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Protein–RNA interactions for Protein: Q9Z2C6
Upk1b, Uroplakin-1b, mouse
Predictions only
Length
260 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (Experimental data)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
Upk1b
Q9Z2C6
Gm22332-201
ENSMUST00000158072
126 nt
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm22433-201
ENSMUST00000158550
142 nt
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm23567-201
ENSMUST00000178005
107 nt
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm27521-201
ENSMUST00000184022
64 nt
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm28376-201
ENSMUST00000186604
176 nt
TSL 5
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm38109-201
ENSMUST00000195386
181 nt
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm44387-201
ENSMUST00000196298
145 nt
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
AL845349.1-201
ENSMUST00000213794
78 nt
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm10139-201
ENSMUST00000081471
171 nt
APPRIS P1
BASIC
-0.54
□□□□□ -2.5
Upk1b
Q9Z2C6
Traj21-201
ENSMUST00000103720
57 nt
APPRIS P1
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm14626-201
ENSMUST00000117619
216 nt
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25600-201
ENSMUST00000158357
106 nt
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25364-201
ENSMUST00000158851
107 nt
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25464-201
ENSMUST00000175481
107 nt
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Mir7038-201
ENSMUST00000184833
71 nt
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm28418-201
ENSMUST00000186179
423 nt
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25802-201
ENSMUST00000082639
77 nt
BASIC
-0.55
□□□□□ -2.5
Upk1b
Q9Z2C6
Mir20b-201
ENSMUST00000102087
80 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25610-201
ENSMUST00000104016
129 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Mir1191-201
ENSMUST00000116883
120 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm11835-201
ENSMUST00000120635
663 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm23466-201
ENSMUST00000157133
106 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Mir344-2-201
ENSMUST00000175446
80 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Defb38-201
ENSMUST00000066416
286 nt
APPRIS P1
TSL 1 (best)
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25588-201
ENSMUST00000082501
140 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm22571-201
ENSMUST00000082984
70 nt
BASIC
-0.56
□□□□□ -2.5
Upk1b
Q9Z2C6
Vmn1r-ps120-201
ENSMUST00000120288
377 nt
BASIC
-0.57
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm12924-201
ENSMUST00000121747
318 nt
BASIC
-0.57
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm24006-201
ENSMUST00000158462
132 nt
BASIC
-0.57
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm26160-201
ENSMUST00000158965
63 nt
BASIC
-0.57
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm26712-201
ENSMUST00000180813
217 nt
BASIC
-0.57
□□□□□ -2.5
Upk1b
Q9Z2C6
Mir181b-2-201
ENSMUST00000083644
89 nt
BASIC
-0.57
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm24587-201
ENSMUST00000116697
89 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm26474-201
ENSMUST00000116762
122 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm22607-201
ENSMUST00000158291
105 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm22838-201
ENSMUST00000158437
99 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25267-201
ENSMUST00000158522
63 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm24129-201
ENSMUST00000158537
97 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25328-201
ENSMUST00000175013
107 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm22509-201
ENSMUST00000082775
107 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm23442-201
ENSMUST00000082919
134 nt
BASIC
-0.58
□□□□□ -2.5
Upk1b
Q9Z2C6
n-R5s39-201
ENSMUST00000122613
108 nt
BASIC
-0.59
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm25935-201
ENSMUST00000178746
107 nt
BASIC
-0.59
□□□□□ -2.5
Upk1b
Q9Z2C6
Mir6928-201
ENSMUST00000185166
70 nt
BASIC
-0.59
□□□□□ -2.5
Upk1b
Q9Z2C6
Scgb1b6-ps-201
ENSMUST00000185337
199 nt
BASIC
-0.59
□□□□□ -2.5
Upk1b
Q9Z2C6
Snora16a-202
ENSMUST00000196061
137 nt
BASIC
-0.59
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm6607-201
ENSMUST00000215035
328 nt
BASIC
-0.59
□□□□□ -2.5
Upk1b
Q9Z2C6
Mir363-201
ENSMUST00000093598
75 nt
BASIC
-0.59
□□□□□ -2.5
Upk1b
Q9Z2C6
Gm23483-201
ENSMUST00000104179
108 nt
BASIC
-0.6
