUST00000093592 65 ntBASIC0.58□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm23857-201ENSMUST00000158379 111 ntBASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm24223-201ENSMUST00000158827 90 ntBASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm10548-202ENSMUST00000165672 272 ntBASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm23922-201ENSMUST00000178792 79 ntBASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm24657-201ENSMUST00000180085 79 ntBASIC0.57□□□□□ -2.32
Ighv3-4A0A0A6YXF1 Gm22996-201ENSMUST00000180236 79 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 152.8 ms