Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm25635-201ENSMUST00000082675 131 ntBASIC2.45□□□□□ -2.02
Nubp1Q9R060 Gm23056-201ENSMUST00000082803 111 ntBASIC2.45□□□□□ -2.02
Nubp1Q9R060 Mir5117-201ENSMUST00000083226 84 ntBASIC2.45□□□□□ -2.02
Nubp1Q9R060 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Nubp1Q9R060 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
Nubp1Q9R060 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Nubp1Q9R060 DQ267100-201ENSMUST00000122600 72 ntBASIC2.44□□□□□ -2.02
Nubp1Q9R060 Gm26277-201ENSMUST00000157097 152 ntBASIC2.44□□□□□ -2.02
Nubp1Q9R060 Gm27700-201ENSMUST00000185003 81 ntBASIC2.44□□□□□ -2.02
Nubp1Q9R060 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Nubp1Q9R060 Gm25500-201ENSMUST00000104426 123 ntBASIC2.43□□□□□ -2.02
Nubp1Q9R060 Gm26247-201ENSMUST00000116702 91 ntBASIC2.43□□□□□ -2.02
Nubp1Q9R060 Gm24475-201ENSMUST00000157435 143 ntBASIC2.43□□□□□ -2.02
Nubp1Q9R060 Gm25423-201ENSMUST00000157609 107 ntBASIC2.43□□□□□ -2.02
Nubp1Q9R060 Gm27987-201ENSMUST00000184023 93 ntBASIC2.43□□□□□ -2.02
Nubp1Q9R060 Gm22458-201ENSMUST00000082576 107 ntBASIC2.43□□□□□ -2.02
Nubp1Q9R060 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.43□□□□□ -2.02
Nubp1Q9R060 Gm23951-201ENSMUST00000104029 132 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 Mir669d-201ENSMUST00000104644 121 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 Gm24384-201ENSMUST00000122693 75 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 Gm24399-201ENSMUST00000157869 74 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 Gm16111-201ENSMUST00000162128 285 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 Gm25470-201ENSMUST00000175576 111 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 Gm28862-201ENSMUST00000188246 163 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 Snord14a-201ENSMUST00000082807 87 ntBASIC2.42□□□□□ -2.02
Nubp1Q9R060 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nubp1Q9R060 Gm5900-201ENSMUST00000179862 375 ntBASIC2.41□□□□□ -2.02
Nubp1Q9R060 Gm37557-201ENSMUST00000191640 139 ntBASIC2.41□□□□□ -2.02
Nubp1Q9R060 Mir184-201ENSMUST00000083662 69 ntBASIC2.41□□□□□ -2.02
Nubp1Q9R060 Gm23803-201ENSMUST00000104610 132 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 Gm22486-201ENSMUST00000116815 137 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 Gm23715-201ENSMUST00000157354 106 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 Gm22539-201ENSMUST00000158167 117 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 Gm23763-201ENSMUST00000158345 60 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 Gm25636-201ENSMUST00000082666 133 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 Snord104-201ENSMUST00000083192 70 ntBASIC2.4□□□□□ -2.03
Nubp1Q9R060 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Nubp1Q9R060 Mir466k-201ENSMUST00000116774 122 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 Gm23172-201ENSMUST00000157160 124 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 Mir7241-201ENSMUST00000184532 64 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 Gm43865-201ENSMUST00000204721 127 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 Gm45197-201ENSMUST00000205288 151 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.39□□□□□ -2.03
Nubp1Q9R060 Gm25854-201ENSMUST00000082792 72 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 Gm26494-201ENSMUST00000083154 143 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 Gm24493-201ENSMUST00000083805 143 ntBASIC2.39□□□□□ -2.03
Nubp1Q9R060 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.38□□□□□ -2.03