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm15030-201
ENSMUST00000119804
484 nt
BASIC
-0.6
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm22790-201
ENSMUST00000157229
129 nt
BASIC
-0.6
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm24843-201
ENSMUST00000158682
76 nt
BASIC
-0.6
□□□□□ -2.51
Upk1b
Q9Z2C6
Mir7657-201
ENSMUST00000196051
57 nt
BASIC
-0.6
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm10222-201
ENSMUST00000088336
294 nt
BASIC
-0.6
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm25756-201
ENSMUST00000103990
136 nt
BASIC
-0.61
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm12686-201
ENSMUST00000120546
397 nt
BASIC
-0.61
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm22100-201
ENSMUST00000157926
63 nt
BASIC
-0.61
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm44468-201
ENSMUST00000199516
105 nt
BASIC
-0.61
□□□□□ -2.51
Upk1b
Q9Z2C6
AC154213.2-201
ENSMUST00000227138
187 nt
BASIC
-0.61
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm23406-201
ENSMUST00000082537
122 nt
BASIC
-0.61
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm26421-201
ENSMUST00000104279
132 nt
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm24238-201
ENSMUST00000157792
98 nt
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm28398-201
ENSMUST00000186587
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm29653-201
ENSMUST00000187192
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm28810-201
ENSMUST00000188173
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm28575-201
ENSMUST00000188234
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm28132-201
ENSMUST00000189901
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm29580-201
ENSMUST00000189921
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm28858-201
ENSMUST00000190517
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm28210-201
ENSMUST00000190631
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm28336-201
ENSMUST00000190743
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm29042-201
ENSMUST00000191564
166 nt
TSL 5
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm44989-201
ENSMUST00000204749
217 nt
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm45313-201
ENSMUST00000210584
178 nt
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm26447-201
ENSMUST00000082448
129 nt
BASIC
-0.62
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm22079-201
ENSMUST00000157592
106 nt
BASIC
-0.63
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm26194-201
ENSMUST00000175036
71 nt
BASIC
-0.63
□□□□□ -2.51
Upk1b
Q9Z2C6
Mir141-201
ENSMUST00000083540
72 nt
BASIC
-0.63
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm11749-201
ENSMUST00000127327
184 nt
TSL 2
BASIC
-0.64
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm24868-201
ENSMUST00000157265
136 nt
BASIC
-0.64
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm24009-201
ENSMUST00000157734
93 nt
BASIC
-0.64
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm24077-201
ENSMUST00000158183
136 nt
BASIC
-0.64
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm37750-201
ENSMUST00000193563
129 nt
BASIC
-0.64
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm22557-201
ENSMUST00000157804
102 nt
BASIC
-0.65
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm25974-201
ENSMUST00000158701
94 nt
BASIC
-0.65
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm27585-201
ENSMUST00000183717
199 nt
BASIC
-0.65
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm36929-201
ENSMUST00000195152
166 nt
TSL 5
BASIC
-0.65
□□□□□ -2.51
Upk1b
Q9Z2C6
AC155241.1-201
ENSMUST00000222709
415 nt
TSL 5
BASIC
-0.65
□□□□□ -2.51
Upk1b
Q9Z2C6
Gm24223-201
ENSMUST00000158827
90 nt
BASIC
-0.66
□□□□□ -2.52
Upk1b
Q9Z2C6
Gm42623-201
ENSMUST00000197225
379 nt
BASIC
-0.66
□□□□□ -2.52
Upk1b
Q9Z2C6
AC192091.2-201
ENSMUST00000217869
117 nt
BASIC
-0.66
□□□□□ -2.52
Upk1b
Q9Z2C6
Snora16a-201
ENSMUST00000083163
136 nt
BASIC
-0.66
□□□□□ -2.52
Upk1b
Q9Z2C6
Mir146-201
ENSMUST00000083667
65 nt
BASIC
-0.66
□□□□□ -2.52
Upk1b
Q9Z2C6
Gm10719-202
ENSMUST00000099049
675 nt
APPRIS ALT2
TSL 5
BASIC
-0.66
□□□□□ -2.52
Upk1b
Q9Z2C6
Gm25388-201
ENSMUST00000157339
151 nt
BASIC
-0.67
□□□□□ -2.52
Upk1b
Q9Z2C6
Gm25160-201
ENSMUST00000158914
102 nt
BASIC
-0.67
□□□□□ -2.52
Upk1b
Q9Z2C6
Gm27747-201
ENSMUST00000184707
85 nt
BASIC
-0.67
□□□□□ -2.52
Upk1b
Q9Z2C6
Gm18665-201
ENSMUST00000189783
270 nt
BASIC
-0.67
□□□□□ -2.52
Upk1b
Q9Z2C6
Gm43927-201
ENSMUST00000204599
117 nt
BASIC
-0.67
□□□□□ -2.52
Upk1b
Q9Z2C6
AC192333.1-201
ENSMUST00000224573
376 nt
BASIC
-0.67
□□□□□ -2.52
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