Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Mir6995-201ENSMUST00000183658 71 ntBASIC1.78□□□□□ -2.12
Rnft1Q9DCN7 Mir7683-201ENSMUST00000183842 61 ntBASIC1.78□□□□□ -2.12
Rnft1Q9DCN7 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Rnft1Q9DCN7 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm12941-201ENSMUST00000117934 220 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm25329-201ENSMUST00000158041 126 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm22803-201ENSMUST00000158049 283 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm23838-201ENSMUST00000158067 162 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm25011-201ENSMUST00000158398 126 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm16550-201ENSMUST00000162550 126 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm25949-201ENSMUST00000175333 114 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm25750-201ENSMUST00000175483 112 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm24151-201ENSMUST00000082758 141 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Snora3-201ENSMUST00000083082 132 ntBASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Rnft1Q9DCN7 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.76□□□□□ -2.13
Rnft1Q9DCN7 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.76□□□□□ -2.13
Rnft1Q9DCN7 Mir8116-201ENSMUST00000184134 97 ntBASIC1.76□□□□□ -2.13
Rnft1Q9DCN7 Gm44408-201ENSMUST00000200205 66 ntBASIC1.76□□□□□ -2.13
Rnft1Q9DCN7 Snord80-201ENSMUST00000083801 81 ntBASIC1.76□□□□□ -2.13
Rnft1Q9DCN7 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Rnft1Q9DCN7 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Rnft1Q9DCN7 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.75□□□□□ -2.13
Rnft1Q9DCN7 Gm45471-201ENSMUST00000211270 281 ntBASIC1.75□□□□□ -2.13
Rnft1Q9DCN7 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Rnft1Q9DCN7 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Mir654-201ENSMUST00000104787 84 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Gm23351-201ENSMUST00000158427 125 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Gm22425-201ENSMUST00000158532 138 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Gm24880-201ENSMUST00000158776 85 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Gm16539-201ENSMUST00000160086 327 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Mir7017-201ENSMUST00000184894 62 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Mir7021-201ENSMUST00000197026 63 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Mir322-201ENSMUST00000083484 95 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Gm24523-201ENSMUST00000083965 132 ntBASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.74□□□□□ -2.13
Rnft1Q9DCN7 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Gm23172-201ENSMUST00000157160 124 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Gm22515-201ENSMUST00000158273 305 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Gm25838-201ENSMUST00000158920 120 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Snora24-201ENSMUST00000174989 130 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Snord87-201ENSMUST00000175437 87 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Mir7678-201ENSMUST00000185076 71 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Gm37579-201ENSMUST00000194291 142 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Gm25337-201ENSMUST00000083723 104 ntBASIC1.73□□□□□ -2.13
Rnft1Q9DCN7 Gm26425-201ENSMUST00000122529 82 ntBASIC1.72□□□□□ -2.13
Rnft1Q9DCN7 Gm25112-201ENSMUST00000122680 104 ntBASIC1.72□□□□□ -2.13
Rnft1Q9DCN7 Gm25044-201ENSMUST00000158603 104 ntBASIC1.72□□□□□ -2.13
Rnft1Q9DCN7 Gm27511-201ENSMUST00000183502 127 ntBASIC1.72□□□□□ -2.13
Rnft1Q9DCN7 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.72□□□□□ -2.13
Rnft1Q9DCN7 Mir20b-201ENSMUST00000102087 80 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Mir802-201ENSMUST00000103258 97 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Gm15654-201ENSMUST00000152660 300 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Gm23261-201ENSMUST00000158316 136 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Gm24177-201ENSMUST00000158927 131 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Gm22503-201ENSMUST00000158983 115 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Gm25730-201ENSMUST00000178753 165 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Mir7225-201ENSMUST00000184178 54 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Gm23100-201ENSMUST00000083455 141 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Mir222-201ENSMUST00000083537 79 ntBASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
Rnft1Q9DCN7 Gm23950-201ENSMUST00000104026 129 ntBASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 Gm22672-201ENSMUST00000104414 134 ntBASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 U6.1-201ENSMUST00000157443 101 ntBASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 Gm22386-201ENSMUST00000158192 129 ntBASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 Gm20391-201ENSMUST00000174722 106 ntBASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 Gm26398-201ENSMUST00000179015 127 ntBASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 Gm25449-201ENSMUST00000179389 79 ntBASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.7□□□□□ -2.14
Rnft1Q9DCN7 Gm22983-201ENSMUST00000158308 104 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Gm24946-201ENSMUST00000158332 106 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Gm22200-201ENSMUST00000158614 67 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Gm27898-201ENSMUST00000183987 80 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Mir6997-201ENSMUST00000184313 71 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Trbv25-201ENSMUST00000194700 273 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Gm25038-201ENSMUST00000082928 130 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Gm22723-201ENSMUST00000083820 129 ntBASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Rnft1Q9DCN7 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Mir223-201ENSMUST00000102112 110 ntBASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Mir3096-201ENSMUST00000116685 71 ntBASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm23208-201ENSMUST00000158666 127 ntBASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm20118-201ENSMUST00000187207 162 ntBASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Rnft1Q9DCN7 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 153.2 ms