Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm25978-201ENSMUST00000158698 90 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm44325-201ENSMUST00000196757 77 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Mir411-201ENSMUST00000083543 82 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Mir880-201ENSMUST00000104809 78 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Gm23601-201ENSMUST00000157259 131 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Gm22963-201ENSMUST00000157960 91 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Gm22129-201ENSMUST00000179034 107 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Mir6985-201ENSMUST00000184641 61 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Gm24524-201ENSMUST00000082925 170 ntBASIC1.51□□□□□ -2.17
Shroom3Q9QXN0 Gm25112-201ENSMUST00000122680 104 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Mir7059-201ENSMUST00000184825 59 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm44807-201ENSMUST00000206115 154 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm45268-201ENSMUST00000210046 370 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm22950-201ENSMUST00000082776 107 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm24406-201ENSMUST00000083026 128 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Snora3-201ENSMUST00000083082 132 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm24049-201ENSMUST00000102409 100 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm15654-201ENSMUST00000152660 300 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm23996-201ENSMUST00000158062 131 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Gm23507-201ENSMUST00000083078 107 ntBASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Shroom3Q9QXN0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Gm25496-201ENSMUST00000104430 120 ntBASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Mir466l-201ENSMUST00000104866 121 ntBASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Gm29535-201ENSMUST00000185723 109 ntBASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Gm28143-201ENSMUST00000191082 109 ntBASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Gm24697-201ENSMUST00000083881 107 ntBASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Shroom3Q9QXN0 Gm25610-201ENSMUST00000104016 129 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm24851-201ENSMUST00000158028 103 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm23065-201ENSMUST00000158236 130 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm25949-201ENSMUST00000175333 114 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm27248-201ENSMUST00000184004 166 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Mir21c-201ENSMUST00000184910 78 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm22071-201ENSMUST00000116857 83 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Snord43-201ENSMUST00000199549 108 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm22454-201ENSMUST00000082583 107 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm24624-201ENSMUST00000082617 164 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm22251-201ENSMUST00000083216 107 ntBASIC1.48□□□□□ -2.17
Shroom3Q9QXN0 Gm25680-201ENSMUST00000116917 126 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Gm22635-201ENSMUST00000116962 126 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Gm26213-201ENSMUST00000158582 110 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Gm22469-201ENSMUST00000104118 133 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Gm23351-201ENSMUST00000158427 125 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Traj61-201ENSMUST00000165025 72 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Gm22354-201ENSMUST00000083919 70 ntBASIC1.47□□□□□ -2.17
Shroom3Q9QXN0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm23656-201ENSMUST00000122626 112 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm25045-201ENSMUST00000122670 99 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm22983-201ENSMUST00000158308 104 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm23410-201ENSMUST00000179967 107 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm22505-201ENSMUST00000082956 108 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm23790-201ENSMUST00000083013 107 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm22363-201ENSMUST00000083100 108 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm23814-201ENSMUST00000083230 102 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Gm22827-201ENSMUST00000083766 107 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Mir451a-201ENSMUST00000093557 72 ntBASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Shroom3Q9QXN0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm26090-201ENSMUST00000157897 128 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Mir3057-201ENSMUST00000175040 91 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm42795-201ENSMUST00000198847 76 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Mir211-201ENSMUST00000083651 106 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Snord80-201ENSMUST00000083801 81 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm25279-201ENSMUST00000122608 133 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm22319-201ENSMUST00000157147 122 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm22768-201ENSMUST00000158366 153 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm16539-201ENSMUST00000160086 327 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm25750-201ENSMUST00000175483 112 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Mir30f-201ENSMUST00000196073 92 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Gm42935-201ENSMUST00000202004 151 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.45□□□□□ -2.18
Shroom3Q9QXN0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Shroom3Q9QXN0 Gm24342-201ENSMUST00000103907 104 ntBASIC1.44□□□□□ -2.18
Shroom3Q9QXN0 Gm22999-201ENSMUST00000157082 88 ntBASIC1.44□□□□□ -2.18
Shroom3Q9QXN0 Gm22603-201ENSMUST00000157603 96 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 180.5 ms