Nubp1Q9R060 Gm24075-201ENSMUST00000158175 72 ntBASIC2.38□□□□□ -2.03
Nubp1Q9R060 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.38□□□□□ -2.03
Nubp1Q9R060 Gm23100-201ENSMUST00000083455 141 ntBASIC2.38□□□□□ -2.03
Nubp1Q9R060 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm25529-201ENSMUST00000104850 92 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm22732-201ENSMUST00000158093 121 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm22944-201ENSMUST00000158662 133 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm23419-201ENSMUST00000175523 84 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm22887-201ENSMUST00000178586 107 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm37807-201ENSMUST00000194310 190 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm25820-202ENSMUST00000197479 128 ntBASIC2.37□□□□□ -2.03
Nubp1Q9R060 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Nubp1Q9R060 Gm25542-201ENSMUST00000116889 94 ntBASIC2.36□□□□□ -2.03
Nubp1Q9R060 Gm23889-201ENSMUST00000122689 104 ntBASIC2.36□□□□□ -2.03
Nubp1Q9R060 Gm22522-201ENSMUST00000158271 151 ntBASIC2.36□□□□□ -2.03
Nubp1Q9R060 Gm25658-201ENSMUST00000158472 128 ntBASIC2.36□□□□□ -2.03
Nubp1Q9R060 Mir3569-201ENSMUST00000185080 58 ntBASIC2.36□□□□□ -2.03
Nubp1Q9R060 Mir7021-201ENSMUST00000197026 63 ntBASIC2.36□□□□□ -2.03
Nubp1Q9R060 Gm23293-201ENSMUST00000082552 104 ntBASIC2.36□□□□□ -2.03
Nubp1Q9R060 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm23528-201ENSMUST00000104571 132 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm23237-201ENSMUST00000104639 92 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm11694-201ENSMUST00000118637 159 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Mir1899-201ENSMUST00000122798 96 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm23170-201ENSMUST00000157158 106 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm23325-201ENSMUST00000157422 129 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm25642-201ENSMUST00000175137 66 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm24044-201ENSMUST00000083107 156 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.35□□□□□ -2.03
Nubp1Q9R060 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.34□□□□□ -2.03
Nubp1Q9R060 Gm25866-201ENSMUST00000158245 112 ntBASIC2.34□□□□□ -2.03
Nubp1Q9R060 Gm24736-201ENSMUST00000158862 130 ntBASIC2.34□□□□□ -2.03
Nubp1Q9R060 Snord60-201ENSMUST00000082834 78 ntBASIC2.34□□□□□ -2.03
Nubp1Q9R060 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.34□□□□□ -2.03
Nubp1Q9R060 Gm25650-201ENSMUST00000083784 162 ntBASIC2.34□□□□□ -2.03
Nubp1Q9R060 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Nubp1Q9R060 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.03
Nubp1Q9R060 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.04
Nubp1Q9R060 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Nubp1Q9R060 Gm26478-201ENSMUST00000122611 133 ntBASIC2.33□□□□□ -2.04
Nubp1Q9R060 Gm24728-201ENSMUST00000158226 125 ntBASIC2.33□□□□□ -2.04
Nubp1Q9R060 Gm24210-201ENSMUST00000158263 133 ntBASIC2.33□□□□□ -2.04
Nubp1Q9R060 Gm22929-201ENSMUST00000175517 107 ntBASIC2.33□□□□□ -2.04
Nubp1Q9R060 Gm23377-201ENSMUST00000082943 126 ntBASIC2.33□□□□□ -2.04
Nubp1Q9R060 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Nubp1Q9R060 Gm12469-201ENSMUST00000117623 207 ntBASIC2.32□□□□□ -2.04
Nubp1Q9R060 Gm24443-201ENSMUST00000157242 132 ntBASIC2.32□□□□□ -2.04
Nubp1Q9R060 Gm25958-201ENSMUST00000175114 71 ntBASIC2.32□□□□□ -2.04
Nubp1Q9R060 Gm25740-201ENSMUST00000180247 107 ntBASIC2.32□□□□□ -2.04
Nubp1Q9R060 Mir7226-201ENSMUST00000184953 60 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 235.1 ms