Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm26084-201ENSMUST00000157903 104 ntBASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Gm22966-201ENSMUST00000157957 129 ntBASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Snord32a-201ENSMUST00000083285 83 ntBASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Gm22753-201ENSMUST00000083657 107 ntBASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Mir695-201ENSMUST00000102261 109 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm24263-201ENSMUST00000104059 107 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm24238-201ENSMUST00000157792 98 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm25329-201ENSMUST00000158041 126 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm24728-201ENSMUST00000158226 125 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm25166-201ENSMUST00000158909 111 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm25444-201ENSMUST00000158999 113 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm43911-201ENSMUST00000203097 76 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.69□□□□□ -2.3
H2afb1S4R1E0 Mir1899-201ENSMUST00000122798 96 ntBASIC0.68□□□□□ -2.3
H2afb1S4R1E0 Gm23328-201ENSMUST00000157418 132 ntBASIC0.68□□□□□ -2.3
H2afb1S4R1E0 Gm24500-201ENSMUST00000158447 124 ntBASIC0.68□□□□□ -2.3
H2afb1S4R1E0 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.68□□□□□ -2.3
H2afb1S4R1E0 Gm23504-201ENSMUST00000158988 95 ntBASIC0.68□□□□□ -2.3
H2afb1S4R1E0 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.68□□□□□ -2.3
H2afb1S4R1E0 Mir216a-201ENSMUST00000083605 72 ntBASIC0.68□□□□□ -2.3
H2afb1S4R1E0 Gm24141-201ENSMUST00000122776 115 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm22775-201ENSMUST00000177630 120 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm23569-201ENSMUST00000180120 120 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm43944-201ENSMUST00000205220 120 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm20734-201ENSMUST00000216939 193 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm23735-201ENSMUST00000082551 134 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 DQ267101-201ENSMUST00000082562 73 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm23722-201ENSMUST00000083002 130 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm24449-201ENSMUST00000083985 106 ntBASIC0.67□□□□□ -2.3
H2afb1S4R1E0 Gm26338-201ENSMUST00000102372 110 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Gm16186-201ENSMUST00000120132 216 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Gm24476-201ENSMUST00000157437 131 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Gm24718-201ENSMUST00000157521 136 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Gm25071-201ENSMUST00000175232 70 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Mir7059-201ENSMUST00000184825 59 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Gm28767-201ENSMUST00000188601 114 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Gm44470-201ENSMUST00000203913 142 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.66□□□□□ -2.3
H2afb1S4R1E0 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm6272-201ENSMUST00000121256 171 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm23260-201ENSMUST00000158317 172 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm23760-201ENSMUST00000158350 116 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm25901-201ENSMUST00000158494 130 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm24549-201ENSMUST00000158647 139 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm27668-201ENSMUST00000184188 120 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm28435-201ENSMUST00000185496 108 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm44211-201ENSMUST00000204867 145 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm44859-201ENSMUST00000207831 94 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm45492-201ENSMUST00000211611 288 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm25814-201ENSMUST00000082754 107 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Mir30a-201ENSMUST00000083471 71 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm26168-201ENSMUST00000083787 112 ntBASIC0.65□□□□□ -2.31
H2afb1S4R1E0 Gm23766-201ENSMUST00000103894 80 ntBASIC0.64□□□□□ -2.31
H2afb1S4R1E0 Gm14626-201ENSMUST00000117619 216 ntBASIC0.64□□□□□ -2.31
H2afb1S4R1E0 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.64□□□□□ -2.31
H2afb1S4R1E0 Gm24001-201ENSMUST00000158463 85 ntBASIC0.64□□□□□ -2.31
H2afb1S4R1E0 Gm23416-201ENSMUST00000175520 95 ntBASIC0.64□□□□□ -2.31
H2afb1S4R1E0 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.64□□□□□ -2.31
H2afb1S4R1E0 Mir196b-201ENSMUST00000083509 85 ntBASIC0.64□□□□□ -2.31
H2afb1S4R1E0 Snord69-201ENSMUST00000104024 80 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Gm23881-201ENSMUST00000116872 66 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Mir1191-201ENSMUST00000116883 120 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Gm22842-201ENSMUST00000157709 118 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Gm22384-201ENSMUST00000158187 104 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Gm25715-201ENSMUST00000158627 125 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Gm24547-201ENSMUST00000158649 149 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Gm22466-201ENSMUST00000175278 69 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Gm42935-201ENSMUST00000202004 151 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Snord33-201ENSMUST00000083694 84 ntBASIC0.63□□□□□ -2.31
H2afb1S4R1E0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm15289-201ENSMUST00000117793 244 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm26274-201ENSMUST00000157103 321 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm24717-201ENSMUST00000157522 124 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm23853-201ENSMUST00000158375 104 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm25367-201ENSMUST00000158846 106 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm26291-201ENSMUST00000158889 137 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm26337-201ENSMUST00000178000 79 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm23922-201ENSMUST00000178792 79 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm24657-201ENSMUST00000180085 79 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm22996-201ENSMUST00000180236 79 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm36956-201ENSMUST00000193830 214 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Trbv25-201ENSMUST00000194700 273 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm23239-201ENSMUST00000083006 181 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Mir33-201ENSMUST00000083531 69 ntBASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
H2afb1S4R1E0 Gm25680-201ENSMUST00000116917 126 ntBASIC0.61□□□□□ -2.31
H2afb1S4R1E0 Gm22635-201ENSMUST00000116962 126 ntBASIC0.61□□□□□ -2.31
H2afb1S4R1E0 Gm24678-201ENSMUST00000158756 104 ntBASIC0.61□□□□□ -2.31
H2afb1S4R1E0 Gm26290-201ENSMUST00000158891 145 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 176.5 ms