Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm22850-201ENSMUST00000157714 82 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm23080-201ENSMUST00000157846 103 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm37586-201ENSMUST00000193654 204 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm44345-201ENSMUST00000199560 135 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Mir186-201ENSMUST00000083497 71 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm22576-201ENSMUST00000083733 104 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm25444-201ENSMUST00000158999 113 ntBASIC0.32□□□□□ -2.36
Scn4aQ9ER60 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.32□□□□□ -2.36
Scn4aQ9ER60 Gm23141-201ENSMUST00000178682 94 ntBASIC0.32□□□□□ -2.36
Scn4aQ9ER60 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.32□□□□□ -2.36
Scn4aQ9ER60 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.32□□□□□ -2.36
Scn4aQ9ER60 Mir721-201ENSMUST00000200230 88 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Mir377-201ENSMUST00000083504 68 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm22489-201ENSMUST00000116813 62 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm24238-201ENSMUST00000157792 98 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm25364-201ENSMUST00000158851 107 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm16550-201ENSMUST00000162550 126 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm23003-201ENSMUST00000179948 107 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm38019-201ENSMUST00000195133 380 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Mir200a-201ENSMUST00000083466 90 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm25223-201ENSMUST00000158200 110 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm27446-201ENSMUST00000183963 89 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm28435-201ENSMUST00000185496 108 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm37116-201ENSMUST00000195161 147 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm26156-201ENSMUST00000116999 123 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm23989-201ENSMUST00000117030 66 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm22706-201ENSMUST00000157907 112 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm27402-201ENSMUST00000183890 120 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Mir532-201ENSMUST00000093630 96 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm25611-201ENSMUST00000104017 133 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Mir6365-201ENSMUST00000183990 101 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm22101-201ENSMUST00000157928 103 ntBASIC0.28□□□□□ -2.36
Scn4aQ9ER60 Gm22942-201ENSMUST00000158563 124 ntBASIC0.28□□□□□ -2.36
Scn4aQ9ER60 Gm27717-201ENSMUST00000183933 151 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Mir6390-201ENSMUST00000184405 129 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm37889-201ENSMUST00000194174 251 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm25882-201ENSMUST00000157784 85 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm27934-201ENSMUST00000158795 63 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm27735-201ENSMUST00000185085 76 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm26303-201ENSMUST00000116845 119 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Mir1899-201ENSMUST00000122798 96 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm23857-201ENSMUST00000158379 111 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm20409-201ENSMUST00000173457 130 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm27943-201ENSMUST00000184844 116 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Mir3969-201ENSMUST00000197106 92 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm23761-201ENSMUST00000158347 104 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm22239-201ENSMUST00000175220 103 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Mir670-201ENSMUST00000102380 100 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23881-201ENSMUST00000116872 66 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25248-201ENSMUST00000175473 98 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23416-201ENSMUST00000175520 95 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23770-201ENSMUST00000178009 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm22832-201ENSMUST00000178022 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23863-201ENSMUST00000178265 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm24828-201ENSMUST00000178507 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23052-201ENSMUST00000178633 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25729-201ENSMUST00000179050 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25359-201ENSMUST00000179315 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm22624-201ENSMUST00000179913 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23378-201ENSMUST00000082942 107 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25141-201ENSMUST00000083177 107 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm24296-201ENSMUST00000158297 106 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm24321-201ENSMUST00000175348 80 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm24488-201ENSMUST00000179934 127 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm25701-201ENSMUST00000179988 127 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm26431-201ENSMUST00000180199 127 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Snord60-201ENSMUST00000082834 78 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Mir411-201ENSMUST00000083543 82 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Mir669g-201ENSMUST00000116809 123 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Gm22541-201ENSMUST00000158165 127 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Snord49b-201ENSMUST00000082503 72 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Gm22303-201ENSMUST00000082686 122 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Gm12469-201ENSMUST00000117623 207 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Mir3108-201ENSMUST00000175500 79 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm22790-201ENSMUST00000157229 129 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm10548-202ENSMUST00000165672 272 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm25300-201ENSMUST00000175284 84 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm27475-201ENSMUST00000183420 61 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Mir7065-201ENSMUST00000185110 61 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Mir466e-201ENSMUST00000198862 84 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm45002-201ENSMUST00000208045 120 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Snord61-201ENSMUST00000083176 71 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm22946-201ENSMUST00000158558 82 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm23567-201ENSMUST00000178005 107 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Snord95-201ENSMUST00000082846 68 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm22368-201ENSMUST00000102416 109 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 178.2 ms